RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 RTL9Q8NET4 1388 aa12.27□□□□□ -0.44
HIF1A-203ENST00000394997 TIMM10P62072 90 aa12.27□□□□□ -0.45
HIF1A-203ENST00000394997 G3BP1Q13283 466 aaKnown RBP eCLIP12.27□□□□□ -0.453e-6■■□□□ 12.1
HIF1A-203ENST00000394997 TTC5Q8N0Z6 440 aa12.27□□□□□ -0.45
HIF1A-203ENST00000394997 TTLL11Q8NHH1 800 aa12.27□□□□□ -0.45
HIF1A-203ENST00000394997 OSBP2Q969R2 916 aa12.27□□□□□ -0.45
HIF1A-203ENST00000394997 GDPD2Q9HCC8 539 aa12.27□□□□□ -0.45
HIF1A-203ENST00000394997 NID2Q14112 1375 aa12.27□□□□□ -0.45
HIF1A-203ENST00000394997 QSER1Q2KHR3 1735 aa12.27□□□□□ -0.45
HIF1A-203ENST00000394997 GJB2P29033 226 aa12.27□□□□□ -0.45
HIF1A-203ENST00000394997 GTF3C6Q969F1 213 aa12.27□□□□□ -0.45
HIF1A-203ENST00000394997 DDX54Q8TDD1 881 aaKnown RBP12.26□□□□□ -0.45
HIF1A-203ENST00000394997 PDRG1Q9NUG6 133 aa12.26□□□□□ -0.45
HIF1A-203ENST00000394997 ELP1O95163 1332 aa12.26□□□□□ -0.45
HIF1A-203ENST00000394997 NECAB1Q8N987 351 aa12.26□□□□□ -0.45
HIF1A-203ENST00000394997 DSCC1Q9BVC3 393 aa12.26□□□□□ -0.45
HIF1A-203ENST00000394997 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
HIF1A-203ENST00000394997 ANKRD31Q8N7Z5 1873 aa12.26□□□□□ -0.45
HIF1A-203ENST00000394997 MCCP23508 829 aa12.26□□□□□ -0.45
HIF1A-203ENST00000394997 NEXNQ0ZGT2 675 aa12.26□□□□□ -0.45
HIF1A-203ENST00000394997 RESTQ13127 1097 aa12.26□□□□□ -0.45
HIF1A-203ENST00000394997 HIP1O00291 1037 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 FDPSP14324 419 aaKnown RBP12.25□□□□□ -0.45
HIF1A-203ENST00000394997 ANTXR2P58335 489 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 SCRN1Q12765 414 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 HMG20BQ9P0W2 317 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 HPS5Q9UPZ3 1129 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 WDR33Q9C0J8 1336 aaKnown RBP12.25□□□□□ -0.45
HIF1A-203ENST00000394997 A0A1B0GUL7 405 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 HSPD1P10809 573 aaKnown RBP12.25□□□□□ -0.45
HIF1A-203ENST00000394997 IL15P40933 162 aaPredicted RBP12.25□□□□□ -0.45
HIF1A-203ENST00000394997 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
HIF1A-203ENST00000394997 ZSCAN30Q86W11 494 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 SH2B1Q9NRF2 756 aaPredicted RBP12.25□□□□□ -0.45
HIF1A-203ENST00000394997 CCDC83Q8IWF9 413 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 HELLSQ9NRZ9 838 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 HDAC5Q9UQL6 1122 aa12.25□□□□□ -0.45
HIF1A-203ENST00000394997 CCDC173Q0VFZ6 552 aa12.24□□□□□ -0.45
HIF1A-203ENST00000394997 MCMDC2Q4G0Z9 681 aa12.24□□□□□ -0.45
HIF1A-203ENST00000394997 TTC6Q86TZ1 520 aa12.24□□□□□ -0.45
HIF1A-203ENST00000394997 TCEANC2Q96MN5 208 aa12.24□□□□□ -0.45
HIF1A-203ENST00000394997 DENND2AQ9ULE3 1009 aa12.24□□□□□ -0.45
HIF1A-203ENST00000394997 ZBTB1Q9Y2K1 713 aa12.24□□□□□ -0.45
HIF1A-203ENST00000394997 CSB-PGBD3P0DP91 1061 aa12.24□□□□□ -0.45
HIF1A-203ENST00000394997 MCAMP43121 646 aa12.24□□□□□ -0.45
HIF1A-203ENST00000394997 DDX46Q7L014 1031 aaKnown RBP12.24□□□□□ -0.45
HIF1A-203ENST00000394997 DIAPH3Q9NSV4 1193 aa12.24□□□□□ -0.45
HIF1A-203ENST00000394997 PAG1Q9NWQ8 432 aa12.24□□□□□ -0.45
HIF1A-203ENST00000394997 MAPK8IP2Q13387 824 aaPredicted RBP12.24□□□□□ -0.45
HIF1A-203ENST00000394997 ARID4AP29374 1257 aaPredicted RBP12.23□□□□□ -0.45
HIF1A-203ENST00000394997 PGBD1Q96JS3 809 aa12.23□□□□□ -0.45
HIF1A-203ENST00000394997 SYCE3A1L190 88 aa12.23□□□□□ -0.45
HIF1A-203ENST00000394997 CHAF1AQ13111 956 aaPredicted RBP12.23□□□□□ -0.45
HIF1A-203ENST00000394997 ITPK1Q13572 414 aa12.23□□□□□ -0.45
HIF1A-203ENST00000394997 PI16Q6UXB8 463 aa12.23□□□□□ -0.45
HIF1A-203ENST00000394997 MARCH10Q8NA82 808 aaPredicted RBP12.23□□□□□ -0.45
HIF1A-203ENST00000394997 GREM2Q9H772 168 aa12.23□□□□□ -0.45
HIF1A-203ENST00000394997 RUFY2Q8WXA3 655 aa12.23□□□□□ -0.45
HIF1A-203ENST00000394997 SPATA31A5Q5VU36 1347 aa12.23□□□□□ -0.45
HIF1A-203ENST00000394997 SPATA31A7Q8IWB4 1347 aa12.23□□□□□ -0.45
HIF1A-203ENST00000394997 JAK2O60674 1132 aa12.22□□□□□ -0.45
HIF1A-203ENST00000394997 PFKFB2O60825 505 aa12.22□□□□□ -0.45
HIF1A-203ENST00000394997 MB21D2Q8IYB1 491 aaPredicted RBP12.22□□□□□ -0.45
HIF1A-203ENST00000394997 NSUN7Q8NE18 718 aaKnown RBP12.22□□□□□ -0.45
HIF1A-203ENST00000394997 ERVV-1B6SEH8 477 aa12.22□□□□□ -0.45
HIF1A-203ENST00000394997 CAMTA2O94983 1202 aa12.22□□□□□ -0.45
HIF1A-203ENST00000394997 DNM1Q05193 864 aaKnown RBP12.22□□□□□ -0.45
HIF1A-203ENST00000394997 ZSCAN31Q96LW9 406 aaPredicted RBP12.22□□□□□ -0.45
HIF1A-203ENST00000394997 PUS7LQ9H0K6 701 aaKnown RBP12.22□□□□□ -0.45
HIF1A-203ENST00000394997 CYP46A1Q9Y6A2 500 aa12.22□□□□□ -0.45
HIF1A-203ENST00000394997 FAM89AQ96GI7 184 aa12.22□□□□□ -0.45
HIF1A-203ENST00000394997 GREB1LQ9C091 1923 aaPredicted RBP12.21□□□□□ -0.45
HIF1A-203ENST00000394997 HCLS1P14317 486 aaPredicted RBP12.21□□□□□ -0.45
HIF1A-203ENST00000394997 XAGE2Q96GT9 111 aa12.21□□□□□ -0.45
HIF1A-203ENST00000394997 GPATCH3Q96I76 525 aa12.21□□□□□ -0.45
HIF1A-203ENST00000394997 FSD1Q9BTV5 496 aa12.21□□□□□ -0.45
HIF1A-203ENST00000394997 AMIGO3Q86WK7 504 aa12.21□□□□□ -0.46
HIF1A-203ENST00000394997 ZMYM6O95789 1325 aa12.21□□□□□ -0.46
HIF1A-203ENST00000394997 E7EWF7 191 aa12.2□□□□□ -0.46
HIF1A-203ENST00000394997 ZBTB22O15209 634 aa12.2□□□□□ -0.46
HIF1A-203ENST00000394997 CTSWP56202 376 aa12.2□□□□□ -0.46
HIF1A-203ENST00000394997 TTLL5Q6EMB2 1281 aa12.2□□□□□ -0.46
HIF1A-203ENST00000394997 ZNF384Q8TF68 577 aa12.2□□□□□ -0.46
HIF1A-203ENST00000394997 NAV1Q8NEY1 1877 aa12.2□□□□□ -0.46
HIF1A-203ENST00000394997 NTSR2O95665 410 aa12.2□□□□□ -0.46
HIF1A-203ENST00000394997 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
HIF1A-203ENST00000394997 HS1BP3Q53T59 392 aa12.2□□□□□ -0.46
HIF1A-203ENST00000394997 MAP7D2Q96T17 732 aa12.2□□□□□ -0.46
HIF1A-203ENST00000394997 CCDC9Q9Y3X0 531 aaKnown RBP12.2□□□□□ -0.46
HIF1A-203ENST00000394997 IL6STP40189 918 aaPredicted RBP12.19□□□□□ -0.46
HIF1A-203ENST00000394997 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
HIF1A-203ENST00000394997 TMOD3Q9NYL9 352 aa12.19□□□□□ -0.46
HIF1A-203ENST00000394997 SIPA1L1O43166 1804 aa12.19□□□□□ -0.46
HIF1A-203ENST00000394997 MBD3O95983 291 aa12.19□□□□□ -0.46
HIF1A-203ENST00000394997 UBE2HP62256 183 aa12.19□□□□□ -0.46
HIF1A-203ENST00000394997 SNW1Q13573 536 aaKnown RBP12.19□□□□□ -0.46
HIF1A-203ENST00000394997 FAM173BQ6P4H8 233 aa12.19□□□□□ -0.46
HIF1A-203ENST00000394997 SHISA4Q96DD7 197 aa12.19□□□□□ -0.46
HIF1A-203ENST00000394997 OS9Q13438 667 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms