RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 WNT10BO00744 389 aa20.49■□□□□ 0.87
SNCA-205ENST00000394991 TTLL12Q14166 644 aaPredicted RBP20.49■□□□□ 0.87
SNCA-205ENST00000394991 NOM1Q5C9Z4 860 aaKnown RBP20.49■□□□□ 0.87
SNCA-205ENST00000394991 R3HDMLQ9H3Y0 253 aa20.49■□□□□ 0.87
SNCA-205ENST00000394991 ELL2O00472 640 aaPredicted RBP20.48■□□□□ 0.87
SNCA-205ENST00000394991 SASH1O94885 1247 aa20.48■□□□□ 0.87
SNCA-205ENST00000394991 FBXO46Q6PJ61 603 aaPredicted RBP20.48■□□□□ 0.87
SNCA-205ENST00000394991 METTL22Q9BUU2 404 aaPredicted RBP20.48■□□□□ 0.87
SNCA-205ENST00000394991 ADAMTS8Q9UP79 889 aa20.48■□□□□ 0.87
SNCA-205ENST00000394991 CTSWP56202 376 aa20.47■□□□□ 0.87
SNCA-205ENST00000394991 PTPN12Q05209 780 aaKnown RBP20.47■□□□□ 0.87
SNCA-205ENST00000394991 WDR43Q15061 677 aaKnown RBP eCLIP20.47■□□□□ 0.87
SNCA-205ENST00000394991 MINPP1Q9UNW1 487 aa20.47■□□□□ 0.87
SNCA-205ENST00000394991 TXNRD3Q86VQ6 643 aa20.46■□□□□ 0.87
SNCA-205ENST00000394991 CDC5LQ99459 802 aaKnown RBP20.46■□□□□ 0.87
SNCA-205ENST00000394991 CFHR5Q9BXR6 569 aa20.46■□□□□ 0.87
SNCA-205ENST00000394991 GREM2Q9H772 168 aa20.46■□□□□ 0.87
SNCA-205ENST00000394991 A0A1B0GUL6 1792 aa20.46■□□□□ 0.87
SNCA-205ENST00000394991 RBBP6Q7Z6E9 1792 aaKnown RBP20.45■□□□□ 0.86
SNCA-205ENST00000394991 NF2P35240 595 aa20.45■□□□□ 0.86
SNCA-205ENST00000394991 CCT4P50991 539 aaKnown RBP20.45■□□□□ 0.86
SNCA-205ENST00000394991 PRKG1Q13976 671 aa20.45■□□□□ 0.86
SNCA-205ENST00000394991 STRIP1Q5VSL9 837 aa20.45■□□□□ 0.86
SNCA-205ENST00000394991 TTLL11Q8NHH1 800 aa20.45■□□□□ 0.86
SNCA-205ENST00000394991 FBXW7Q969H0 707 aa20.45■□□□□ 0.86
SNCA-205ENST00000394991 BSDC1Q9NW68 430 aaPredicted RBP20.45■□□□□ 0.86
SNCA-205ENST00000394991 MYO3BQ8WXR4 1341 aa20.45■□□□□ 0.86
SNCA-205ENST00000394991 FKTNO75072 461 aa20.44■□□□□ 0.86
SNCA-205ENST00000394991 IGKV5-2P06315 115 aa20.44■□□□□ 0.86
SNCA-205ENST00000394991 SREBF2Q12772 1141 aa20.44■□□□□ 0.86
SNCA-205ENST00000394991 OGFOD1Q8N543 542 aa20.44■□□□□ 0.86
SNCA-205ENST00000394991 C8orf58Q8NAV2 365 aa20.44■□□□□ 0.86
SNCA-205ENST00000394991 IFT57Q9NWB7 429 aa20.44■□□□□ 0.86
SNCA-205ENST00000394991 MAP3K2Q9Y2U5 619 aa20.44■□□□□ 0.86
SNCA-205ENST00000394991 KIAA0100Q14667 2235 aaKnown RBP20.43■□□□□ 0.86
SNCA-205ENST00000394991 HTTP42858 3142 aa20.43■□□□□ 0.86
SNCA-205ENST00000394991 LDLRAD1Q5T700 205 aa20.43■□□□□ 0.86
SNCA-205ENST00000394991 COA1Q9GZY4 146 aa20.43■□□□□ 0.86
SNCA-205ENST00000394991 FZD1Q9UP38 647 aa20.43■□□□□ 0.86
SNCA-205ENST00000394991 KLRK1P26718 216 aa20.42■□□□□ 0.86
SNCA-205ENST00000394991 SPRYD7Q5W111 196 aa20.42■□□□□ 0.86
SNCA-205ENST00000394991 ARMC9Q7Z3E5 817 aa20.42■□□□□ 0.86
SNCA-205ENST00000394991 ZBED3Q96IU2 234 aaPredicted RBP20.42■□□□□ 0.86
SNCA-205ENST00000394991 SSC5DA1L4H1 1573 aa20.42■□□□□ 0.86
SNCA-205ENST00000394991 DDX58O95786 925 aaKnown RBP20.41■□□□□ 0.86
SNCA-205ENST00000394991 GNAI1P63096 354 aa20.41■□□□□ 0.86
SNCA-205ENST00000394991 APOBEC3FQ8IUX4 373 aaKnown RBP20.41■□□□□ 0.86
SNCA-205ENST00000394991 COL1A1P02452 1464 aaPredicted RBP20.4■□□□□ 0.86
SNCA-205ENST00000394991 KIAA0825Q8IV33 1275 aa20.4■□□□□ 0.86
SNCA-205ENST00000394991 ANGEL1Q9UNK9 670 aaKnown RBP20.4■□□□□ 0.86
SNCA-205ENST00000394991 OTOFQ9HC10 1997 aa20.39■□□□□ 0.86
SNCA-205ENST00000394991 PI4KAP2A4QPH2 592 aa20.39■□□□□ 0.85
SNCA-205ENST00000394991 CCDC30Q5VVM6 783 aa20.39■□□□□ 0.85
SNCA-205ENST00000394991 TTLL5Q6EMB2 1281 aa20.39■□□□□ 0.85
SNCA-205ENST00000394991 KSR2Q6VAB6 950 aa20.39■□□□□ 0.85
SNCA-205ENST00000394991 TSPYL6Q8N831 410 aa20.39■□□□□ 0.85
SNCA-205ENST00000394991 PI4KAP1Q8N8J0 262 aa20.39■□□□□ 0.85
SNCA-205ENST00000394991 LEMD3Q9Y2U8 911 aa20.39■□□□□ 0.85
SNCA-205ENST00000394991 APAF1O14727 1248 aa20.38■□□□□ 0.85
SNCA-205ENST00000394991 MMP14P50281 582 aa20.38■□□□□ 0.85
SNCA-205ENST00000394991 CWF19L2Q2TBE0 894 aaKnown RBP20.38■□□□□ 0.85
SNCA-205ENST00000394991 ZNF804BA4D1E1 1349 aa20.37■□□□□ 0.85
SNCA-205ENST00000394991 GTF2IP78347 998 aa20.37■□□□□ 0.85
SNCA-205ENST00000394991 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
SNCA-205ENST00000394991 CLMNQ96JQ2 1002 aa20.37■□□□□ 0.85
SNCA-205ENST00000394991 MKI67P46013 3256 aaKnown RBP20.36■□□□□ 0.85
SNCA-205ENST00000394991 POTEFA5A3E0 1075 aa20.36■□□□□ 0.85
SNCA-205ENST00000394991 NEURL1BA8MQ27 555 aa20.36■□□□□ 0.85
SNCA-205ENST00000394991 IGF2BP3O00425 579 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNCA-205ENST00000394991 ALDH1A1P00352 501 aa20.36■□□□□ 0.85
SNCA-205ENST00000394991 OTOP1Q7RTM1 612 aa20.36■□□□□ 0.85
SNCA-205ENST00000394991 UBE3BQ7Z3V4 1068 aa20.36■□□□□ 0.85
SNCA-205ENST00000394991 IFNL1Q8IU54 200 aa20.36■□□□□ 0.85
SNCA-205ENST00000394991 DEFB129Q9H1M3 183 aa20.36■□□□□ 0.85
SNCA-205ENST00000394991 TRIM17Q9Y577 477 aa20.36■□□□□ 0.85
SNCA-205ENST00000394991 PCDHAC2Q9Y5I4 1007 aa20.36■□□□□ 0.85
SNCA-205ENST00000394991 MANSC4A6NHS7 340 aaPredicted RBP20.35■□□□□ 0.85
SNCA-205ENST00000394991 H7C1W4 665 aa20.35■□□□□ 0.85
SNCA-205ENST00000394991 IGHMBP2P38935 993 aaKnown RBP20.35■□□□□ 0.85
SNCA-205ENST00000394991 CALD1Q05682 793 aaKnown RBP20.35■□□□□ 0.85
SNCA-205ENST00000394991 MAP3K11Q16584 847 aa20.35■□□□□ 0.85
SNCA-205ENST00000394991 CERS5Q8N5B7 392 aa20.35■□□□□ 0.85
SNCA-205ENST00000394991 WNK4Q96J92 1243 aa20.35■□□□□ 0.85
SNCA-205ENST00000394991 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.35■□□□□ 0.85
SNCA-205ENST00000394991 IRS2Q9Y4H2 1338 aa20.34■□□□□ 0.85
SNCA-205ENST00000394991 ITGA6P23229 1130 aa20.34■□□□□ 0.85
SNCA-205ENST00000394991 G2E3Q7L622 706 aa20.34■□□□□ 0.85
SNCA-205ENST00000394991 GCC1Q96CN9 775 aa20.34■□□□□ 0.85
SNCA-205ENST00000394991 SLC10A4Q96EP9 437 aa20.34■□□□□ 0.85
SNCA-205ENST00000394991 NEXNQ0ZGT2 675 aa20.33■□□□□ 0.85
SNCA-205ENST00000394991 PLA2G12BQ9BX93 195 aa20.33■□□□□ 0.85
SNCA-205ENST00000394991 ANKRD2Q9GZV1 360 aa20.33■□□□□ 0.85
SNCA-205ENST00000394991 CD209Q9NNX6 404 aa20.33■□□□□ 0.85
SNCA-205ENST00000394991 CENPFP49454 3210 aa20.33■□□□□ 0.84
SNCA-205ENST00000394991 AOX1Q06278 1338 aa20.32■□□□□ 0.84
SNCA-205ENST00000394991 CACNA1FO60840 1977 aa20.32■□□□□ 0.84
SNCA-205ENST00000394991 SNAP23O00161 211 aa20.32■□□□□ 0.84
SNCA-205ENST00000394991 ZBTB48P10074 688 aaPredicted RBP20.32■□□□□ 0.84
SNCA-205ENST00000394991 CASP7P55210 303 aa20.32■□□□□ 0.84
SNCA-205ENST00000394991 INHBEP58166 350 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms