RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 ZKSCAN1P17029 563 aaPredicted RBP8.47□□□□□ -1.05
BDNF-207ENST00000395986 HDGFP51858 240 aaKnown RBP8.47□□□□□ -1.05
BDNF-207ENST00000395986 VPS53Q5VIR6 699 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 HDGFL2Q7Z4V5 671 aaPredicted RBP8.47□□□□□ -1.05
BDNF-207ENST00000395986 AFAP1L1Q8TED9 768 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 MED4Q9NPJ6 270 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 PPP2R2CQ9Y2T4 447 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 ADGRL1O94910 1474 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 SCAF11Q99590 1463 aaKnown RBP8.47□□□□□ -1.05
BDNF-207ENST00000395986 GCKP35557 465 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 TXLNAP40222 546 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 RBM5P52756 815 aaKnown RBP eCLIP8.47□□□□□ -1.05
BDNF-207ENST00000395986 SEC62Q99442 399 aaKnown RBP8.47□□□□□ -1.05
BDNF-207ENST00000395986 NAT10Q9H0A0 1025 aaKnown RBP8.47□□□□□ -1.05
BDNF-207ENST00000395986 FANCLQ9NW38 375 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 ODF2LQ9ULJ1 636 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 PPFIA4O75335 1185 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 MEX3CQ5U5Q3 659 aaKnown RBP8.47□□□□□ -1.05
BDNF-207ENST00000395986 TTC14Q96N46 770 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 ADGRL2O95490 1459 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 POGZQ7Z3K3 1410 aa8.47□□□□□ -1.05
BDNF-207ENST00000395986 LRRIQ3A6PVS8 624 aaPredicted RBP8.46□□□□□ -1.05
BDNF-207ENST00000395986 CAND2O75155 1236 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 UPP2O95045 317 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 ATP1A2P50993 1020 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 SNX1Q13596 522 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 ZNF569Q5MCW4 686 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 CCDC150Q8NCX0 1101 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 VEZTQ9HBM0 779 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 TERF2IPQ9NYB0 399 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 EMILIN1Q9Y6C2 1016 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 CCDC196A0A1B0GTZ2 297 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 ERLIN1O75477 346 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 AP1G2O75843 785 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 GSCP56915 257 aaPredicted RBP8.46□□□□□ -1.05
BDNF-207ENST00000395986 FANCCQ00597 558 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 FAM160A1Q05DH4 1040 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 CAPZA3Q96KX2 299 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 CEP89Q96ST8 783 aa8.46□□□□□ -1.05
BDNF-207ENST00000395986 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.05
BDNF-207ENST00000395986 VWA3AA6NCI4 1184 aa8.46□□□□□ -1.06
BDNF-207ENST00000395986 KIAA0754O94854 1291 aa8.46□□□□□ -1.06
BDNF-207ENST00000395986 GNAI2P04899 355 aa8.46□□□□□ -1.06
BDNF-207ENST00000395986 ELF1P32519 619 aa8.46□□□□□ -1.06
BDNF-207ENST00000395986 USP8P40818 1118 aa8.46□□□□□ -1.06
BDNF-207ENST00000395986 IGSF22Q8N9C0 903 aa8.46□□□□□ -1.06
BDNF-207ENST00000395986 PPP6R1Q9UPN7 881 aa8.46□□□□□ -1.06
BDNF-207ENST00000395986 KIF1CO43896 1103 aaKnown RBP8.46□□□□□ -1.06
BDNF-207ENST00000395986 RRS1Q15050 365 aaKnown RBP8.46□□□□□ -1.06
BDNF-207ENST00000395986 OTUD6BQ8N6M0 293 aa8.46□□□□□ -1.06
BDNF-207ENST00000395986 ARHGAP45Q92619 1136 aa8.46□□□□□ -1.06
BDNF-207ENST00000395986 GNL3LQ9NVN8 582 aaKnown RBP8.46□□□□□ -1.06
BDNF-207ENST00000395986 BIN2Q9UBW5 565 aaPredicted RBP8.46□□□□□ -1.06
BDNF-207ENST00000395986 ABCA6Q8N139 1617 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 SGSM2O43147 1006 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 SUGP1Q8IWZ8 645 aaKnown RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 TBC1D31Q96DN5 1066 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 THOC1Q96FV9 657 aaKnown RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 USP28Q96RU2 1077 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 YEATS2Q9ULM3 1422 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 IQSEC2Q5JU85 1478 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 INO80Q9ULG1 1556 aaPredicted RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 EME2A4GXA9 379 aaPredicted RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 PSDA5PKW4 1024 aaPredicted RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 ZNF202O95125 648 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 KIF4AO95239 1232 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 PDCP20941 246 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 CDC25BP30305 580 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 NFE2L2Q16236 605 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 BEND6Q5SZJ8 279 aaPredicted RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 KCTD16Q68DU8 428 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 BLOC1S2Q6QNY1 142 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 ZBTB10Q96DT7 871 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 KAT14Q9H8E8 782 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 SH3BP1Q9Y3L3 701 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 CCDC151A5D8V7 595 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 PPP1R12AO14974 1030 aaPredicted RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 ZSCAN12O43309 604 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 GBP2P32456 591 aaPredicted RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 CCNHP51946 323 aaPredicted RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 EIF5P55010 431 aaKnown RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 NAP1L1P55209 391 aaKnown RBP8.45□□□□□ -1.06
BDNF-207ENST00000395986 NCAPH2Q6IBW4 605 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 CHST3Q7LGC8 479 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 RABGGTAQ92696 567 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 MIEF2Q96C03 454 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 FAM227BQ96M60 508 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 PICK1Q9NRD5 415 aa8.45□□□□□ -1.06
BDNF-207ENST00000395986 CROCC2H7BZ55 1655 aa8.44□□□□□ -1.06
BDNF-207ENST00000395986 GNGT1P63211 74 aa8.44□□□□□ -1.06
BDNF-207ENST00000395986 KCTD19Q17RG1 926 aaPredicted RBP8.44□□□□□ -1.06
BDNF-207ENST00000395986 UBXN6Q9BZV1 441 aa8.44□□□□□ -1.06
BDNF-207ENST00000395986 NCOA5Q9HCD5 579 aaKnown RBP8.44□□□□□ -1.06
BDNF-207ENST00000395986 CPSF2Q9P2I0 782 aaKnown RBP8.44□□□□□ -1.06
BDNF-207ENST00000395986 RBM8AQ9Y5S9 174 aaKnown RBP8.44□□□□□ -1.06
BDNF-207ENST00000395986 ZNF518AQ6AHZ1 1483 aa8.44□□□□□ -1.06
BDNF-207ENST00000395986 SHTN1A0MZ66 631 aa8.44□□□□□ -1.06
BDNF-207ENST00000395986 NDUFAB1O14561 156 aa8.44□□□□□ -1.06
BDNF-207ENST00000395986 ENC1O14682 589 aa8.44□□□□□ -1.06
BDNF-207ENST00000395986 MARCKSP29966 332 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms