RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 NYAP1Q6ZVC0 841 aa15.64■□□□□ 0.09
TRIM40-207ENST00000396581 CGNQ9P2M7 1197 aaKnown RBP15.64■□□□□ 0.09
TRIM40-207ENST00000396581 PFKFB2O60825 505 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 STX1AQ16623 288 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 CCDC112Q8NEF3 446 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 ZHX1Q9UKY1 873 aaPredicted RBP15.63■□□□□ 0.09
TRIM40-207ENST00000396581 C5P01031 1676 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 ZNF609O15014 1411 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 TNS2Q63HR2 1409 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 NEURL1BA8MQ27 555 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 SCRN1Q12765 414 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 SNW1Q13573 536 aaKnown RBP15.63■□□□□ 0.09
TRIM40-207ENST00000396581 Q6ZUG5 572 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 C11orf57Q6ZUT1 292 aaPredicted RBP15.63■□□□□ 0.09
TRIM40-207ENST00000396581 AGXT2Q9BYV1 514 aa15.63■□□□□ 0.09
TRIM40-207ENST00000396581 GLI3P10071 1580 aa15.62■□□□□ 0.09
TRIM40-207ENST00000396581 SPATA31A5Q5VU36 1347 aa15.62■□□□□ 0.09
TRIM40-207ENST00000396581 SPATA31A7Q8IWB4 1347 aa15.62■□□□□ 0.09
TRIM40-207ENST00000396581 CYP21A2P08686 494 aa15.62■□□□□ 0.09
TRIM40-207ENST00000396581 RFX5P48382 616 aaPredicted RBP15.62■□□□□ 0.09
TRIM40-207ENST00000396581 AEBP2Q6ZN18 517 aaPredicted RBP15.62■□□□□ 0.09
TRIM40-207ENST00000396581 ENGASEQ8NFI3 743 aa15.62■□□□□ 0.09
TRIM40-207ENST00000396581 DBNLQ9UJU6 430 aaKnown RBP15.62■□□□□ 0.09
TRIM40-207ENST00000396581 DDX41Q9UJV9 622 aaKnown RBP15.62■□□□□ 0.09
TRIM40-207ENST00000396581 NRAPQ86VF7 1730 aa15.62■□□□□ 0.09
TRIM40-207ENST00000396581 GOLGA6L19H0YKK7 550 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 H3BQV1 296 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 GCKRQ14397 625 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 TPD52L1Q16890 204 aaPredicted RBP15.61■□□□□ 0.09
TRIM40-207ENST00000396581 IFFO2Q5TF58 517 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 CEP135Q66GS9 1140 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 TICAM2Q86XR7 235 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 NSUN7Q8NE18 718 aaKnown RBP15.61■□□□□ 0.09
TRIM40-207ENST00000396581 CERKQ8TCT0 537 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 PIGBQ92521 554 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 KCPQ6ZWJ8 1503 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 UBR2Q8IWV8 1755 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 SALL1Q9NSC2 1324 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 HMGB1P09429 215 aaKnown RBP15.61■□□□□ 0.09
TRIM40-207ENST00000396581 TNNI3KQ59H18 835 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 EPHA10Q5JZY3 1008 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 DHX40Q8IX18 779 aaKnown RBP15.61■□□□□ 0.09
TRIM40-207ENST00000396581 EDC3Q96F86 508 aaKnown RBP15.61■□□□□ 0.09
TRIM40-207ENST00000396581 SIL1Q9H173 461 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 MORC2Q9Y6X9 1032 aaPredicted RBP15.61■□□□□ 0.09
TRIM40-207ENST00000396581 FPGT-TNNI3KV9GXZ4 949 aa15.61■□□□□ 0.09
TRIM40-207ENST00000396581 PAPPAQ13219 1627 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 MYL6BP14649 208 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 CCZ1BP86790 482 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 CCZ1P86791 482 aaPredicted RBP15.6■□□□□ 0.09
TRIM40-207ENST00000396581 RABL6Q3YEC7 729 aaPredicted RBP15.6■□□□□ 0.09
TRIM40-207ENST00000396581 MCMDC2Q4G0Z9 681 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 BARGINQ6ZT62 677 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 COPS6Q7L5N1 327 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 KLHDC4Q8TBB5 520 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 DDX11Q96FC9 970 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 GOLPH3LQ9H4A5 285 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 NWD2Q9ULI1 1742 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 TOGARAM1Q9Y4F4 1720 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 SH3TC1Q8TE82 1336 aa15.6■□□□□ 0.09
TRIM40-207ENST00000396581 CTDNEP1O95476 244 aa15.59■□□□□ 0.09
TRIM40-207ENST00000396581 PTPN12Q05209 780 aaKnown RBP15.59■□□□□ 0.09
TRIM40-207ENST00000396581 GABPB1Q06547 395 aaPredicted RBP15.59■□□□□ 0.09
TRIM40-207ENST00000396581 AIMP1Q12904 312 aaKnown RBP15.59■□□□□ 0.09
TRIM40-207ENST00000396581 CCAR1Q8IX12 1150 aaKnown RBP15.59■□□□□ 0.09
TRIM40-207ENST00000396581 XAGE3Q8WTP9 111 aa15.59■□□□□ 0.09
TRIM40-207ENST00000396581 HAUS7Q99871 368 aa15.59■□□□□ 0.09
TRIM40-207ENST00000396581 METTL22Q9BUU2 404 aaPredicted RBP15.59■□□□□ 0.09
TRIM40-207ENST00000396581 PTCD1O75127 700 aaKnown RBP15.59■□□□□ 0.09
TRIM40-207ENST00000396581 ANO10Q9NW15 660 aa15.59■□□□□ 0.09
TRIM40-207ENST00000396581 LRP6O75581 1613 aa15.59■□□□□ 0.09
TRIM40-207ENST00000396581 PALLDQ8WX93 1383 aa15.58■□□□□ 0.09
TRIM40-207ENST00000396581 EXOSC10Q01780 885 aaKnown RBP15.58■□□□□ 0.09
TRIM40-207ENST00000396581 FAM160A1Q05DH4 1040 aa15.58■□□□□ 0.09
TRIM40-207ENST00000396581 NEXNQ0ZGT2 675 aa15.58■□□□□ 0.09
TRIM40-207ENST00000396581 ANKRD13DQ6ZTN6 518 aa15.58■□□□□ 0.09
TRIM40-207ENST00000396581 STOX1Q6ZVD7 989 aa15.58■□□□□ 0.09
TRIM40-207ENST00000396581 DHX32Q7L7V1 743 aaKnown RBP15.58■□□□□ 0.09
TRIM40-207ENST00000396581 RIC3Q7Z5B4 369 aa15.58■□□□□ 0.09
TRIM40-207ENST00000396581 FAM53CQ9NYF3 392 aa15.58■□□□□ 0.09
TRIM40-207ENST00000396581 BCL9O00512 1426 aa15.58■□□□□ 0.08
TRIM40-207ENST00000396581 NBPF26B4DH59 902 aa15.58■□□□□ 0.08
TRIM40-207ENST00000396581 SKILP12757 684 aa15.58■□□□□ 0.08
TRIM40-207ENST00000396581 DDB1Q16531 1140 aa15.58■□□□□ 0.08
TRIM40-207ENST00000396581 NBPF14Q5TI25 921 aa15.58■□□□□ 0.08
TRIM40-207ENST00000396581 NBPF10Q6P3W6 841 aaKnown RBP15.58■□□□□ 0.08
TRIM40-207ENST00000396581 NBPF15Q8N660 670 aa15.58■□□□□ 0.08
TRIM40-207ENST00000396581 OSBPL5Q9H0X9 879 aaPredicted RBP15.58■□□□□ 0.08
TRIM40-207ENST00000396581 ASAP1Q9ULH1 1129 aa15.58■□□□□ 0.08
TRIM40-207ENST00000396581 LAMA4Q16363 1823 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 USP27XA6NNY8 438 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 HSP90B1P14625 803 aaKnown RBP15.57■□□□□ 0.08
TRIM40-207ENST00000396581 NAA30Q147X3 362 aaPredicted RBP15.57■□□□□ 0.08
TRIM40-207ENST00000396581 ARID5BQ14865 1188 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 PTPN14Q15678 1187 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 SLFNL1Q499Z3 407 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 KIF18AQ8NI77 898 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 ZNF396Q96N95 335 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms