RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 CYP2C19P33261 490 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 ERCC6LQ2NKX8 1250 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 ARMCX5Q6P1M9 558 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 SYT10Q6XYQ8 523 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 TMC6Q7Z403 805 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 XPO4Q9C0E2 1151 aaKnown RBP10.84□□□□□ -0.67
UCA1-201ENST00000397381 SIL1Q9H173 461 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 DDX21Q9NR30 783 aaKnown RBP eCLIP10.84□□□□□ -0.67
UCA1-201ENST00000397381 FHOD1Q9Y613 1164 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 SH3TC1Q8TE82 1336 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 ATP8B1O43520 1251 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 SMC2O95347 1197 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 CLCN6P51797 869 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 NBPF6Q5VWK0 638 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
UCA1-201ENST00000397381 NBPF4Q96M43 638 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 SLC26A8Q96RN1 970 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 FTOQ9C0B1 505 aaKnown RBP eCLIP10.84□□□□□ -0.67
UCA1-201ENST00000397381 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
UCA1-201ENST00000397381 COPRSQ9NQ92 184 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 IFNKQ9P0W0 207 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 PCDHA7Q9UN72 937 aa10.84□□□□□ -0.67
UCA1-201ENST00000397381 PNMA6AP0CW24 399 aaPredicted RBP10.83□□□□□ -0.68
UCA1-201ENST00000397381 NLRP12P59046 1061 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 ETF1P62495 437 aaKnown RBP10.83□□□□□ -0.68
UCA1-201ENST00000397381 EXOSC10Q01780 885 aaKnown RBP10.83□□□□□ -0.68
UCA1-201ENST00000397381 KCNG4Q8TDN1 519 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 ZNF274Q96GC6 653 aaPredicted RBP10.83□□□□□ -0.68
UCA1-201ENST00000397381 HAUS7Q99871 368 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 PHRF1Q9P1Y6 1649 aaKnown RBP10.83□□□□□ -0.68
UCA1-201ENST00000397381 NFAT5O94916 1531 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 YEATS4O95619 227 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 SLC20A2Q08357 652 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 NEXNQ0ZGT2 675 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 ARHGAP29Q52LW3 1261 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 TNNI3KQ59H18 835 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 C1orf141Q5JVX7 400 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 TEX35Q5T0J7 233 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 TMCO3Q6UWJ1 677 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 STOX1Q6ZVD7 989 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 EDC3Q96F86 508 aaKnown RBP10.83□□□□□ -0.68
UCA1-201ENST00000397381 DSCC1Q9BVC3 393 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 DBNLQ9UJU6 430 aaKnown RBP10.83□□□□□ -0.68
UCA1-201ENST00000397381 FPGT-TNNI3KV9GXZ4 949 aa10.83□□□□□ -0.68
UCA1-201ENST00000397381 IKBKBO14920 756 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 ZRANB2O95218 330 aaKnown RBP eCLIP10.82□□□□□ -0.68
UCA1-201ENST00000397381 GTF2E1P29083 439 aaPredicted RBP10.82□□□□□ -0.68
UCA1-201ENST00000397381 APOBRQ0VD83 1088 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 MPRIPQ6WCQ1 1025 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 ILDR1Q86SU0 546 aaPredicted RBP10.82□□□□□ -0.68
UCA1-201ENST00000397381 UBXN4Q92575 508 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 TSPYL1Q9H0U9 437 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 ORC3Q9UBD5 711 aaPredicted RBP10.82□□□□□ -0.68
UCA1-201ENST00000397381 SIPA1L3O60292 1781 aaPredicted RBP10.82□□□□□ -0.68
UCA1-201ENST00000397381 LMTK3Q96Q04 1460 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 A0A087WWV3 80 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 TULP2O00295 520 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 NPHP1O15259 732 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 CBFA2T2O43439 604 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 IGKV5-2P06315 115 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 SLC3A2P08195 630 aaKnown RBP10.82□□□□□ -0.68
UCA1-201ENST00000397381 FOSBP53539 338 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 IRX5P78411 483 aaPredicted RBP10.82□□□□□ -0.68
UCA1-201ENST00000397381 STK38Q15208 465 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 DPCR1Q3MIW9 517 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 CCDC129Q6ZRS4 1044 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 FCHSD1Q86WN1 690 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 HOMER1Q86YM7 354 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 LINC00301Q8NCQ3 95 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 LRRC2Q9BYS8 371 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 ST7Q9NRC1 585 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 HELLSQ9NRZ9 838 aa10.82□□□□□ -0.68
UCA1-201ENST00000397381 CARMIL3Q8ND23 1372 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 PALLDQ8WX93 1383 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 ERICH4A6NGS2 130 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 NEURL1BA8MQ27 555 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 MYO1BO43795 1136 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 CDK11BP21127 795 aaKnown RBP10.81□□□□□ -0.68
UCA1-201ENST00000397381 PLA2G4AP47712 749 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 NDUFA8P51970 172 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 GCKRQ14397 625 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 SF3A1Q15459 793 aaKnown RBP10.81□□□□□ -0.68
UCA1-201ENST00000397381 FBXL16Q8N461 479 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 KBTBD3Q8NAB2 608 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 MNS1Q8NEH6 495 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.81□□□□□ -0.68
UCA1-201ENST00000397381 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.81□□□□□ -0.68
UCA1-201ENST00000397381 A0A1B0GVL5 298 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 EFCAB8A8MWE9 144 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 PDIA3P30101 505 aaKnown RBP10.81□□□□□ -0.68
UCA1-201ENST00000397381 PSME1Q06323 249 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 TFCP2Q12800 502 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 LRRFIP1Q32MZ4 808 aaKnown RBP10.81□□□□□ -0.68
UCA1-201ENST00000397381 BRAPQ7Z569 592 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 KLHDC4Q8TBB5 520 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 POLR3EQ9NVU0 708 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 DNAI1Q9UI46 699 aa10.81□□□□□ -0.68
UCA1-201ENST00000397381 RGPD2P0DJD1 1756 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms