RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 ITGA6P23229 1130 aa18.21■□□□□ 0.51
SNRNP25-203ENST00000397876 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
SNRNP25-203ENST00000397876 FAM161AQ3B820 660 aa18.21■□□□□ 0.51
SNRNP25-203ENST00000397876 GMLQ99445 158 aa18.21■□□□□ 0.51
SNRNP25-203ENST00000397876 LEMD3Q9Y2U8 911 aa18.21■□□□□ 0.51
SNRNP25-203ENST00000397876 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.5
SNRNP25-203ENST00000397876 CASP7P55210 303 aa18.2■□□□□ 0.5
SNRNP25-203ENST00000397876 SCARF1Q14162 830 aa18.2■□□□□ 0.5
SNRNP25-203ENST00000397876 ANGEL2Q5VTE6 544 aaKnown RBP18.2■□□□□ 0.5
SNRNP25-203ENST00000397876 RGMBQ6NW40 437 aa18.2■□□□□ 0.5
SNRNP25-203ENST00000397876 MPHOSPH8Q99549 860 aa18.2■□□□□ 0.5
SNRNP25-203ENST00000397876 ANKRD2Q9GZV1 360 aa18.2■□□□□ 0.5
SNRNP25-203ENST00000397876 MYOZ2Q9NPC6 264 aa18.2■□□□□ 0.5
SNRNP25-203ENST00000397876 TSKSQ9UJT2 592 aa18.2■□□□□ 0.5
SNRNP25-203ENST00000397876 ASTN2O75129 1339 aaPredicted RBP18.2■□□□□ 0.5
SNRNP25-203ENST00000397876 WTIPA6NIX2 430 aaPredicted RBP18.19■□□□□ 0.5
SNRNP25-203ENST00000397876 FBXW7Q969H0 707 aa18.19■□□□□ 0.5
SNRNP25-203ENST00000397876 CDCA5Q96FF9 252 aa18.19■□□□□ 0.5
SNRNP25-203ENST00000397876 COA1Q9GZY4 146 aa18.19■□□□□ 0.5
SNRNP25-203ENST00000397876 MYO3BQ8WXR4 1341 aa18.19■□□□□ 0.5
SNRNP25-203ENST00000397876 CSF1RP07333 972 aa18.18■□□□□ 0.5
SNRNP25-203ENST00000397876 CCDC102AQ96A19 550 aa18.18■□□□□ 0.5
SNRNP25-203ENST00000397876 ZNF804BA4D1E1 1349 aa18.18■□□□□ 0.5
SNRNP25-203ENST00000397876 PITPNM2Q9BZ72 1349 aa18.18■□□□□ 0.5
SNRNP25-203ENST00000397876 ANKRD18BA2A2Z9 1011 aa18.17■□□□□ 0.5
SNRNP25-203ENST00000397876 KCNJ4P48050 445 aa18.17■□□□□ 0.5
SNRNP25-203ENST00000397876 ZNF157P51786 506 aaPredicted RBP18.17■□□□□ 0.5
SNRNP25-203ENST00000397876 DACT2Q5SW24 774 aa18.17■□□□□ 0.5
SNRNP25-203ENST00000397876 STRIP1Q5VSL9 837 aa18.17■□□□□ 0.5
SNRNP25-203ENST00000397876 OGFOD1Q8N543 542 aa18.17■□□□□ 0.5
SNRNP25-203ENST00000397876 ABHD8Q96I13 439 aa18.17■□□□□ 0.5
SNRNP25-203ENST00000397876 ZNF646O15015 1829 aaPredicted RBP18.16■□□□□ 0.5
SNRNP25-203ENST00000397876 FAM9BQ8IZU0 186 aa18.16■□□□□ 0.5
SNRNP25-203ENST00000397876 PAPPA2Q9BXP8 1791 aa18.15■□□□□ 0.5
SNRNP25-203ENST00000397876 FAM155AB1AL88 458 aaPredicted RBP18.15■□□□□ 0.5
SNRNP25-203ENST00000397876 F6X3S4 739 aa18.15■□□□□ 0.5
SNRNP25-203ENST00000397876 CHRNDQ07001 517 aa18.15■□□□□ 0.5
SNRNP25-203ENST00000397876 IFIT5Q13325 482 aaKnown RBP18.15■□□□□ 0.5
SNRNP25-203ENST00000397876 TXNRD3Q86VQ6 643 aa18.15■□□□□ 0.5
SNRNP25-203ENST00000397876 ZIC5Q96T25 663 aa18.15■□□□□ 0.5
SNRNP25-203ENST00000397876 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
SNRNP25-203ENST00000397876 CHMP3Q9Y3E7 222 aa18.15■□□□□ 0.5
SNRNP25-203ENST00000397876 KLRK1P26718 216 aa18.14■□□□□ 0.49
SNRNP25-203ENST00000397876 FKBP1BP68106 108 aa18.14■□□□□ 0.49
SNRNP25-203ENST00000397876 BEND3Q5T5X7 828 aa18.14■□□□□ 0.49
SNRNP25-203ENST00000397876 MXD3Q9BW11 206 aa18.14■□□□□ 0.49
SNRNP25-203ENST00000397876 SLC10A3P09131 477 aa18.13■□□□□ 0.49
SNRNP25-203ENST00000397876 MMP14P50281 582 aa18.13■□□□□ 0.49
SNRNP25-203ENST00000397876 FOXO4P98177 505 aa18.12■□□□□ 0.49
SNRNP25-203ENST00000397876 KIF23Q02241 960 aaPredicted RBP18.12■□□□□ 0.49
SNRNP25-203ENST00000397876 NBPF9Q3BBW0 867 aa18.12■□□□□ 0.49
SNRNP25-203ENST00000397876 TTLL5Q6EMB2 1281 aa18.12■□□□□ 0.49
SNRNP25-203ENST00000397876 SAGE1Q9NXZ1 904 aa18.12■□□□□ 0.49
SNRNP25-203ENST00000397876 HDAC9Q9UKV0 1011 aa18.12■□□□□ 0.49
SNRNP25-203ENST00000397876 A0A1B0GUL6 1792 aa18.12■□□□□ 0.49
SNRNP25-203ENST00000397876 GRM8O00222 908 aa18.11■□□□□ 0.49
SNRNP25-203ENST00000397876 WNT10BO00744 389 aa18.11■□□□□ 0.49
SNRNP25-203ENST00000397876 GTF2IP78347 998 aa18.11■□□□□ 0.49
SNRNP25-203ENST00000397876 TAF7LQ5H9L4 462 aa18.11■□□□□ 0.49
SNRNP25-203ENST00000397876 SASH1O94885 1247 aa18.1■□□□□ 0.49
SNRNP25-203ENST00000397876 NF2P35240 595 aa18.1■□□□□ 0.49
SNRNP25-203ENST00000397876 CCDC57Q2TAC2 916 aa18.1■□□□□ 0.49
SNRNP25-203ENST00000397876 LMBR1LQ6UX01 489 aa18.1■□□□□ 0.49
SNRNP25-203ENST00000397876 RASAL3Q86YV0 1011 aa18.1■□□□□ 0.49
SNRNP25-203ENST00000397876 KIAA0825Q8IV33 1275 aa18.1■□□□□ 0.49
SNRNP25-203ENST00000397876 CD209Q9NNX6 404 aa18.1■□□□□ 0.49
SNRNP25-203ENST00000397876 C9orf78Q9NZ63 289 aaPredicted RBP18.1■□□□□ 0.49
SNRNP25-203ENST00000397876 SCAF8Q9UPN6 1271 aaKnown RBP18.1■□□□□ 0.49
SNRNP25-203ENST00000397876 TAF5LO75529 589 aa18.09■□□□□ 0.49
SNRNP25-203ENST00000397876 ALDH1L1O75891 902 aa18.09■□□□□ 0.49
SNRNP25-203ENST00000397876 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
SNRNP25-203ENST00000397876 C15orf52Q6ZUT6 534 aaKnown RBP18.09■□□□□ 0.49
SNRNP25-203ENST00000397876 ZNF804AQ7Z570 1209 aa18.09■□□□□ 0.49
SNRNP25-203ENST00000397876 HELBQ8NG08 1087 aaPredicted RBP18.09■□□□□ 0.49
SNRNP25-203ENST00000397876 SRCIN1Q9C0H9 1055 aa18.09■□□□□ 0.49
SNRNP25-203ENST00000397876 CASP8AP2Q9UKL3 1982 aa18.09■□□□□ 0.49
SNRNP25-203ENST00000397876 IRS2Q9Y4H2 1338 aa18.08■□□□□ 0.49
SNRNP25-203ENST00000397876 TTLL12Q14166 644 aaPredicted RBP18.08■□□□□ 0.48
SNRNP25-203ENST00000397876 APOBEC3FQ8IUX4 373 aaKnown RBP18.08■□□□□ 0.48
SNRNP25-203ENST00000397876 REM2Q8IYK8 340 aaPredicted RBP18.08■□□□□ 0.48
SNRNP25-203ENST00000397876 MCOLN1Q9GZU1 580 aa18.08■□□□□ 0.48
SNRNP25-203ENST00000397876 CCDC85CA6NKD9 419 aa18.07■□□□□ 0.48
SNRNP25-203ENST00000397876 SNAP23O00161 211 aa18.07■□□□□ 0.48
SNRNP25-203ENST00000397876 EPHA10Q5JZY3 1008 aa18.07■□□□□ 0.48
SNRNP25-203ENST00000397876 PRAMEF18Q5VWM3 479 aa18.07■□□□□ 0.48
SNRNP25-203ENST00000397876 LDHAL6AQ6ZMR3 332 aa18.07■□□□□ 0.48
SNRNP25-203ENST00000397876 CNNM1Q9NRU3 951 aa18.07■□□□□ 0.48
SNRNP25-203ENST00000397876 AKAP11Q9UKA4 1901 aa18.07■□□□□ 0.48
SNRNP25-203ENST00000397876 ZNF521Q96K83 1311 aa18.06■□□□□ 0.48
SNRNP25-203ENST00000397876 TRPA1O75762 1119 aa18.06■□□□□ 0.48
SNRNP25-203ENST00000397876 DGKZQ13574 1117 aa18.06■□□□□ 0.48
SNRNP25-203ENST00000397876 MOB2Q70IA6 237 aa18.06■□□□□ 0.48
SNRNP25-203ENST00000397876 ZNF594Q96JF6 807 aaPredicted RBP18.06■□□□□ 0.48
SNRNP25-203ENST00000397876 CSRNP1Q96S65 589 aa18.06■□□□□ 0.48
SNRNP25-203ENST00000397876 RNF186Q9NXI6 227 aa18.06■□□□□ 0.48
SNRNP25-203ENST00000397876 COL1A1P02452 1464 aaPredicted RBP18.06■□□□□ 0.48
SNRNP25-203ENST00000397876 UBE2Q2LH0YL09 131 aa18.05■□□□□ 0.48
SNRNP25-203ENST00000397876 PLIN1O60240 522 aa18.05■□□□□ 0.48
SNRNP25-203ENST00000397876 IL1R1P14778 569 aa18.05■□□□□ 0.48
SNRNP25-203ENST00000397876 DLGAP5Q15398 846 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms