RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ESYT1Q9BSJ8 1104 aa23.65■■□□□ 1.38
PDLIM2-205ENST00000397761 PAG1Q9NWQ8 432 aa23.65■■□□□ 1.38
PDLIM2-205ENST00000397761 ALDH1B1P30837 517 aa23.64■■□□□ 1.38
PDLIM2-205ENST00000397761 SCARF1Q14162 830 aa23.64■■□□□ 1.38
PDLIM2-205ENST00000397761 STYK1Q6J9G0 422 aa23.64■■□□□ 1.38
PDLIM2-205ENST00000397761 UPF2Q9HAU5 1272 aaKnown RBP23.64■■□□□ 1.38
PDLIM2-205ENST00000397761 XDHP47989 1333 aa23.64■■□□□ 1.37
PDLIM2-205ENST00000397761 HIP1O00291 1037 aa23.63■■□□□ 1.37
PDLIM2-205ENST00000397761 MCAMP43121 646 aa23.63■■□□□ 1.37
PDLIM2-205ENST00000397761 MFAP1P55081 439 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-205ENST00000397761 KBTBD3Q8NAB2 608 aa23.63■■□□□ 1.37
PDLIM2-205ENST00000397761 EDC3Q96F86 508 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-205ENST00000397761 TBC1D32Q96NH3 1257 aa23.63■■□□□ 1.37
PDLIM2-205ENST00000397761 DNAJC2Q99543 621 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-205ENST00000397761 LEMD3Q9Y2U8 911 aa23.63■■□□□ 1.37
PDLIM2-205ENST00000397761 NDUFB9Q9Y6M9 179 aa23.63■■□□□ 1.37
PDLIM2-205ENST00000397761 WTIPA6NIX2 430 aaPredicted RBP23.62■■□□□ 1.37
PDLIM2-205ENST00000397761 SP8Q8IXZ3 490 aa23.62■■□□□ 1.37
PDLIM2-205ENST00000397761 MTFR1LQ9H019 292 aa23.62■■□□□ 1.37
PDLIM2-205ENST00000397761 PODXL2Q9NZ53 605 aa23.62■■□□□ 1.37
PDLIM2-205ENST00000397761 C15orf52Q6ZUT6 534 aaKnown RBP23.62■■□□□ 1.37
PDLIM2-205ENST00000397761 C2CD5Q86YS7 1000 aa23.62■■□□□ 1.37
PDLIM2-205ENST00000397761 FSD1Q9BTV5 496 aa23.62■■□□□ 1.37
PDLIM2-205ENST00000397761 ATP6V0A2Q9Y487 856 aa23.62■■□□□ 1.37
PDLIM2-205ENST00000397761 BRCA1P38398 1863 aaKnown RBP23.61■■□□□ 1.37
PDLIM2-205ENST00000397761 DUOX1Q9NRD9 1551 aa23.61■■□□□ 1.37
PDLIM2-205ENST00000397761 H0YIN7 160 aa23.61■■□□□ 1.37
PDLIM2-205ENST00000397761 GOLIM4O00461 696 aa23.61■■□□□ 1.37
PDLIM2-205ENST00000397761 PPEF1O14829 653 aaPredicted RBP23.61■■□□□ 1.37
PDLIM2-205ENST00000397761 FBXO33Q7Z6M2 555 aa23.61■■□□□ 1.37
PDLIM2-205ENST00000397761 SNRKQ9NRH2 765 aa23.61■■□□□ 1.37
PDLIM2-205ENST00000397761 SGSM2O43147 1006 aa23.6■■□□□ 1.37
PDLIM2-205ENST00000397761 REC8O95072 547 aa23.6■■□□□ 1.37
PDLIM2-205ENST00000397761 BCAMP50895 628 aa23.6■■□□□ 1.37
PDLIM2-205ENST00000397761 SLC51AQ86UW1 340 aa23.6■■□□□ 1.37
PDLIM2-205ENST00000397761 FAM84BQ96KN1 310 aaPredicted RBP23.6■■□□□ 1.37
PDLIM2-205ENST00000397761 DIAPH3Q9NSV4 1193 aa23.6■■□□□ 1.37
PDLIM2-205ENST00000397761 EPB41L2O43491 1005 aaKnown RBP23.59■■□□□ 1.37
PDLIM2-205ENST00000397761 ZAP70P43403 619 aa23.59■■□□□ 1.37
PDLIM2-205ENST00000397761 KCNJ4P48050 445 aa23.59■■□□□ 1.37
PDLIM2-205ENST00000397761 RBM25P49756 843 aaKnown RBP23.59■■□□□ 1.37
PDLIM2-205ENST00000397761 GPSM2P81274 684 aa23.59■■□□□ 1.37
PDLIM2-205ENST00000397761 RASGRF1Q13972 1273 aa23.59■■□□□ 1.37
PDLIM2-205ENST00000397761 HMG20BQ9P0W2 317 aa23.59■■□□□ 1.37
PDLIM2-205ENST00000397761 ANKIB1Q9P2G1 1089 aa23.59■■□□□ 1.37
PDLIM2-205ENST00000397761 RAD50Q92878 1312 aa23.58■■□□□ 1.37
PDLIM2-205ENST00000397761 FKBP4Q02790 459 aaKnown RBP eCLIP23.58■■□□□ 1.37
PDLIM2-205ENST00000397761 PI16Q6UXB8 463 aa23.58■■□□□ 1.37
PDLIM2-205ENST00000397761 SPATA5Q8NB90 893 aa23.58■■□□□ 1.37
PDLIM2-205ENST00000397761 RUFY2Q8WXA3 655 aa23.58■■□□□ 1.37
PDLIM2-205ENST00000397761 C22orf23Q9BZE7 217 aa23.58■■□□□ 1.37
PDLIM2-205ENST00000397761 IL25Q9H293 177 aa23.58■■□□□ 1.37
PDLIM2-205ENST00000397761 ANTXR1Q9H6X2 564 aa23.58■■□□□ 1.37
PDLIM2-205ENST00000397761 PDS5AQ29RF7 1337 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-205ENST00000397761 ZBTB7AO95365 584 aa23.57■■□□□ 1.36
PDLIM2-205ENST00000397761 GYG1P46976 350 aa23.57■■□□□ 1.36
PDLIM2-205ENST00000397761 CAVIN4Q5BKX8 364 aa23.57■■□□□ 1.36
PDLIM2-205ENST00000397761 USP26Q9BXU7 913 aa23.57■■□□□ 1.36
PDLIM2-205ENST00000397761 SPON1Q9HCB6 807 aa23.57■■□□□ 1.36
PDLIM2-205ENST00000397761 GNL3LQ9NVN8 582 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-205ENST00000397761 CCDC88AQ3V6T2 1871 aa23.57■■□□□ 1.36
PDLIM2-205ENST00000397761 SEMA3EO15041 775 aa23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 CYP2E1P05181 493 aaPredicted RBP23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 ATP2B4P23634 1241 aa23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 KLRK1P26718 216 aa23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 TTF1Q15361 905 aaPredicted RBP23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 CNKSR1Q969H4 720 aa23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 COL1A1P02452 1464 aaPredicted RBP23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 MED23Q9ULK4 1368 aa23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 NMIQ13287 307 aaPredicted RBP23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 CWC27Q6UX04 472 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 SGIP1Q9BQI5 828 aa23.56■■□□□ 1.36
PDLIM2-205ENST00000397761 CHD4Q14839 1912 aa23.55■■□□□ 1.36
PDLIM2-205ENST00000397761 CHRNA5P30532 468 aa23.55■■□□□ 1.36
PDLIM2-205ENST00000397761 GGA1Q9UJY5 639 aa23.55■■□□□ 1.36
PDLIM2-205ENST00000397761 NSFL1CQ9UNZ2 370 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-205ENST00000397761 A0A0D9SFI3 127 aa23.54■■□□□ 1.36
PDLIM2-205ENST00000397761 HIBADHP31937 336 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-205ENST00000397761 TXNRD3Q86VQ6 643 aa23.54■■□□□ 1.36
PDLIM2-205ENST00000397761 TBC1D16Q8TBP0 767 aa23.54■■□□□ 1.36
PDLIM2-205ENST00000397761 ZNF622Q969S3 477 aaKnown RBP eCLIP23.54■■□□□ 1.36
PDLIM2-205ENST00000397761 FAM227BQ96M60 508 aa23.54■■□□□ 1.36
PDLIM2-205ENST00000397761 SNED1Q8TER0 1413 aa23.54■■□□□ 1.36
PDLIM2-205ENST00000397761 MAST2Q6P0Q8 1798 aa23.53■■□□□ 1.36
PDLIM2-205ENST00000397761 ZFYP08048 801 aaPredicted RBP23.53■■□□□ 1.36
PDLIM2-205ENST00000397761 POLD1P28340 1107 aa23.53■■□□□ 1.36
PDLIM2-205ENST00000397761 LRRFIP1Q32MZ4 808 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-205ENST00000397761 PRPF40BQ6NWY9 871 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-205ENST00000397761 RNF113AO15541 343 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-205ENST00000397761 UFL1O94874 794 aa23.52■■□□□ 1.36
PDLIM2-205ENST00000397761 ZMYM1Q5SVZ6 1142 aa23.52■■□□□ 1.36
PDLIM2-205ENST00000397761 C7orf43Q8WVR3 580 aa23.52■■□□□ 1.36
PDLIM2-205ENST00000397761 PIH1D3Q9NQM4 214 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-205ENST00000397761 POLLQ9UGP5 575 aa23.52■■□□□ 1.36
PDLIM2-205ENST00000397761 DENND2AQ9ULE3 1009 aa23.52■■□□□ 1.36
PDLIM2-205ENST00000397761 VPS37DQ86XT2 251 aa23.51■■□□□ 1.35
PDLIM2-205ENST00000397761 LSG1Q9H089 658 aaKnown RBP23.51■■□□□ 1.35
PDLIM2-205ENST00000397761 HELLSQ9NRZ9 838 aa23.51■■□□□ 1.35
PDLIM2-205ENST00000397761 ATF5Q9Y2D1 282 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-205ENST00000397761 KCNA3P22001 575 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms