RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 MEIS3Q99687 375 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 STK31Q9BXU1 1019 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 API5Q9BZZ5 524 aaKnown RBP9.76□□□□□ -0.85
NDE1-202ENST00000396355 DCTPP1Q9H773 170 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 VEZTQ9HBM0 779 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 TUBGCP6Q96RT7 1819 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 USP31Q70CQ4 1352 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 REC8O95072 547 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 SMARCA5O60264 1052 aaPredicted RBP9.76□□□□□ -0.85
NDE1-202ENST00000396355 GADD45BO75293 160 aaPredicted RBP9.76□□□□□ -0.85
NDE1-202ENST00000396355 AMPHP49418 695 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 CEP85Q6P2H3 762 aa9.76□□□□□ -0.85
NDE1-202ENST00000396355 EIF3CLB5ME19 914 aaKnown RBP9.75□□□□□ -0.85
NDE1-202ENST00000396355 EBAG9O00559 213 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 ARMC3Q5W041 872 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 FMNL3Q8IVF7 1028 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 MICAL1Q8TDZ2 1067 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 EIF3CQ99613 913 aaKnown RBP9.75□□□□□ -0.85
NDE1-202ENST00000396355 CARD10Q9BWT7 1032 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 GOPCQ9HD26 462 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 KIF24Q5T7B8 1368 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 ATP2B1P20020 1258 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 PSEN1P49768 467 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 ENOX2Q16206 610 aaKnown RBP9.75□□□□□ -0.85
NDE1-202ENST00000396355 NUP62CLQ9H1M0 184 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 FAM160A1Q05DH4 1040 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 SPATS2LQ9NUQ6 558 aaKnown RBP9.75□□□□□ -0.85
NDE1-202ENST00000396355 NRBP1Q9UHY1 535 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 PLEKHG3A1L390 1219 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 ERLIN1O75477 346 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 AKAP17AQ02040 695 aaKnown RBP9.75□□□□□ -0.85
NDE1-202ENST00000396355 UVSSAQ2YD98 709 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 CCDC181Q5TID7 509 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 G2E3Q7L622 706 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 ANKRD44Q8N8A2 993 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 SDF4Q9BRK5 362 aa9.75□□□□□ -0.85
NDE1-202ENST00000396355 NAT10Q9H0A0 1025 aaKnown RBP9.75□□□□□ -0.85
NDE1-202ENST00000396355 MORC2Q9Y6X9 1032 aaPredicted RBP9.75□□□□□ -0.85
NDE1-202ENST00000396355 FAM208AQ9UK61 1670 aaKnown RBP9.74□□□□□ -0.85
NDE1-202ENST00000396355 LRRC37A3O60309 1634 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 CYP2C19P33261 490 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 SF3A1Q15459 793 aaKnown RBP9.74□□□□□ -0.85
NDE1-202ENST00000396355 MAP3K11Q16584 847 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 TTC22Q5TAA0 569 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 KIRREL3Q8IZU9 778 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 CNPY2Q9Y2B0 182 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 EZRP15311 586 aaKnown RBP9.74□□□□□ -0.85
NDE1-202ENST00000396355 E2F5Q15329 346 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 RPUSD2Q8IZ73 545 aaKnown RBP9.74□□□□□ -0.85
NDE1-202ENST00000396355 OTUD6BQ8N6M0 293 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 KCNH5Q8NCM2 988 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 GOLGA5Q8TBA6 731 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 KIAA1524Q8TCG1 905 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 CCP110O43303 1012 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 ZNF165P49910 485 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 MTHFSDQ2M296 383 aaKnown RBP9.74□□□□□ -0.85
NDE1-202ENST00000396355 CARD6Q9BX69 1037 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 DONSONQ9NYP3 566 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 CAPN7Q9Y6W3 813 aa9.74□□□□□ -0.85
NDE1-202ENST00000396355 F6X3S4 739 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 EIF2S2P20042 333 aaKnown RBP9.73□□□□□ -0.85
NDE1-202ENST00000396355 INPP5BP32019 993 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 EVCP57679 992 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 SF3A3Q12874 501 aaKnown RBP eCLIP9.73□□□□□ -0.85
NDE1-202ENST00000396355 MMS22LQ6ZRQ5 1243 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 PDLIM2Q96JY6 352 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 CAMKK2Q96RR4 588 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 SUDS3Q9H7L9 328 aaPredicted RBP9.73□□□□□ -0.85
NDE1-202ENST00000396355 KDRP35968 1356 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 PES1O00541 588 aaKnown RBP9.73□□□□□ -0.85
NDE1-202ENST00000396355 ONECUT3O60422 494 aaPredicted RBP9.73□□□□□ -0.85
NDE1-202ENST00000396355 SFPQP23246 707 aaKnown RBP eCLIP9.73□□□□□ -0.85
NDE1-202ENST00000396355 SLC20A2Q08357 652 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 RBBP5Q15291 538 aaKnown RBP9.73□□□□□ -0.85
NDE1-202ENST00000396355 XRN1Q8IZH2 1706 aaKnown RBP9.73□□□□□ -0.85
NDE1-202ENST00000396355 ENO4A6NNW6 628 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 MAGEA9P43362 315 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 ANAPC15P60006 121 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 SRLQ86TD4 932 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 ODF2LQ9ULJ1 636 aa9.73□□□□□ -0.85
NDE1-202ENST00000396355 H3BQV1 296 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 KIF1CO43896 1103 aaKnown RBP9.72□□□□□ -0.85
NDE1-202ENST00000396355 TXNRD1Q16881 649 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 IFFO2Q5TF58 517 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
NDE1-202ENST00000396355 MYO6Q9UM54 1294 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 WDR33Q9C0J8 1336 aaKnown RBP9.72□□□□□ -0.85
NDE1-202ENST00000396355 SLC4A2P04920 1241 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 SDSP20132 328 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 ACTN2P35609 894 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 GNG11P61952 73 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 ARL10Q8N8L6 244 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 ERCC4Q92889 916 aaPredicted RBP9.72□□□□□ -0.85
NDE1-202ENST00000396355 CRACR2AQ9BSW2 395 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 EPC1Q9H2F5 836 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 EIF4E1BA6NMX2 242 aaKnown RBP9.72□□□□□ -0.85
NDE1-202ENST00000396355 ZEB2O60315 1214 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 PNMA6AP0CW24 399 aaPredicted RBP9.72□□□□□ -0.85
NDE1-202ENST00000396355 CLCN6P51797 869 aa9.72□□□□□ -0.85
NDE1-202ENST00000396355 CTCFLQ8NI51 663 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms