RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 SF3A1Q15459 793 aaKnown RBP4.84□□□□□ -1.63
UBE3A-202ENST00000397954 LDLRAD1Q5T700 205 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 FAM200AQ8TCP9 573 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 LTV1Q96GA3 475 aaPredicted RBP4.84□□□□□ -1.63
UBE3A-202ENST00000397954 FAM161BQ96MY7 647 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 HDAC5Q9UQL6 1122 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 ADCY9O60503 1353 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 KLRG2A4D1S0 409 aaPredicted RBP4.84□□□□□ -1.63
UBE3A-202ENST00000397954 SLC34A2O95436 690 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 U2AF1L5P0DN76 240 aaPredicted RBP4.84□□□□□ -1.63
UBE3A-202ENST00000397954 EIF5P55010 431 aaKnown RBP4.84□□□□□ -1.63
UBE3A-202ENST00000397954 U2AF1Q01081 240 aaKnown RBP eCLIP4.84□□□□□ -1.632e-7■■■■□ 25
UBE3A-202ENST00000397954 CC2D1BQ5T0F9 858 aaKnown RBP4.84□□□□□ -1.63
UBE3A-202ENST00000397954 STYK1Q6J9G0 422 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 SLF2Q8IX21 1173 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 ZDHHC16Q969W1 377 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 TFCP2L1Q9NZI6 479 aa4.84□□□□□ -1.63
UBE3A-202ENST00000397954 LTBP1Q14766 1721 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 BTBD11A6QL63 1104 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 ZNF853P0CG23 659 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 RAD51AP2Q09MP3 1159 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 DPYDQ12882 1025 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 CAPN12Q6ZSI9 719 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 DEFB132Q7Z7B7 95 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 BRPF3Q9ULD4 1205 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 CDHR2Q9BYE9 1310 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 ECM29Q5VYK3 1845 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 CHL1O00533 1208 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 BRD2P25440 801 aaKnown RBP4.83□□□□□ -1.64
UBE3A-202ENST00000397954 DNAJB2P25686 324 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 PDE6BP35913 854 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 TMPOP42166 694 aaKnown RBP4.83□□□□□ -1.64
UBE3A-202ENST00000397954 TRIM28Q13263 835 aaKnown RBP4.83□□□□□ -1.64
UBE3A-202ENST00000397954 ECM1Q16610 540 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 PIK3R5Q8WYR1 880 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 LNPKQ9C0E8 428 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 HYPKQ9NX55 129 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 PCDHGA4Q9Y5G9 962 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 PARP3Q9Y6F1 533 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 ZPR1O75312 459 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 NCLP19338 710 aaKnown RBP4.83□□□□□ -1.64
UBE3A-202ENST00000397954 RFC4P35249 363 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 GCGRP47871 477 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 CLDN10P78369 228 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 LINC00116Q8NCU8 138 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 DHX38Q92620 1227 aaKnown RBP4.83□□□□□ -1.64
UBE3A-202ENST00000397954 PRIMPOLQ96LW4 560 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 TANGO6Q9C0B7 1094 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 LRRC4BQ9NT99 713 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 RNF19AQ9NV58 838 aa4.83□□□□□ -1.64
UBE3A-202ENST00000397954 U2SURPO15042 1029 aaKnown RBP4.82□□□□□ -1.64
UBE3A-202ENST00000397954 SLC10A3P09131 477 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 TM4SF1P30408 202 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 CRKLP46109 303 aaKnown RBP4.82□□□□□ -1.64
UBE3A-202ENST00000397954 R3HDM1Q15032 1099 aaKnown RBP4.82□□□□□ -1.64
UBE3A-202ENST00000397954 ZNF827Q17R98 1081 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 INTS5Q6P9B9 1019 aaKnown RBP4.82□□□□□ -1.64
UBE3A-202ENST00000397954 MPRIPQ6WCQ1 1025 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 ANKMY2Q8IV38 441 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 MYH16Q9H6N6 1097 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 ST5P78524 1137 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 KIF6Q6ZMV9 814 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 GLYCTKQ8IVS8 523 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 IL17REQ8NFR9 667 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 SEPT3Q9UH03 358 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.82□□□□□ -1.64
UBE3A-202ENST00000397954 COLQQ9Y215 455 aaPredicted RBP4.82□□□□□ -1.64
UBE3A-202ENST00000397954 THSD7BQ9C0I4 1608 aa4.82□□□□□ -1.64
UBE3A-202ENST00000397954 MARCH6O60337 910 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 DDX58O95786 925 aaKnown RBP4.81□□□□□ -1.64
UBE3A-202ENST00000397954 PLCG2P16885 1265 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 EIF4A1P60842 406 aaKnown RBP4.81□□□□□ -1.64
UBE3A-202ENST00000397954 NR1H3Q13133 447 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 NT5DC4Q86YG4 428 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 USHBP1Q8N6Y0 703 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 GPATCH3Q96I76 525 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 BRIP1Q9BX63 1249 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 IQSEC3Q9UPP2 1182 aaPredicted RBP4.81□□□□□ -1.64
UBE3A-202ENST00000397954 KIAA1024Q9UPX6 916 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 MAP3K15Q6ZN16 1313 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 ARHGAP4P98171 946 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 MRPL58Q14197 206 aaKnown RBP4.81□□□□□ -1.64
UBE3A-202ENST00000397954 OCLNQ16625 522 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 SLC10A5Q5PT55 438 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 TMED8Q6PL24 325 aaPredicted RBP4.81□□□□□ -1.64
UBE3A-202ENST00000397954 PPP1R42Q7Z4L9 355 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 COL23A1Q86Y22 540 aaPredicted RBP4.81□□□□□ -1.64
UBE3A-202ENST00000397954 PLEKHM2Q8IWE5 1019 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 OGFOD1Q8N543 542 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 NFATC2IPQ8NCF5 419 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 SUPT20HQ8NEM7 779 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 KHSRPQ92945 711 aaKnown RBP eCLIP4.81□□□□□ -1.641e-6■■□□□ 14.4
UBE3A-202ENST00000397954 CNKSR1Q969H4 720 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 ACSBG1Q96GR2 724 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 ASB16Q96NS5 453 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 MKNK1Q9BUB5 465 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 DDX21Q9NR30 783 aaKnown RBP eCLIP4.81□□□□□ -1.64
UBE3A-202ENST00000397954 DBF4Q9UBU7 674 aaPredicted RBP4.81□□□□□ -1.64
UBE3A-202ENST00000397954 PNMA3Q9UL41 463 aa4.81□□□□□ -1.64
UBE3A-202ENST00000397954 ADAMTSL1Q8N6G6 1762 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms