RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 E7EVH7 732 aa15.09■□□□□ 0.01
USP49-203ENST00000394253 PHACTR2O75167 634 aa15.09■□□□□ 0.01
USP49-203ENST00000394253 PPP1R9AQ9ULJ8 1098 aa15.09■□□□□ 0.01
USP49-203ENST00000394253 ZSCAN23Q3MJ62 389 aa15.09■□□□□ 0.01
USP49-203ENST00000394253 VSIG1Q86XK7 387 aa15.09■□□□□ 0.01
USP49-203ENST00000394253 BIN1O00499 593 aa15.09■□□□□ 0.01
USP49-203ENST00000394253 ORC6Q9Y5N6 252 aa15.09■□□□□ 0.01
USP49-203ENST00000394253 IGHMBP2P38935 993 aaKnown RBP15.08■□□□□ 0.01
USP49-203ENST00000394253 TNPO1Q92973 898 aaKnown RBP15.08■□□□□ 0.01
USP49-203ENST00000394253 SAMM50Q9Y512 469 aa15.08■□□□□ 0.01
USP49-203ENST00000394253 SLC4A2P04920 1241 aa15.08■□□□□ 0
USP49-203ENST00000394253 CNGA4Q8IV77 575 aa15.08■□□□□ 0
USP49-203ENST00000394253 MX2P20592 715 aa15.08■□□□□ 0
USP49-203ENST00000394253 TRIM60Q495X7 471 aa15.08■□□□□ 0
USP49-203ENST00000394253 FAM200AQ8TCP9 573 aa15.08■□□□□ 0
USP49-203ENST00000394253 DAAM1Q9Y4D1 1078 aa15.08■□□□□ 0
USP49-203ENST00000394253 IDH1O75874 414 aaKnown RBP15.08■□□□□ 0
USP49-203ENST00000394253 LGSNQ5TDP6 509 aa15.08■□□□□ 0
USP49-203ENST00000394253 CRACR2BQ8N4Y2 399 aaPredicted RBP15.08■□□□□ 0
USP49-203ENST00000394253 SCINQ9Y6U3 715 aa15.08■□□□□ 0
USP49-203ENST00000394253 VPS41P49754 854 aa15.08■□□□□ 0
USP49-203ENST00000394253 ZC3H6P61129 1189 aaKnown RBP15.08■□□□□ 0
USP49-203ENST00000394253 MRPL46Q9H2W6 279 aaKnown RBP15.08■□□□□ 0
USP49-203ENST00000394253 DHX57Q6P158 1386 aaKnown RBP15.07■□□□□ 0
USP49-203ENST00000394253 PPP4R1Q8TF05 950 aa15.07■□□□□ 0
USP49-203ENST00000394253 KIF1BPQ96EK5 621 aa15.07■□□□□ 0
USP49-203ENST00000394253 EPS15L1Q9UBC2 864 aa15.07■□□□□ 0
USP49-203ENST00000394253 PNMA8AQ86V59 439 aaPredicted RBP15.07■□□□□ 0
USP49-203ENST00000394253 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.07■□□□□ 0
USP49-203ENST00000394253 IDEP14735 1019 aa15.07■□□□□ 0
USP49-203ENST00000394253 ESRRGP62508 458 aa15.07■□□□□ 0
USP49-203ENST00000394253 TRIM68Q6AZZ1 485 aa15.07■□□□□ 0
USP49-203ENST00000394253 CCDC117Q8IWD4 279 aaPredicted RBP15.07■□□□□ 0
USP49-203ENST00000394253 UBL4BQ8N7F7 174 aa15.07■□□□□ 0
USP49-203ENST00000394253 PPANQ9NQ55 473 aaKnown RBP15.07■□□□□ 0
USP49-203ENST00000394253 CTTNBP2NLQ9P2B4 639 aa15.07■□□□□ 0
USP49-203ENST00000394253 POTEB3A0JP26 581 aa15.07■□□□□ 0
USP49-203ENST00000394253 POTEBQ6S5H4 581 aa15.07■□□□□ 0
USP49-203ENST00000394253 PAWRQ96IZ0 340 aaKnown RBP15.06■□□□□ 0
USP49-203ENST00000394253 FYCO1Q9BQS8 1478 aa15.06■□□□□ 0
USP49-203ENST00000394253 STAG1Q8WVM7 1258 aa15.06■□□□□ 0
USP49-203ENST00000394253 GTF3C6Q969F1 213 aa15.06■□□□□ 0
USP49-203ENST00000394253 NEK11Q8NG66 645 aa15.06■□□□□ 0
USP49-203ENST00000394253 ZKSCAN5Q9Y2L8 839 aa15.06■□□□□ 0
USP49-203ENST00000394253 TLDC2A0PJX2 215 aa15.06■□□□□ 0
USP49-203ENST00000394253 APOEP02649 317 aa15.06■□□□□ 0
USP49-203ENST00000394253 MUM1L1Q5H9M0 696 aa15.06■□□□□ 0
USP49-203ENST00000394253 NOC2LQ9Y3T9 749 aaKnown RBP15.06■□□□□ 0
USP49-203ENST00000394253 UAP1Q16222 522 aaPredicted RBP15.06■□□□□ 0
USP49-203ENST00000394253 GPRASP1Q5JY77 1395 aa15.06■□□□□ 0
USP49-203ENST00000394253 PDZD8Q8NEN9 1154 aa15.06■□□□□ 0
USP49-203ENST00000394253 POLR3DP05423 398 aaPredicted RBP15.06■□□□□ 0
USP49-203ENST00000394253 NCBP1Q09161 790 aaKnown RBP15.06■□□□□ 0
USP49-203ENST00000394253 NLRP2Q9NX02 1062 aa15.06■□□□□ 0
USP49-203ENST00000394253 GOLGA8QA0A0J9YX86 632 aa15.06■□□□□ 0
USP49-203ENST00000394253 GOLGA8OA6NCC3 632 aa15.06■□□□□ 0
USP49-203ENST00000394253 GOLGA8NF8WBI6 632 aa15.06■□□□□ 0
USP49-203ENST00000394253 ANO6Q4KMQ2 910 aa15.06■□□□□ 0
USP49-203ENST00000394253 CAVIN4Q5BKX8 364 aa15.06■□□□□ 0
USP49-203ENST00000394253 ANKRD20A3Q5VUR7 823 aa15.06■□□□□ 0
USP49-203ENST00000394253 PEX19P40855 299 aa15.05■□□□□ 0
USP49-203ENST00000394253 CABS1Q96KC9 395 aa15.05■□□□□ 0
USP49-203ENST00000394253 SPC25Q9HBM1 224 aa15.05■□□□□ 0
USP49-203ENST00000394253 GOLGA6BA6NDN3 693 aa15.05■□□□□ 0
USP49-203ENST00000394253 PTGS1P23219 599 aa15.05■□□□□ 0
USP49-203ENST00000394253 ARHGAP4P98171 946 aa15.05■□□□□ 0
USP49-203ENST00000394253 BAG5Q9UL15 447 aa15.05■□□□□ 0
USP49-203ENST00000394253 NBPF7P0C2Y1 421 aaPredicted RBP15.05■□□□□ -0
USP49-203ENST00000394253 GFAPP14136 432 aa15.05■□□□□ -0
USP49-203ENST00000394253 PPP2R3AQ06190 1150 aa15.05■□□□□ -0
USP49-203ENST00000394253 SCHIP1Q9P0W5 487 aaPredicted RBP15.05■□□□□ -0
USP49-203ENST00000394253 LMNB2Q03252 620 aa15.05■□□□□ -0
USP49-203ENST00000394253 RPGRIP1Q96KN7 1286 aa15.05■□□□□ -0
USP49-203ENST00000394253 DENND2CQ68D51 928 aa15.05■□□□□ -0
USP49-203ENST00000394253 AGTPBP1Q9UPW5 1226 aa15.05■□□□□ -0
USP49-203ENST00000394253 FNBP4Q8N3X1 1017 aaPredicted RBP15.05■□□□□ -0
USP49-203ENST00000394253 BAG1Q99933 345 aaPredicted RBP15.05■□□□□ -0
USP49-203ENST00000394253 RHOXF2BP0C7M4 288 aa15.04■□□□□ -0
USP49-203ENST00000394253 ATF3P18847 181 aa15.04■□□□□ -0
USP49-203ENST00000394253 PCYT1AP49585 367 aa15.04■□□□□ -0
USP49-203ENST00000394253 MAP3K12Q12852 859 aa15.04■□□□□ -0
USP49-203ENST00000394253 TMEM57Q8N5G2 664 aa15.04■□□□□ -0
USP49-203ENST00000394253 RHOXF2Q9BQY4 288 aa15.04■□□□□ -0
USP49-203ENST00000394253 ZNF213O14771 459 aa15.04■□□□□ -0
USP49-203ENST00000394253 HMG20BQ9P0W2 317 aa15.04■□□□□ -0
USP49-203ENST00000394253 MTMR3Q13615 1198 aa15.04■□□□□ -0
USP49-203ENST00000394253 KIFAP3Q92845 792 aa15.04■□□□□ -0
USP49-203ENST00000394253 KIFC2Q96AC6 838 aa15.04■□□□□ -0
USP49-203ENST00000394253 HCLS1P14317 486 aaPredicted RBP15.04■□□□□ -0
USP49-203ENST00000394253 CCDC68Q9H2F9 335 aa15.04■□□□□ -0
USP49-203ENST00000394253 MX1P20591 662 aa15.04■□□□□ -0
USP49-203ENST00000394253 CHMP4BP1P59074 171 aa15.04■□□□□ -0
USP49-203ENST00000394253 AMOTQ4VCS5 1084 aa15.04■□□□□ -0
USP49-203ENST00000394253 ZNF444Q8N0Y2 327 aaPredicted RBP15.04■□□□□ -0
USP49-203ENST00000394253 GUCA1BQ9UMX6 200 aa15.04■□□□□ -0
USP49-203ENST00000394253 SERPINI2O75830 405 aa15.04■□□□□ -0
USP49-203ENST00000394253 RASIP1Q5U651 963 aa15.04■□□□□ -0
USP49-203ENST00000394253 MINDY4BA8MYZ0 360 aa15.03■□□□□ -0
USP49-203ENST00000394253 PALMDQ9NP74 551 aa15.03■□□□□ -0
USP49-203ENST00000394253 EVI5O60447 810 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms