RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 SSH3Q8TE77 659 aa11.93□□□□□ -0.5
FGFR1-209ENST00000397113 ERO1AQ96HE7 468 aa11.93□□□□□ -0.5
FGFR1-209ENST00000397113 NAT10Q9H0A0 1025 aaKnown RBP11.93□□□□□ -0.5
FGFR1-209ENST00000397113 ANO10Q9NW15 660 aa11.93□□□□□ -0.5
FGFR1-209ENST00000397113 RNF216Q9NWF9 866 aaPredicted RBP11.93□□□□□ -0.5
FGFR1-209ENST00000397113 UTP14AQ9BVJ6 771 aaKnown RBP11.93□□□□□ -0.5
FGFR1-209ENST00000397113 XPO4Q9C0E2 1151 aaKnown RBP11.93□□□□□ -0.5
FGFR1-209ENST00000397113 KRBA2Q6ZNG9 492 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 EVI5LQ96CN4 794 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 NEK1Q96PY6 1258 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 USP28Q96RU2 1077 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 LGR6Q9HBX8 967 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 SBNO1A3KN83 1393 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 RBM6P78332 1123 aaKnown RBP11.92□□□□□ -0.5
FGFR1-209ENST00000397113 MCM6Q14566 821 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 ANKRD1Q15327 319 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 IL17REQ8NFR9 667 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 GJB4Q9NTQ9 266 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 RGPD3A6NKT7 1758 aaPredicted RBP11.92□□□□□ -0.5
FGFR1-209ENST00000397113 RGPD4Q7Z3J3 1758 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 CLCN6P51797 869 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 PLA2G4DQ86XP0 818 aa11.92□□□□□ -0.5
FGFR1-209ENST00000397113 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
FGFR1-209ENST00000397113 ABTB2Q8N961 1025 aa11.91□□□□□ -0.5
FGFR1-209ENST00000397113 CPLX3Q8WVH0 158 aa11.91□□□□□ -0.5
FGFR1-209ENST00000397113 EAF2Q96CJ1 260 aaPredicted RBP11.91□□□□□ -0.5
FGFR1-209ENST00000397113 CASZ1Q86V15 1759 aa11.91□□□□□ -0.5
FGFR1-209ENST00000397113 CPLX1O14810 134 aa11.91□□□□□ -0.5
FGFR1-209ENST00000397113 TDRD7Q8NHU6 1098 aaKnown RBP11.91□□□□□ -0.5
FGFR1-209ENST00000397113 SALL3Q9BXA9 1300 aa11.91□□□□□ -0.5
FGFR1-209ENST00000397113 RPS6KB1P23443 525 aa11.91□□□□□ -0.5
FGFR1-209ENST00000397113 GNG11P61952 73 aa11.91□□□□□ -0.5
FGFR1-209ENST00000397113 HSP90AB3PQ58FF7 597 aa11.91□□□□□ -0.5
FGFR1-209ENST00000397113 SYNE3Q6ZMZ3 975 aa11.91□□□□□ -0.5
FGFR1-209ENST00000397113 TOMM22Q9NS69 142 aa11.91□□□□□ -0.5
FGFR1-209ENST00000397113 BTBD11A6QL63 1104 aa11.9□□□□□ -0.5
FGFR1-209ENST00000397113 KARSQ15046 597 aaKnown RBP11.9□□□□□ -0.5
FGFR1-209ENST00000397113 DPCR1Q3MIW9 517 aa11.9□□□□□ -0.5
FGFR1-209ENST00000397113 CCDC85AQ96PX6 553 aaPredicted RBP11.9□□□□□ -0.5
FGFR1-209ENST00000397113 MORC2Q9Y6X9 1032 aaPredicted RBP11.9□□□□□ -0.5
FGFR1-209ENST00000397113 PRAMEF22A3QJZ6 481 aa11.9□□□□□ -0.5
FGFR1-209ENST00000397113 GOLPH3LQ9H4A5 285 aa11.9□□□□□ -0.5
FGFR1-209ENST00000397113 ARHGEF10O15013 1369 aa11.9□□□□□ -0.5
FGFR1-209ENST00000397113 LAMB2P55268 1798 aa11.9□□□□□ -0.5
FGFR1-209ENST00000397113 GPS2Q13227 327 aa11.89□□□□□ -0.51
FGFR1-209ENST00000397113 CCDC191Q8NCU4 936 aa11.89□□□□□ -0.51
FGFR1-209ENST00000397113 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.89□□□□□ -0.51
FGFR1-209ENST00000397113 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
FGFR1-209ENST00000397113 PTPDC1A2A3K4 754 aa11.89□□□□□ -0.51
FGFR1-209ENST00000397113 ST5P78524 1137 aa11.89□□□□□ -0.51
FGFR1-209ENST00000397113 NECTIN1Q15223 517 aa11.89□□□□□ -0.51
FGFR1-209ENST00000397113 ATP1A3P13637 1013 aa11.89□□□□□ -0.51
FGFR1-209ENST00000397113 RXRAP19793 462 aa11.89□□□□□ -0.51
FGFR1-209ENST00000397113 EVCP57679 992 aa11.89□□□□□ -0.51
FGFR1-209ENST00000397113 PROSER3Q2NL68 480 aa11.89□□□□□ -0.51
FGFR1-209ENST00000397113 BICC1Q9H694 974 aaKnown RBP11.89□□□□□ -0.51
FGFR1-209ENST00000397113 PUF60Q9UHX1 559 aaKnown RBP11.89□□□□□ -0.51
FGFR1-209ENST00000397113 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
FGFR1-209ENST00000397113 SLC3A2P08195 630 aaKnown RBP11.88□□□□□ -0.51
FGFR1-209ENST00000397113 CCDC82Q8N4S0 544 aa11.88□□□□□ -0.51
FGFR1-209ENST00000397113 TOB2Q14106 344 aaPredicted RBP11.88□□□□□ -0.51
FGFR1-209ENST00000397113 WASHC4Q2M389 1173 aa11.88□□□□□ -0.51
FGFR1-209ENST00000397113 SPECC1Q5M775 1068 aa11.88□□□□□ -0.51
FGFR1-209ENST00000397113 ZNF530Q6P9A1 599 aaPredicted RBP11.88□□□□□ -0.51
FGFR1-209ENST00000397113 PPP1R13BQ96KQ4 1090 aa11.88□□□□□ -0.51
FGFR1-209ENST00000397113 SNRKQ9NRH2 765 aa11.88□□□□□ -0.51
FGFR1-209ENST00000397113 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
FGFR1-209ENST00000397113 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
FGFR1-209ENST00000397113 KCNA4P22459 653 aa11.88□□□□□ -0.51
FGFR1-209ENST00000397113 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.88□□□□□ -0.51
FGFR1-209ENST00000397113 ZNF396Q96N95 335 aaPredicted RBP11.88□□□□□ -0.51
FGFR1-209ENST00000397113 COL5A3P25940 1745 aaPredicted RBP11.88□□□□□ -0.51
FGFR1-209ENST00000397113 PES1O00541 588 aaKnown RBP11.87□□□□□ -0.51
FGFR1-209ENST00000397113 PNMA6AP0CW24 399 aaPredicted RBP11.87□□□□□ -0.51
FGFR1-209ENST00000397113 OAS2P29728 719 aaKnown RBP11.87□□□□□ -0.51
FGFR1-209ENST00000397113 RABEP2Q9H5N1 569 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
FGFR1-209ENST00000397113 ZNF446Q9NWS9 450 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 RSPH14Q9UHP6 348 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.87□□□□□ -0.512e-6■■■□□ 15.2
FGFR1-209ENST00000397113 ROBO1Q9Y6N7 1651 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 GOLIM4O00461 696 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 UBASH3AP57075 661 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 SCRN1Q12765 414 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 CCDC102AQ96A19 550 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 DESI2Q9BSY9 194 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 PLEKHA4Q9H4M7 779 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 THSD7AQ9UPZ6 1657 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 TRIM66O15016 1216 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 NEMFO60524 1076 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 NDUFA8P51970 172 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 CCZ1BP86790 482 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 CCZ1P86791 482 aaPredicted RBP11.87□□□□□ -0.51
FGFR1-209ENST00000397113 FKBP4Q02790 459 aaKnown RBP eCLIP11.87□□□□□ -0.51
FGFR1-209ENST00000397113 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
FGFR1-209ENST00000397113 LZTFL1Q9NQ48 299 aa11.87□□□□□ -0.51
FGFR1-209ENST00000397113 SLC39A6Q13433 755 aa11.86□□□□□ -0.51
FGFR1-209ENST00000397113 TOP1P11387 765 aaKnown RBP11.86□□□□□ -0.51
FGFR1-209ENST00000397113 IQCB1Q15051 598 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms