RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CCT2P78371 535 aaKnown RBP10.68□□□□□ -0.7
CAPN3-206ENST00000397163 NAA16Q6N069 864 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-206ENST00000397163 SEC62Q99442 399 aaKnown RBP10.68□□□□□ -0.7
CAPN3-206ENST00000397163 ZCCHC17Q9NP64 241 aaKnown RBP10.68□□□□□ -0.7
CAPN3-206ENST00000397163 CHGBP05060 677 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 CYP21A2P08686 494 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 RIC3Q7Z5B4 369 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 NSUN7Q8NE18 718 aaKnown RBP10.67□□□□□ -0.7
CAPN3-206ENST00000397163 SMARCC2Q8TAQ2 1214 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 LLPHQ9BRT6 129 aaKnown RBP10.67□□□□□ -0.7
CAPN3-206ENST00000397163 SLFNL1Q499Z3 407 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 AKAP4Q5JQC9 854 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 CHD2O14647 1828 aaKnown RBP10.67□□□□□ -0.7
CAPN3-206ENST00000397163 NRDCO43847 1150 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 PFKFB2O60825 505 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 KCNA6P17658 529 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 APOBRQ0VD83 1088 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 PLEKHO1Q53GL0 409 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-206ENST00000397163 C1orf141Q5JVX7 400 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 TMC6Q7Z403 805 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 FMNL2Q96PY5 1086 aa10.67□□□□□ -0.7
CAPN3-206ENST00000397163 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-206ENST00000397163 CCDC9Q9Y3X0 531 aaKnown RBP10.67□□□□□ -0.7
CAPN3-206ENST00000397163 SEC31AO94979 1220 aaKnown RBP10.66□□□□□ -0.7
CAPN3-206ENST00000397163 SFPQP23246 707 aaKnown RBP eCLIP10.66□□□□□ -0.7
CAPN3-206ENST00000397163 BMS1Q14692 1282 aaKnown RBP10.66□□□□□ -0.7
CAPN3-206ENST00000397163 SF3A1Q15459 793 aaKnown RBP10.66□□□□□ -0.7
CAPN3-206ENST00000397163 HOMER1Q86YM7 354 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 ENGASEQ8NFI3 743 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 COL15A1P39059 1388 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 LOC102724159A0A0B4J2E5 919 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 CLCN6P51797 869 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 PWP2Q15269 919 aaKnown RBP10.66□□□□□ -0.7
CAPN3-206ENST00000397163 MCMDC2Q4G0Z9 681 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 E4F1Q66K89 784 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-206ENST00000397163 IP6K1Q92551 441 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 MRPS27Q92552 414 aaKnown RBP10.66□□□□□ -0.7
CAPN3-206ENST00000397163 PPP1R13BQ96KQ4 1090 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 OSBPL5Q9H0X9 879 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-206ENST00000397163 IFNKQ9P0W0 207 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 IMPACTQ9P2X3 320 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 DBNLQ9UJU6 430 aaKnown RBP10.66□□□□□ -0.7
CAPN3-206ENST00000397163 JCADQ9P266 1359 aa10.66□□□□□ -0.7
CAPN3-206ENST00000397163 A0A1B0GVL5 298 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 ATP5JP18859 108 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 DHX32Q7L7V1 743 aaKnown RBP10.65□□□□□ -0.7
CAPN3-206ENST00000397163 NBPF11Q86T75 865 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 CCDC150Q8NCX0 1101 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 SMARCE1Q969G3 411 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 LRRC59Q96AG4 307 aaKnown RBP10.65□□□□□ -0.7
CAPN3-206ENST00000397163 XPO4Q9C0E2 1151 aaKnown RBP10.65□□□□□ -0.7
CAPN3-206ENST00000397163 EPC1Q9H2F5 836 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 NCOA5Q9HCD5 579 aaKnown RBP10.65□□□□□ -0.7
CAPN3-206ENST00000397163 FHOD1Q9Y613 1164 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 RNMTO43148 476 aaKnown RBP10.65□□□□□ -0.7
CAPN3-206ENST00000397163 CTDNEP1O95476 244 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 PLA2G4AP47712 749 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 NEXNQ0ZGT2 675 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 ATL3Q6DD88 541 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 STOX1Q6ZVD7 989 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 DDX46Q7L014 1031 aaKnown RBP10.65□□□□□ -0.7
CAPN3-206ENST00000397163 CCDC34Q96HJ3 373 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 PIK3C2AO00443 1686 aa10.65□□□□□ -0.7
CAPN3-206ENST00000397163 HMGB1P09429 215 aaKnown RBP10.65□□□□□ -0.71
CAPN3-206ENST00000397163 TPM4P67936 248 aa10.65□□□□□ -0.71
CAPN3-206ENST00000397163 DPCR1Q3MIW9 517 aa10.65□□□□□ -0.71
CAPN3-206ENST00000397163 CCDC191Q8NCU4 936 aa10.65□□□□□ -0.71
CAPN3-206ENST00000397163 RASSF4Q9H2L5 321 aa10.65□□□□□ -0.71
CAPN3-206ENST00000397163 KCND1Q9NSA2 647 aa10.65□□□□□ -0.71
CAPN3-206ENST00000397163 FAM53CQ9NYF3 392 aa10.65□□□□□ -0.71
CAPN3-206ENST00000397163 PCDHA7Q9UN72 937 aa10.65□□□□□ -0.71
CAPN3-206ENST00000397163 UTYO14607 1347 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 BIN1O00499 593 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 PNMA6AP0CW24 399 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-206ENST00000397163 TFCP2Q12800 502 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 ARHGAP29Q52LW3 1261 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 IGKV5-2P06315 115 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 STK38Q15208 465 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 TNNI3KQ59H18 835 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 EPHA10Q5JZY3 1008 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 ARMCX5Q6P1M9 558 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 TEX2Q8IWB9 1127 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 FMR1NBQ8N0W7 255 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-206ENST00000397163 L2HGDHQ9H9P8 463 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 DDX21Q9NR30 783 aaKnown RBP eCLIP10.64□□□□□ -0.71
CAPN3-206ENST00000397163 FPGT-TNNI3KV9GXZ4 949 aa10.64□□□□□ -0.71
CAPN3-206ENST00000397163 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-206ENST00000397163 MYL6BP14649 208 aa10.63□□□□□ -0.71
CAPN3-206ENST00000397163 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.63□□□□□ -0.71
CAPN3-206ENST00000397163 ZNF609O15014 1411 aa10.63□□□□□ -0.71
CAPN3-206ENST00000397163 H2AFXP16104 143 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-206ENST00000397163 NDUFA8P51970 172 aa10.63□□□□□ -0.71
CAPN3-206ENST00000397163 MYD88Q99836 296 aa10.63□□□□□ -0.71
CAPN3-206ENST00000397163 DBNDD2Q9BQY9 259 aa10.63□□□□□ -0.71
CAPN3-206ENST00000397163 KIAA1468Q9P260 1216 aa10.63□□□□□ -0.71
CAPN3-206ENST00000397163 MYO1CO00159 1063 aa10.63□□□□□ -0.71
CAPN3-206ENST00000397163 GTF2A1P52655 376 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-206ENST00000397163 ADALQ6DHV7 355 aa10.63□□□□□ -0.71
CAPN3-206ENST00000397163 CHST3Q7LGC8 479 aa10.63□□□□□ -0.71
CAPN3-206ENST00000397163 UBXN4Q92575 508 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms