RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CWC25Q9NXE8 425 aaPredicted RBP19.39■□□□□ 0.69
SEC13-206ENST00000397102 MYO3BQ8WXR4 1341 aa19.39■□□□□ 0.69
SEC13-206ENST00000397102 DACT2Q5SW24 774 aa19.38■□□□□ 0.69
SEC13-206ENST00000397102 ARMC9Q7Z3E5 817 aa19.38■□□□□ 0.69
SEC13-206ENST00000397102 CDC5LQ99459 802 aaKnown RBP19.38■□□□□ 0.69
SEC13-206ENST00000397102 LAMB1P07942 1786 aa19.37■□□□□ 0.69
SEC13-206ENST00000397102 MMP14P50281 582 aa19.37■□□□□ 0.69
SEC13-206ENST00000397102 PTPN12Q05209 780 aaKnown RBP19.37■□□□□ 0.69
SEC13-206ENST00000397102 MBIPQ9NS73 344 aa19.37■□□□□ 0.69
SEC13-206ENST00000397102 ALDH1A1P00352 501 aa19.36■□□□□ 0.69
SEC13-206ENST00000397102 STRIP1Q5VSL9 837 aa19.36■□□□□ 0.69
SEC13-206ENST00000397102 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
SEC13-206ENST00000397102 MXD3Q9BW11 206 aa19.36■□□□□ 0.69
SEC13-206ENST00000397102 R3HDMLQ9H3Y0 253 aa19.36■□□□□ 0.69
SEC13-206ENST00000397102 RBBP6Q7Z6E9 1792 aaKnown RBP19.35■□□□□ 0.69
SEC13-206ENST00000397102 WTIPA6NIX2 430 aaPredicted RBP19.35■□□□□ 0.69
SEC13-206ENST00000397102 SASH1O94885 1247 aa19.35■□□□□ 0.69
SEC13-206ENST00000397102 CTSWP56202 376 aa19.35■□□□□ 0.69
SEC13-206ENST00000397102 APOBEC3FQ8IUX4 373 aaKnown RBP19.35■□□□□ 0.69
SEC13-206ENST00000397102 FBXW7Q969H0 707 aa19.35■□□□□ 0.69
SEC13-206ENST00000397102 METTL22Q9BUU2 404 aaPredicted RBP19.35■□□□□ 0.69
SEC13-206ENST00000397102 COA1Q9GZY4 146 aa19.35■□□□□ 0.69
SEC13-206ENST00000397102 BSDC1Q9NW68 430 aaPredicted RBP19.35■□□□□ 0.69
SEC13-206ENST00000397102 MINPP1Q9UNW1 487 aa19.35■□□□□ 0.69
SEC13-206ENST00000397102 CCT4P50991 539 aaKnown RBP19.34■□□□□ 0.69
SEC13-206ENST00000397102 LDLRAD1Q5T700 205 aa19.34■□□□□ 0.69
SEC13-206ENST00000397102 SPRYD7Q5W111 196 aa19.34■□□□□ 0.69
SEC13-206ENST00000397102 COL1A1P02452 1464 aaPredicted RBP19.34■□□□□ 0.69
SEC13-206ENST00000397102 DDX58O95786 925 aaKnown RBP19.33■□□□□ 0.68
SEC13-206ENST00000397102 ZNF853P0CG23 659 aa19.33■□□□□ 0.68
SEC13-206ENST00000397102 PRKG1Q13976 671 aa19.33■□□□□ 0.68
SEC13-206ENST00000397102 WDR43Q15061 677 aaKnown RBP eCLIP19.33■□□□□ 0.68
SEC13-206ENST00000397102 ECM29Q5VYK3 1845 aa19.32■□□□□ 0.68
SEC13-206ENST00000397102 MYBBP1AQ9BQG0 1328 aaKnown RBP19.32■□□□□ 0.68
SEC13-206ENST00000397102 MANSC4A6NHS7 340 aaPredicted RBP19.32■□□□□ 0.68
SEC13-206ENST00000397102 INHBEP58166 350 aa19.32■□□□□ 0.68
SEC13-206ENST00000397102 INTS3Q68E01 1043 aaKnown RBP19.32■□□□□ 0.68
SEC13-206ENST00000397102 TTLL11Q8NHH1 800 aa19.32■□□□□ 0.68
SEC13-206ENST00000397102 ANGEL1Q9UNK9 670 aaKnown RBP19.32■□□□□ 0.68
SEC13-206ENST00000397102 TRIM17Q9Y577 477 aa19.32■□□□□ 0.68
SEC13-206ENST00000397102 HABP4Q5JVS0 413 aaKnown RBP19.31■□□□□ 0.68
SEC13-206ENST00000397102 ZBED3Q96IU2 234 aaPredicted RBP19.31■□□□□ 0.68
SEC13-206ENST00000397102 GREM2Q9H772 168 aa19.31■□□□□ 0.68
SEC13-206ENST00000397102 LEMD3Q9Y2U8 911 aa19.31■□□□□ 0.68
SEC13-206ENST00000397102 ELL2O00472 640 aaPredicted RBP19.3■□□□□ 0.68
SEC13-206ENST00000397102 TTLL5Q6EMB2 1281 aa19.3■□□□□ 0.68
SEC13-206ENST00000397102 OTOP1Q7RTM1 612 aa19.3■□□□□ 0.68
SEC13-206ENST00000397102 TXNRD3Q86VQ6 643 aa19.3■□□□□ 0.68
SEC13-206ENST00000397102 IFNL1Q8IU54 200 aa19.3■□□□□ 0.68
SEC13-206ENST00000397102 KIAA0825Q8IV33 1275 aa19.3■□□□□ 0.68
SEC13-206ENST00000397102 IFT57Q9NWB7 429 aa19.3■□□□□ 0.68
SEC13-206ENST00000397102 ZBTB48P10074 688 aaPredicted RBP19.29■□□□□ 0.68
SEC13-206ENST00000397102 MAP3K11Q16584 847 aa19.29■□□□□ 0.68
SEC13-206ENST00000397102 ADAMTS8Q9UP79 889 aa19.29■□□□□ 0.68
SEC13-206ENST00000397102 MAP3K2Q9Y2U5 619 aa19.29■□□□□ 0.68
SEC13-206ENST00000397102 POTEFA5A3E0 1075 aa19.28■□□□□ 0.68
SEC13-206ENST00000397102 GNAI1P63096 354 aa19.28■□□□□ 0.68
SEC13-206ENST00000397102 SLC10A4Q96EP9 437 aa19.28■□□□□ 0.68
SEC13-206ENST00000397102 CHMP4AQ9BY43 222 aa19.28■□□□□ 0.68
SEC13-206ENST00000397102 IGKV5-2P06315 115 aa19.27■□□□□ 0.68
SEC13-206ENST00000397102 IGHMBP2P38935 993 aaKnown RBP19.27■□□□□ 0.68
SEC13-206ENST00000397102 CCDC30Q5VVM6 783 aa19.27■□□□□ 0.68
SEC13-206ENST00000397102 ERO1AQ96HE7 468 aa19.27■□□□□ 0.68
SEC13-206ENST00000397102 WNK4Q96J92 1243 aa19.27■□□□□ 0.68
SEC13-206ENST00000397102 DEFB129Q9H1M3 183 aa19.27■□□□□ 0.68
SEC13-206ENST00000397102 FZD1Q9UP38 647 aa19.27■□□□□ 0.68
SEC13-206ENST00000397102 SSC5DA1L4H1 1573 aa19.27■□□□□ 0.67
SEC13-206ENST00000397102 ZNF804BA4D1E1 1349 aa19.26■□□□□ 0.67
SEC13-206ENST00000397102 UNCXA6NJT0 531 aa19.26■□□□□ 0.67
SEC13-206ENST00000397102 IGF2BP3O00425 579 aaKnown RBP eCLIP19.26■□□□□ 0.67
SEC13-206ENST00000397102 GTF2IP78347 998 aa19.26■□□□□ 0.67
SEC13-206ENST00000397102 CALD1Q05682 793 aaKnown RBP19.26■□□□□ 0.67
SEC13-206ENST00000397102 KSR2Q6VAB6 950 aa19.26■□□□□ 0.67
SEC13-206ENST00000397102 C8orf58Q8NAV2 365 aa19.26■□□□□ 0.67
SEC13-206ENST00000397102 ANKRD2Q9GZV1 360 aa19.26■□□□□ 0.67
SEC13-206ENST00000397102 PTPN22Q9Y2R2 807 aa19.26■□□□□ 0.67
SEC13-206ENST00000397102 PPP2R3BQ9Y5P8 575 aa19.26■□□□□ 0.67
SEC13-206ENST00000397102 PPP1R12BO60237 982 aaPredicted RBP19.25■□□□□ 0.67
SEC13-206ENST00000397102 KLRK1P26718 216 aa19.25■□□□□ 0.67
SEC13-206ENST00000397102 NEXNQ0ZGT2 675 aa19.25■□□□□ 0.67
SEC13-206ENST00000397102 DLGAP5Q15398 846 aa19.25■□□□□ 0.67
SEC13-206ENST00000397102 CLMNQ96JQ2 1002 aa19.25■□□□□ 0.67
SEC13-206ENST00000397102 PI4KAP2A4QPH2 592 aa19.24■□□□□ 0.67
SEC13-206ENST00000397102 PI4KAP1Q8N8J0 262 aa19.24■□□□□ 0.67
SEC13-206ENST00000397102 MTMR14Q8NCE2 650 aa19.24■□□□□ 0.67
SEC13-206ENST00000397102 KIAA0100Q14667 2235 aaKnown RBP19.24■□□□□ 0.67
SEC13-206ENST00000397102 CWF19L2Q2TBE0 894 aaKnown RBP19.23■□□□□ 0.67
SEC13-206ENST00000397102 OTUD7BQ6GQQ9 843 aa19.23■□□□□ 0.67
SEC13-206ENST00000397102 ARMC5Q96C12 935 aa19.23■□□□□ 0.67
SEC13-206ENST00000397102 CD209Q9NNX6 404 aa19.23■□□□□ 0.67
SEC13-206ENST00000397102 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.23■□□□□ 0.67
SEC13-206ENST00000397102 A0A1B0GUL6 1792 aa19.22■□□□□ 0.67
SEC13-206ENST00000397102 NEURL1BA8MQ27 555 aa19.22■□□□□ 0.67
SEC13-206ENST00000397102 H7C1W4 665 aa19.22■□□□□ 0.67
SEC13-206ENST00000397102 ITGA6P23229 1130 aa19.22■□□□□ 0.67
SEC13-206ENST00000397102 CRHR2Q13324 411 aa19.22■□□□□ 0.67
SEC13-206ENST00000397102 UBE3BQ7Z3V4 1068 aa19.22■□□□□ 0.67
SEC13-206ENST00000397102 CD99L2Q8TCZ2 262 aa19.22■□□□□ 0.67
SEC13-206ENST00000397102 MPHOSPH8Q99549 860 aa19.22■□□□□ 0.67
SEC13-206ENST00000397102 HTTP42858 3142 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 513.4 ms