RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CCT2P78371 535 aaKnown RBP21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 HSP90AB3PQ58FF7 597 aa21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 IFFO2Q5TF58 517 aa21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 PI16Q6UXB8 463 aa21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 SCAND2PQ9GZW5 306 aaPredicted RBP21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 ZNF500O60304 480 aaPredicted RBP21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 STARD3NLO95772 234 aa21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 PLCB2Q00722 1185 aa21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 IFIT5Q13325 482 aaKnown RBP21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 ZBTB38Q8NAP3 1195 aaPredicted RBP21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 LEO1Q8WVC0 666 aaPredicted RBP21.65■■□□□ 1.06
CHRFAM7A-202ENST00000397827 ADCY5O95622 1261 aa21.64■■□□□ 1.05
CHRFAM7A-202ENST00000397827 TRIM28Q13263 835 aaKnown RBP21.64■■□□□ 1.05
CHRFAM7A-202ENST00000397827 GOLGA6L4A6NEF3 574 aa21.64■■□□□ 1.05
CHRFAM7A-202ENST00000397827 EXOSC10Q01780 885 aaKnown RBP21.64■■□□□ 1.05
CHRFAM7A-202ENST00000397827 WASHC4Q2M389 1173 aa21.64■■□□□ 1.05
CHRFAM7A-202ENST00000397827 NCOA5Q9HCD5 579 aaKnown RBP21.64■■□□□ 1.05
CHRFAM7A-202ENST00000397827 PFKFB2O60825 505 aa21.63■■□□□ 1.05
CHRFAM7A-202ENST00000397827 TEX13AQ9BXU3 409 aaPredicted RBP21.63■■□□□ 1.05
CHRFAM7A-202ENST00000397827 AKAP2Q9Y2D5 859 aa21.63■■□□□ 1.05
CHRFAM7A-202ENST00000397827 CTDNEP1O95476 244 aa21.63■■□□□ 1.05
CHRFAM7A-202ENST00000397827 RESTQ13127 1097 aa21.63■■□□□ 1.05
CHRFAM7A-202ENST00000397827 NSUN7Q8NE18 718 aaKnown RBP21.63■■□□□ 1.05
CHRFAM7A-202ENST00000397827 DACT1Q9NYF0 836 aa21.63■■□□□ 1.05
CHRFAM7A-202ENST00000397827 CSF1RP07333 972 aa21.62■■□□□ 1.05
CHRFAM7A-202ENST00000397827 ZAP70P43403 619 aa21.62■■□□□ 1.05
CHRFAM7A-202ENST00000397827 HAND2P61296 217 aa21.62■■□□□ 1.05
CHRFAM7A-202ENST00000397827 SMARCC2Q8TAQ2 1214 aa21.62■■□□□ 1.05
CHRFAM7A-202ENST00000397827 SLC4A9Q96Q91 983 aa21.62■■□□□ 1.05
CHRFAM7A-202ENST00000397827 NUP62CLQ9H1M0 184 aa21.62■■□□□ 1.05
CHRFAM7A-202ENST00000397827 MAP3K15Q6ZN16 1313 aa21.62■■□□□ 1.05
CHRFAM7A-202ENST00000397827 GIGYF2Q6Y7W6 1299 aaKnown RBP21.62■■□□□ 1.05
CHRFAM7A-202ENST00000397827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.62■■□□□ 1.05
CHRFAM7A-202ENST00000397827 SYTL4Q96C24 671 aaPredicted RBP21.62■■□□□ 1.05
CHRFAM7A-202ENST00000397827 GTF2E1P29083 439 aaPredicted RBP21.61■■□□□ 1.05
CHRFAM7A-202ENST00000397827 CEBPZQ03701 1054 aaKnown RBP21.61■■□□□ 1.05
CHRFAM7A-202ENST00000397827 ZNF830Q96NB3 372 aaPredicted RBP21.61■■□□□ 1.05
CHRFAM7A-202ENST00000397827 GREM2Q9H772 168 aa21.61■■□□□ 1.05
CHRFAM7A-202ENST00000397827 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.61■■□□□ 1.05
CHRFAM7A-202ENST00000397827 UQCRHLA0A096LP55 91 aa21.61■■□□□ 1.05
CHRFAM7A-202ENST00000397827 UQCRHP07919 91 aa21.61■■□□□ 1.05
CHRFAM7A-202ENST00000397827 CKAP2LQ8IYA6 745 aa21.61■■□□□ 1.05
CHRFAM7A-202ENST00000397827 PGBD1Q96JS3 809 aa21.61■■□□□ 1.05
CHRFAM7A-202ENST00000397827 PTPDC1A2A3K4 754 aa21.6■■□□□ 1.05
CHRFAM7A-202ENST00000397827 FOXP2O15409 715 aa21.6■■□□□ 1.05
CHRFAM7A-202ENST00000397827 KDM4AO75164 1064 aa21.6■■□□□ 1.05
CHRFAM7A-202ENST00000397827 PLA2G12BQ9BX93 195 aa21.6■■□□□ 1.05
CHRFAM7A-202ENST00000397827 CCDC192P0DO97 292 aa21.6■■□□□ 1.05
CHRFAM7A-202ENST00000397827 ITGA6P23229 1130 aa21.6■■□□□ 1.05
CHRFAM7A-202ENST00000397827 LDHAL6AQ6ZMR3 332 aa21.6■■□□□ 1.05
CHRFAM7A-202ENST00000397827 NLRP10Q86W26 655 aa21.6■■□□□ 1.05
CHRFAM7A-202ENST00000397827 AGXT2Q9BYV1 514 aa21.6■■□□□ 1.05
CHRFAM7A-202ENST00000397827 GPHNQ9NQX3 736 aaPredicted RBP21.6■■□□□ 1.05
CHRFAM7A-202ENST00000397827 AP5Z1O43299 807 aa21.59■■□□□ 1.05
CHRFAM7A-202ENST00000397827 MCM5P33992 734 aa21.59■■□□□ 1.05
CHRFAM7A-202ENST00000397827 MAP3K11Q16584 847 aa21.59■■□□□ 1.05
CHRFAM7A-202ENST00000397827 METTL24Q5JXM2 366 aa21.59■■□□□ 1.05
CHRFAM7A-202ENST00000397827 PUS7LQ9H0K6 701 aaKnown RBP21.59■■□□□ 1.05
CHRFAM7A-202ENST00000397827 TTLL11Q8NHH1 800 aa21.59■■□□□ 1.05
CHRFAM7A-202ENST00000397827 FBXO3Q9UK99 471 aa21.59■■□□□ 1.05
CHRFAM7A-202ENST00000397827 ZBTB1Q9Y2K1 713 aa21.59■■□□□ 1.05
CHRFAM7A-202ENST00000397827 BICD2Q8TD16 824 aa21.59■■□□□ 1.05
CHRFAM7A-202ENST00000397827 LLPHQ9BRT6 129 aaKnown RBP21.59■■□□□ 1.05
CHRFAM7A-202ENST00000397827 NR1I2O75469 434 aa21.58■■□□□ 1.05
CHRFAM7A-202ENST00000397827 PDIA3P30101 505 aaKnown RBP21.58■■□□□ 1.05
CHRFAM7A-202ENST00000397827 DMTNQ08495 405 aa21.58■■□□□ 1.05
CHRFAM7A-202ENST00000397827 ATP2B3Q16720 1220 aa21.58■■□□□ 1.05
CHRFAM7A-202ENST00000397827 TICAM2Q86XR7 235 aa21.58■■□□□ 1.05
CHRFAM7A-202ENST00000397827 TNMDQ9H2S6 317 aa21.58■■□□□ 1.05
CHRFAM7A-202ENST00000397827 RIPOR2Q9Y4F9 1068 aa21.58■■□□□ 1.05
CHRFAM7A-202ENST00000397827 FTOQ9C0B1 505 aaKnown RBP eCLIP21.58■■□□□ 1.04
CHRFAM7A-202ENST00000397827 ITGB4P16144 1822 aa21.57■■□□□ 1.04
CHRFAM7A-202ENST00000397827 FGAP02671 866 aa21.57■■□□□ 1.04
CHRFAM7A-202ENST00000397827 CYP19A1P11511 503 aaPredicted RBP21.57■■□□□ 1.04
CHRFAM7A-202ENST00000397827 GUCY1B3Q02153 619 aa21.57■■□□□ 1.04
CHRFAM7A-202ENST00000397827 MTERF4Q7Z6M4 381 aaKnown RBP21.57■■□□□ 1.04
CHRFAM7A-202ENST00000397827 SPEF2Q9C093 1822 aa21.57■■□□□ 1.04
CHRFAM7A-202ENST00000397827 RIC1Q4ADV7 1423 aa21.57■■□□□ 1.04
CHRFAM7A-202ENST00000397827 UTP14CQ5TAP6 766 aaKnown RBP21.57■■□□□ 1.04
CHRFAM7A-202ENST00000397827 ZSCAN16Q9H4T2 348 aaPredicted RBP21.57■■□□□ 1.04
CHRFAM7A-202ENST00000397827 TBC1D2BQ9UPU7 963 aa21.57■■□□□ 1.04
CHRFAM7A-202ENST00000397827 MCAMP43121 646 aa21.56■■□□□ 1.04
CHRFAM7A-202ENST00000397827 CNNM1Q9NRU3 951 aa21.56■■□□□ 1.04
CHRFAM7A-202ENST00000397827 TRMT112Q9UI30 125 aaKnown RBP21.56■■□□□ 1.04
CHRFAM7A-202ENST00000397827 IRS4O14654 1257 aaPredicted RBP21.56■■□□□ 1.04
CHRFAM7A-202ENST00000397827 TYRO3Q06418 890 aa21.56■■□□□ 1.04
CHRFAM7A-202ENST00000397827 LRRFIP1Q32MZ4 808 aaKnown RBP21.56■■□□□ 1.04
CHRFAM7A-202ENST00000397827 TTC12Q9H892 705 aaPredicted RBP21.56■■□□□ 1.04
CHRFAM7A-202ENST00000397827 MRVI1Q9Y6F6 885 aa21.56■■□□□ 1.04
CHRFAM7A-202ENST00000397827 CTSWP56202 376 aa21.55■■□□□ 1.04
CHRFAM7A-202ENST00000397827 ZFYP08048 801 aaPredicted RBP21.55■■□□□ 1.04
CHRFAM7A-202ENST00000397827 HMGN5P82970 282 aaKnown RBP21.55■■□□□ 1.04
CHRFAM7A-202ENST00000397827 IMMTQ16891 758 aaKnown RBP21.55■■□□□ 1.04
CHRFAM7A-202ENST00000397827 APPBP2Q92624 585 aa21.55■■□□□ 1.04
CHRFAM7A-202ENST00000397827 CDHR2Q9BYE9 1310 aa21.54■■□□□ 1.04
CHRFAM7A-202ENST00000397827 ADD1P35611 737 aaKnown RBP21.54■■□□□ 1.04
CHRFAM7A-202ENST00000397827 BCL9O00512 1426 aa21.54■■□□□ 1.04
CHRFAM7A-202ENST00000397827 ANKRD18BA2A2Z9 1011 aa21.54■■□□□ 1.04
CHRFAM7A-202ENST00000397827 ZNF274Q96GC6 653 aaPredicted RBP21.54■■□□□ 1.04
CHRFAM7A-202ENST00000397827 DDX19AQ9NUU7 478 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms