RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 USP28Q96RU2 1077 aa18.45■□□□□ 0.54
HOXA3-202ENST00000396352 UBR2Q8IWV8 1755 aa18.45■□□□□ 0.54
HOXA3-202ENST00000396352 E7EWF7 191 aa18.45■□□□□ 0.54
HOXA3-202ENST00000396352 SMAP1Q8IYB5 467 aaPredicted RBP18.45■□□□□ 0.54
HOXA3-202ENST00000396352 CACTINQ8WUQ7 758 aaKnown RBP18.45■□□□□ 0.54
HOXA3-202ENST00000396352 ANKRD7Q92527 254 aa18.45■□□□□ 0.54
HOXA3-202ENST00000396352 GPR108Q9NPR9 543 aa18.45■□□□□ 0.54
HOXA3-202ENST00000396352 NBPF26B4DH59 902 aa18.45■□□□□ 0.54
HOXA3-202ENST00000396352 HSPD1P10809 573 aaKnown RBP18.45■□□□□ 0.54
HOXA3-202ENST00000396352 TIMM10P62072 90 aa18.45■□□□□ 0.54
HOXA3-202ENST00000396352 NBPF14Q5TI25 921 aa18.45■□□□□ 0.54
HOXA3-202ENST00000396352 NBPF10Q6P3W6 841 aaKnown RBP18.45■□□□□ 0.54
HOXA3-202ENST00000396352 NBPF15Q8N660 670 aa18.45■□□□□ 0.54
HOXA3-202ENST00000396352 NEUROD6Q96NK8 337 aa18.45■□□□□ 0.54
HOXA3-202ENST00000396352 NCOA5Q9HCD5 579 aaKnown RBP18.45■□□□□ 0.54
HOXA3-202ENST00000396352 MAST3O60307 1309 aa18.44■□□□□ 0.54
HOXA3-202ENST00000396352 CCT2P78371 535 aaKnown RBP18.44■□□□□ 0.54
HOXA3-202ENST00000396352 TICAM2Q86XR7 235 aa18.44■□□□□ 0.54
HOXA3-202ENST00000396352 ENGASEQ8NFI3 743 aa18.44■□□□□ 0.54
HOXA3-202ENST00000396352 CTAGE5O15320 804 aa18.44■□□□□ 0.54
HOXA3-202ENST00000396352 STX1AQ16623 288 aa18.43■□□□□ 0.54
HOXA3-202ENST00000396352 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
HOXA3-202ENST00000396352 PDIA3P30101 505 aaKnown RBP18.43■□□□□ 0.54
HOXA3-202ENST00000396352 C16orf45Q96MC5 204 aaPredicted RBP18.43■□□□□ 0.54
HOXA3-202ENST00000396352 CABP4P57796 275 aa18.43■□□□□ 0.54
HOXA3-202ENST00000396352 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
HOXA3-202ENST00000396352 ATL3Q6DD88 541 aa18.42■□□□□ 0.54
HOXA3-202ENST00000396352 CSB-PGBD3P0DP91 1061 aa18.42■□□□□ 0.54
HOXA3-202ENST00000396352 DDX17Q92841 729 aaKnown RBP18.42■□□□□ 0.54
HOXA3-202ENST00000396352 ZNF274Q96GC6 653 aaPredicted RBP18.42■□□□□ 0.54
HOXA3-202ENST00000396352 MRFAP1L1Q96HT8 127 aa18.42■□□□□ 0.54
HOXA3-202ENST00000396352 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
HOXA3-202ENST00000396352 IL15P40933 162 aaPredicted RBP18.41■□□□□ 0.54
HOXA3-202ENST00000396352 LRRC24Q50LG9 513 aa18.41■□□□□ 0.54
HOXA3-202ENST00000396352 PPP4R3BQ5MIZ7 849 aa18.41■□□□□ 0.54
HOXA3-202ENST00000396352 PPFIA3O75145 1194 aa18.41■□□□□ 0.54
HOXA3-202ENST00000396352 FAM160A1Q05DH4 1040 aa18.41■□□□□ 0.54
HOXA3-202ENST00000396352 TTLL7Q6ZT98 887 aa18.41■□□□□ 0.54
HOXA3-202ENST00000396352 CHST3Q7LGC8 479 aa18.41■□□□□ 0.54
HOXA3-202ENST00000396352 DHX40Q8IX18 779 aaKnown RBP18.41■□□□□ 0.54
HOXA3-202ENST00000396352 C19orf44Q9H6X5 657 aa18.41■□□□□ 0.54
HOXA3-202ENST00000396352 PRDM4Q9UKN5 801 aa18.41■□□□□ 0.54
HOXA3-202ENST00000396352 GOLGA6L19H0YKK7 550 aa18.41■□□□□ 0.54
HOXA3-202ENST00000396352 M0R2C6 588 aa18.41■□□□□ 0.54
HOXA3-202ENST00000396352 ZNF396Q96N95 335 aaPredicted RBP18.41■□□□□ 0.54
HOXA3-202ENST00000396352 CWC25Q9NXE8 425 aaPredicted RBP18.41■□□□□ 0.54
HOXA3-202ENST00000396352 RNF113AO15541 343 aaKnown RBP18.4■□□□□ 0.54
HOXA3-202ENST00000396352 FDPSP14324 419 aaKnown RBP18.4■□□□□ 0.54
HOXA3-202ENST00000396352 ATP2B3Q16720 1220 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 CCDC73Q6ZRK6 1079 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 A0A087WWV3 80 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 GUCY1B3Q02153 619 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 CHRNA2Q15822 529 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 LRRC8AQ8IWT6 810 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 ZNF594Q96JF6 807 aaPredicted RBP18.4■□□□□ 0.54
HOXA3-202ENST00000396352 PAPPAQ13219 1627 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 SMTNL1A8MU46 457 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 EYA2O00167 538 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 TTLL5Q6EMB2 1281 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 FBXL16Q8N461 479 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 PDCL2Q8N4E4 241 aa18.4■□□□□ 0.54
HOXA3-202ENST00000396352 FOXP2O15409 715 aa18.39■□□□□ 0.53
HOXA3-202ENST00000396352 IFIT1P09914 478 aaKnown RBP18.39■□□□□ 0.53
HOXA3-202ENST00000396352 EVCP57679 992 aa18.39■□□□□ 0.53
HOXA3-202ENST00000396352 A0A1B0GUL7 405 aa18.39■□□□□ 0.53
HOXA3-202ENST00000396352 KINO60870 393 aaKnown RBP18.39■□□□□ 0.53
HOXA3-202ENST00000396352 TNNT1P13805 278 aa18.39■□□□□ 0.53
HOXA3-202ENST00000396352 ARID5BQ14865 1188 aa18.39■□□□□ 0.53
HOXA3-202ENST00000396352 KCPQ6ZWJ8 1503 aa18.39■□□□□ 0.53
HOXA3-202ENST00000396352 FSIP1Q8NA03 581 aa18.38■□□□□ 0.53
HOXA3-202ENST00000396352 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.38■□□□□ 0.53
HOXA3-202ENST00000396352 ME1P48163 572 aa18.38■□□□□ 0.53
HOXA3-202ENST00000396352 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
HOXA3-202ENST00000396352 OSBP2Q969R2 916 aa18.38■□□□□ 0.53
HOXA3-202ENST00000396352 NAP1L2Q9ULW6 460 aaPredicted RBP18.38■□□□□ 0.53
HOXA3-202ENST00000396352 CIAO1O76071 339 aa18.38■□□□□ 0.53
HOXA3-202ENST00000396352 RBM6P78332 1123 aaKnown RBP18.38■□□□□ 0.53
HOXA3-202ENST00000396352 FMR1NBQ8N0W7 255 aaPredicted RBP18.38■□□□□ 0.53
HOXA3-202ENST00000396352 PRDM10Q9NQV6 1147 aa18.38■□□□□ 0.53
HOXA3-202ENST00000396352 PCDHA7Q9UN72 937 aa18.38■□□□□ 0.53
HOXA3-202ENST00000396352 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.37■□□□□ 0.53
HOXA3-202ENST00000396352 PUS3Q9BZE2 481 aaKnown RBP18.37■□□□□ 0.53
HOXA3-202ENST00000396352 GPHNQ9NQX3 736 aaPredicted RBP18.37■□□□□ 0.53
HOXA3-202ENST00000396352 ANO10Q9NW15 660 aa18.37■□□□□ 0.53
HOXA3-202ENST00000396352 RTEL1Q9NZ71 1219 aa18.37■□□□□ 0.53
HOXA3-202ENST00000396352 ERCC4Q92889 916 aaPredicted RBP18.36■□□□□ 0.53
HOXA3-202ENST00000396352 SYCP1Q15431 976 aa18.36■□□□□ 0.53
HOXA3-202ENST00000396352 ATG3Q9NT62 314 aa18.36■□□□□ 0.53
HOXA3-202ENST00000396352 NEDD4P46934 1319 aa18.36■□□□□ 0.53
HOXA3-202ENST00000396352 TPD52L1Q16890 204 aaPredicted RBP18.36■□□□□ 0.53
HOXA3-202ENST00000396352 CCDC191Q8NCU4 936 aa18.36■□□□□ 0.53
HOXA3-202ENST00000396352 PAXBP1Q9Y5B6 917 aa18.36■□□□□ 0.53
HOXA3-202ENST00000396352 MYH7P12883 1935 aa18.35■□□□□ 0.53
HOXA3-202ENST00000396352 USP27XA6NNY8 438 aa18.35■□□□□ 0.53
HOXA3-202ENST00000396352 CBX1P83916 185 aa18.35■□□□□ 0.53
HOXA3-202ENST00000396352 MRPS27Q92552 414 aaKnown RBP18.35■□□□□ 0.53
HOXA3-202ENST00000396352 TNS3Q68CZ2 1445 aa18.35■□□□□ 0.53
HOXA3-202ENST00000396352 C4AP0C0L4 1744 aa18.35■□□□□ 0.53
HOXA3-202ENST00000396352 C4BP0C0L5 1744 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms