RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 C9orf78Q9NZ63 289 aaPredicted RBP7.24□□□□□ -1.25
CASC3-202ENST00000394114 EGFL7Q9UHF1 273 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 PXDNLA1KZ92 1463 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 WNK3Q9BYP7 1800 aa7.24□□□□□ -1.25
CASC3-202ENST00000394114 HOXA2O43364 376 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 DDX58O95786 925 aaKnown RBP7.23□□□□□ -1.25
CASC3-202ENST00000394114 IRX5P78411 483 aaPredicted RBP7.23□□□□□ -1.25
CASC3-202ENST00000394114 HDLBPQ00341 1268 aaKnown RBP7.23□□□□□ -1.25
CASC3-202ENST00000394114 COL19A1Q14993 1142 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 FAM200AQ8TCP9 573 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 ASB16Q96NS5 453 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 MYD88Q99836 296 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 UBR2Q8IWV8 1755 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 JCADQ9P266 1359 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 KCPQ6ZWJ8 1503 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 SPATA31A5Q5VU36 1347 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 SPATA31A7Q8IWB4 1347 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 USP17L5A8MUK1 530 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 ATP5J2-PTCD1G3V325 749 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 LZTS3O60299 673 aaPredicted RBP7.23□□□□□ -1.25
CASC3-202ENST00000394114 HMMRO75330 724 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 ANP32AP39687 249 aaKnown RBP7.23□□□□□ -1.25
CASC3-202ENST00000394114 DNAJC10Q8IXB1 793 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 ATG3Q9NT62 314 aa7.23□□□□□ -1.25
CASC3-202ENST00000394114 CUEDC1Q9NWM3 386 aaPredicted RBP7.23□□□□□ -1.25
CASC3-202ENST00000394114 LAMB4A4D0S4 1761 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 MARCH6O60337 910 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 USP46P62068 366 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 MRPL58Q14197 206 aaKnown RBP7.22□□□□□ -1.25
CASC3-202ENST00000394114 TTLL7Q6ZT98 887 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 ANKRD13DQ6ZTN6 518 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 NOL8Q76FK4 1167 aaKnown RBP7.22□□□□□ -1.25
CASC3-202ENST00000394114 LRP10Q7Z4F1 713 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 PPP1R42Q7Z4L9 355 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 UNC5CLQ8IV45 518 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 SLF2Q8IX21 1173 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 CDCA7Q9BWT1 371 aaPredicted RBP7.22□□□□□ -1.25
CASC3-202ENST00000394114 SLIT2O94813 1529 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 DOT1LQ8TEK3 1739 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 TNS2Q63HR2 1409 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 SCAMP3O14828 347 aaKnown RBP7.22□□□□□ -1.25
CASC3-202ENST00000394114 SRGAP3O43295 1099 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 IGKV5-2P06315 115 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 MTMR2Q13614 643 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 MARCH10Q8NA82 808 aaPredicted RBP7.22□□□□□ -1.25
CASC3-202ENST00000394114 LRP6O75581 1613 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 PAPPAQ13219 1627 aa7.22□□□□□ -1.25
CASC3-202ENST00000394114 CFAP99D6REC4 459 aa7.21□□□□□ -1.25
CASC3-202ENST00000394114 ATP8B2P98198 1209 aa7.21□□□□□ -1.25
CASC3-202ENST00000394114 RAD51AP2Q09MP3 1159 aa7.21□□□□□ -1.25
CASC3-202ENST00000394114 NEXNQ0ZGT2 675 aa7.21□□□□□ -1.25
CASC3-202ENST00000394114 SWI5Q1ZZU3 235 aa7.21□□□□□ -1.25
CASC3-202ENST00000394114 MEX3CQ5U5Q3 659 aaKnown RBP7.21□□□□□ -1.25
CASC3-202ENST00000394114 CC2D2BQ6DHV5 1058 aa7.21□□□□□ -1.25
CASC3-202ENST00000394114 LINS1Q8NG48 757 aa7.21□□□□□ -1.25
CASC3-202ENST00000394114 OCEL1Q9H607 264 aa7.21□□□□□ -1.25
CASC3-202ENST00000394114 NWD2Q9ULI1 1742 aa7.21□□□□□ -1.25
CASC3-202ENST00000394114 AFDNP55196 1824 aaKnown RBP7.21□□□□□ -1.26
CASC3-202ENST00000394114 MKRN1Q9UHC7 482 aaKnown RBP7.21□□□□□ -1.26
CASC3-202ENST00000394114 BCL9LQ86UU0 1499 aa7.21□□□□□ -1.26
CASC3-202ENST00000394114 ARFGEF2Q9Y6D5 1785 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 GRM8O00222 908 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 ALDH1L1O75891 902 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 NR6A1Q15406 480 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 TSHZ3Q63HK5 1081 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 SLC4A9Q96Q91 983 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 USP21Q9UK80 565 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 BRPF3Q9ULD4 1205 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 TMA7Q9Y2S6 64 aaKnown RBP7.2□□□□□ -1.26
CASC3-202ENST00000394114 BCL9O00512 1426 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 NEURL1BA8MQ27 555 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 PPP1R3GB7ZBB8 358 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 KCNQ2O43526 872 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 SURF6O75683 361 aaKnown RBP7.2□□□□□ -1.26
CASC3-202ENST00000394114 SKIP12755 728 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 LDLRAD1Q5T700 205 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 TSC1Q92574 1164 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 SUCLG2Q96I99 432 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 DNAJC2Q99543 621 aaKnown RBP7.2□□□□□ -1.26
CASC3-202ENST00000394114 METTL22Q9BUU2 404 aaPredicted RBP7.2□□□□□ -1.26
CASC3-202ENST00000394114 TANGO6Q9C0B7 1094 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 IL1RAPL2Q9NP60 686 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 THRAP3Q9Y2W1 955 aaKnown RBP7.2□□□□□ -1.26
CASC3-202ENST00000394114 NR1H3Q13133 447 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 UBE3BQ7Z3V4 1068 aa7.2□□□□□ -1.26
CASC3-202ENST00000394114 TLDC2A0PJX2 215 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 RASA1P20936 1047 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 MAPK1P28482 360 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 GCKRQ14397 625 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 ANKMY2Q8IV38 441 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 DEPDC4Q8N2C3 294 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 SSH3Q8TE77 659 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 KAZALD1Q96I82 304 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 BICC1Q9H694 974 aaKnown RBP7.19□□□□□ -1.26
CASC3-202ENST00000394114 PA2G4Q9UQ80 394 aaKnown RBP7.19□□□□□ -1.26
CASC3-202ENST00000394114 H3BRB1 525 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 ICMTO60725 284 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 DNAJB2P25686 324 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 OS9Q13438 667 aaPredicted RBP7.19□□□□□ -1.26
CASC3-202ENST00000394114 VPS72Q15906 364 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms