RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 PROM2Q8N271 834 aa18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 LINC00116Q8NCU8 138 aa18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 CCDC85AQ96PX6 553 aaPredicted RBP18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 LRRC4BQ9NT99 713 aa18.43■□□□□ 0.54
RAPGEF3-203ENST00000395360 SH3TC1Q8TE82 1336 aa18.42■□□□□ 0.54
RAPGEF3-203ENST00000395360 CLCN1P35523 988 aa18.42■□□□□ 0.54
RAPGEF3-203ENST00000395360 CRKLP46109 303 aaKnown RBP18.42■□□□□ 0.54
RAPGEF3-203ENST00000395360 CCDC87Q9NVE4 849 aa18.42■□□□□ 0.54
RAPGEF3-203ENST00000395360 IFIT1P09914 478 aaKnown RBP18.41■□□□□ 0.54
RAPGEF3-203ENST00000395360 DNM1Q05193 864 aaKnown RBP18.41■□□□□ 0.54
RAPGEF3-203ENST00000395360 STK3Q13188 491 aa18.41■□□□□ 0.54
RAPGEF3-203ENST00000395360 TRIM28Q13263 835 aaKnown RBP18.41■□□□□ 0.54
RAPGEF3-203ENST00000395360 CEP126Q9P2H0 1117 aa18.41■□□□□ 0.54
RAPGEF3-203ENST00000395360 UPF1Q92900 1129 aaKnown RBP eCLIP18.41■□□□□ 0.54
RAPGEF3-203ENST00000395360 UBE2HP62256 183 aa18.4■□□□□ 0.54
RAPGEF3-203ENST00000395360 EN1Q05925 392 aaPredicted RBP18.4■□□□□ 0.54
RAPGEF3-203ENST00000395360 ILDR2Q71H61 639 aa18.4■□□□□ 0.54
RAPGEF3-203ENST00000395360 C4BP0C0L5 1744 aa18.4■□□□□ 0.54
RAPGEF3-203ENST00000395360 PHF14O94880 888 aa18.4■□□□□ 0.54
RAPGEF3-203ENST00000395360 PCCAP05165 728 aaPredicted RBP18.4■□□□□ 0.54
RAPGEF3-203ENST00000395360 KCNQ4P56696 695 aa18.4■□□□□ 0.54
RAPGEF3-203ENST00000395360 INTS5Q6P9B9 1019 aaKnown RBP18.4■□□□□ 0.54
RAPGEF3-203ENST00000395360 RNF214Q8ND24 703 aa18.4■□□□□ 0.54
RAPGEF3-203ENST00000395360 HELLSQ9NRZ9 838 aa18.4■□□□□ 0.54
RAPGEF3-203ENST00000395360 IL6STP40189 918 aaPredicted RBP18.39■□□□□ 0.53
RAPGEF3-203ENST00000395360 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
RAPGEF3-203ENST00000395360 EZH2Q15910 746 aaKnown RBP18.39■□□□□ 0.53
RAPGEF3-203ENST00000395360 ZBTB1Q9Y2K1 713 aa18.39■□□□□ 0.53
RAPGEF3-203ENST00000395360 MAP3K15Q6ZN16 1313 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 PDCP20941 246 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 HLFQ16534 295 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 TAF7LQ5H9L4 462 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 ZMYM1Q5SVZ6 1142 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 GIGYF2Q6Y7W6 1299 aaKnown RBP18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 Q6ZUG5 572 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 CDC37L1Q7L3B6 337 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 TSPY26PQ9H489 355 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 PDIA4P13667 645 aaKnown RBP18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 GPTP24298 496 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 FKBP4Q02790 459 aaKnown RBP eCLIP18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 IFIT5Q13325 482 aaKnown RBP18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 FERMT3Q86UX7 667 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 SYNE4Q8N205 404 aa18.38■□□□□ 0.53
RAPGEF3-203ENST00000395360 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 CSPP1Q1MSJ5 1256 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 STOX1Q6ZVD7 989 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 DEFB132Q7Z7B7 95 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 PLA2G12BQ9BX93 195 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 CSF1RP07333 972 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 ADORA1P30542 326 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 CCDC183Q5T5S1 534 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 XAGE2Q96GT9 111 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 DSCC1Q9BVC3 393 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 LRRC2Q9BYS8 371 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 AKAP2Q9Y2D5 859 aa18.37■□□□□ 0.53
RAPGEF3-203ENST00000395360 RNF113AO15541 343 aaKnown RBP18.36■□□□□ 0.53
RAPGEF3-203ENST00000395360 HSP90B1P14625 803 aaKnown RBP18.36■□□□□ 0.53
RAPGEF3-203ENST00000395360 TICAM2Q86XR7 235 aa18.36■□□□□ 0.53
RAPGEF3-203ENST00000395360 GTF3C6Q969F1 213 aa18.36■□□□□ 0.53
RAPGEF3-203ENST00000395360 PDLIM2Q96JY6 352 aa18.36■□□□□ 0.53
RAPGEF3-203ENST00000395360 AK7Q96M32 723 aa18.36■□□□□ 0.53
RAPGEF3-203ENST00000395360 MAST3O60307 1309 aa18.36■□□□□ 0.53
RAPGEF3-203ENST00000395360 RPS6KA4O75676 772 aa18.35■□□□□ 0.53
RAPGEF3-203ENST00000395360 HSPD1P10809 573 aaKnown RBP18.35■□□□□ 0.53
RAPGEF3-203ENST00000395360 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
RAPGEF3-203ENST00000395360 FGD1P98174 961 aa18.35■□□□□ 0.53
RAPGEF3-203ENST00000395360 TTC39AQ5SRH9 613 aa18.35■□□□□ 0.53
RAPGEF3-203ENST00000395360 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.35■□□□□ 0.53
RAPGEF3-203ENST00000395360 NLRP10Q86W26 655 aa18.35■□□□□ 0.53
RAPGEF3-203ENST00000395360 BRF1Q92994 677 aa18.35■□□□□ 0.53
RAPGEF3-203ENST00000395360 FAM173BQ6P4H8 233 aa18.34■□□□□ 0.53
RAPGEF3-203ENST00000395360 RTCBQ9Y3I0 505 aaKnown RBP18.34■□□□□ 0.53
RAPGEF3-203ENST00000395360 GNPATO15228 680 aa18.34■□□□□ 0.53
RAPGEF3-203ENST00000395360 JAK2O60674 1132 aa18.34■□□□□ 0.53
RAPGEF3-203ENST00000395360 HMGB1P09429 215 aaKnown RBP18.34■□□□□ 0.53
RAPGEF3-203ENST00000395360 A0A0G2JLW4 131 aa18.33■□□□□ 0.53
RAPGEF3-203ENST00000395360 M0R2C6 588 aa18.33■□□□□ 0.53
RAPGEF3-203ENST00000395360 ADRA2BP18089 450 aa18.33■□□□□ 0.53
RAPGEF3-203ENST00000395360 KRT85P78386 507 aa18.33■□□□□ 0.53
RAPGEF3-203ENST00000395360 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.53
RAPGEF3-203ENST00000395360 AKT1S1Q96B36 256 aa18.33■□□□□ 0.53
RAPGEF3-203ENST00000395360 ITGA6P23229 1130 aa18.33■□□□□ 0.52
RAPGEF3-203ENST00000395360 HSP90AB3PQ58FF7 597 aa18.33■□□□□ 0.52
RAPGEF3-203ENST00000395360 TTLL11Q8NHH1 800 aa18.33■□□□□ 0.52
RAPGEF3-203ENST00000395360 OSBP2Q969R2 916 aa18.33■□□□□ 0.52
RAPGEF3-203ENST00000395360 GREM2Q9H772 168 aa18.33■□□□□ 0.52
RAPGEF3-203ENST00000395360 CDHR2Q9BYE9 1310 aa18.33■□□□□ 0.52
RAPGEF3-203ENST00000395360 SPEF2Q9C093 1822 aa18.32■□□□□ 0.52
RAPGEF3-203ENST00000395360 SCARF1Q14162 830 aa18.32■□□□□ 0.52
RAPGEF3-203ENST00000395360 LDHAL6AQ6ZMR3 332 aa18.32■□□□□ 0.52
RAPGEF3-203ENST00000395360 LETM1O95202 739 aaPredicted RBP18.32■□□□□ 0.52
RAPGEF3-203ENST00000395360 SCRN1Q12765 414 aa18.32■□□□□ 0.52
RAPGEF3-203ENST00000395360 ZSCAN30Q86W11 494 aa18.32■□□□□ 0.52
RAPGEF3-203ENST00000395360 UBR3Q6ZT12 1888 aa18.31■□□□□ 0.52
RAPGEF3-203ENST00000395360 E7EWF7 191 aa18.31■□□□□ 0.52
RAPGEF3-203ENST00000395360 LRRFIP1Q32MZ4 808 aaKnown RBP18.31■□□□□ 0.52
RAPGEF3-203ENST00000395360 METTL24Q5JXM2 366 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms