RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 USP17L1Q7RTZ2 530 aa38.61■■■■□ 3.77
CMTM4-202ENST00000394106 SAMD7Q7Z3H4 446 aa38.61■■■■□ 3.77
CMTM4-202ENST00000394106 FBXW7Q969H0 707 aa38.61■■■■□ 3.77
CMTM4-202ENST00000394106 FRAT1Q92837 279 aaPredicted RBP38.6■■■■□ 3.77
CMTM4-202ENST00000394106 KLRG1Q96E93 195 aa38.6■■■■□ 3.77
CMTM4-202ENST00000394106 PUS3Q9BZE2 481 aaKnown RBP38.6■■■■□ 3.77
CMTM4-202ENST00000394106 CREBZFQ9NS37 354 aa38.6■■■■□ 3.77
CMTM4-202ENST00000394106 TBC1D10BQ4KMP7 808 aaPredicted RBP38.59■■■■□ 3.77
CMTM4-202ENST00000394106 IPO8O15397 1037 aaKnown RBP38.58■■■■□ 3.77
CMTM4-202ENST00000394106 UBTFL1P0CB47 393 aaPredicted RBP38.58■■■■□ 3.77
CMTM4-202ENST00000394106 RBM26Q5T8P6 1007 aaKnown RBP38.58■■■■□ 3.77
CMTM4-202ENST00000394106 AGBL3Q8NEM8 1001 aa38.57■■■■□ 3.76
CMTM4-202ENST00000394106 TMEM88BA6NKF7 163 aa38.55■■■■□ 3.76
CMTM4-202ENST00000394106 EGFRP00533 1210 aa38.55■■■■□ 3.76
CMTM4-202ENST00000394106 ZC3H15Q8WU90 426 aaKnown RBP38.54■■■■□ 3.76
CMTM4-202ENST00000394106 ZNF609O15014 1411 aa38.54■■■■□ 3.76
CMTM4-202ENST00000394106 TRAF5O00463 557 aa38.53■■■■□ 3.76
CMTM4-202ENST00000394106 TRIM27P14373 513 aa38.53■■■■□ 3.76
CMTM4-202ENST00000394106 FMR1Q06787 632 aaKnown RBP eCLIP38.53■■■■□ 3.76
CMTM4-202ENST00000394106 KLHDC4Q8TBB5 520 aa38.53■■■■□ 3.76
CMTM4-202ENST00000394106 MXD3Q9BW11 206 aa38.53■■■■□ 3.76
CMTM4-202ENST00000394106 PGAP2Q9UHJ9 254 aa38.53■■■■□ 3.76
CMTM4-202ENST00000394106 IRS2Q9Y4H2 1338 aa38.53■■■■□ 3.76
CMTM4-202ENST00000394106 KIF4BQ2VIQ3 1234 aa38.52■■■■□ 3.76
CMTM4-202ENST00000394106 INTS3Q68E01 1043 aaKnown RBP38.52■■■■□ 3.76
CMTM4-202ENST00000394106 ATF7IPQ6VMQ6 1270 aa38.52■■■■□ 3.76
CMTM4-202ENST00000394106 C15orf52Q6ZUT6 534 aaKnown RBP38.52■■■■□ 3.76
CMTM4-202ENST00000394106 TNNQ9UQP3 1299 aa38.52■■■■□ 3.76
CMTM4-202ENST00000394106 RIPOR2Q9Y4F9 1068 aa38.52■■■■□ 3.76
CMTM4-202ENST00000394106 LRRC24Q50LG9 513 aa38.51■■■■□ 3.76
CMTM4-202ENST00000394106 DACT2Q5SW24 774 aa38.51■■■■□ 3.76
CMTM4-202ENST00000394106 STRIP1Q5VSL9 837 aa38.51■■■■□ 3.76
CMTM4-202ENST00000394106 GMLQ99445 158 aa38.51■■■■□ 3.76
CMTM4-202ENST00000394106 GLIS2Q9BZE0 524 aaPredicted RBP38.51■■■■□ 3.76
CMTM4-202ENST00000394106 CD209Q9NNX6 404 aa38.51■■■■□ 3.76
CMTM4-202ENST00000394106 MROH5Q6ZUA9 1318 aa38.51■■■■□ 3.76
CMTM4-202ENST00000394106 ZNF646O15015 1829 aaPredicted RBP38.51■■■■□ 3.76
CMTM4-202ENST00000394106 ZNF804AQ7Z570 1209 aa38.5■■■■□ 3.75
CMTM4-202ENST00000394106 MEIS3Q99687 375 aa38.5■■■■□ 3.75
CMTM4-202ENST00000394106 USP17L8P0C7I0 530 aa38.49■■■■□ 3.75
CMTM4-202ENST00000394106 TTLL5Q6EMB2 1281 aa38.49■■■■□ 3.75
CMTM4-202ENST00000394106 CLUAP1Q96AJ1 413 aa38.49■■■■□ 3.75
CMTM4-202ENST00000394106 MKRN1Q9UHC7 482 aaKnown RBP38.49■■■■□ 3.75
CMTM4-202ENST00000394106 LRRFIP2Q9Y608 721 aaKnown RBP38.49■■■■□ 3.75
CMTM4-202ENST00000394106 ZNF280AP59817 542 aaPredicted RBP38.48■■■■□ 3.75
CMTM4-202ENST00000394106 GTF2IP78347 998 aa38.48■■■■□ 3.75
CMTM4-202ENST00000394106 METTL24Q5JXM2 366 aa38.48■■■■□ 3.75
CMTM4-202ENST00000394106 HDAC5Q9UQL6 1122 aa38.48■■■■□ 3.75
CMTM4-202ENST00000394106 UBE4AQ14139 1066 aa38.47■■■■□ 3.75
CMTM4-202ENST00000394106 TRPM7Q96QT4 1865 aa38.46■■■■□ 3.75
CMTM4-202ENST00000394106 MYO3BQ8WXR4 1341 aa38.45■■■■□ 3.75
CMTM4-202ENST00000394106 RFX5P48382 616 aaPredicted RBP38.45■■■■□ 3.75
CMTM4-202ENST00000394106 ZKSCAN2Q63HK3 967 aa38.45■■■■□ 3.75
CMTM4-202ENST00000394106 CDC37L1Q7L3B6 337 aa38.45■■■■□ 3.75
CMTM4-202ENST00000394106 MYOZ2Q9NPC6 264 aa38.44■■■■□ 3.74
CMTM4-202ENST00000394106 USP48Q86UV5 1035 aa38.43■■■■□ 3.74
CMTM4-202ENST00000394106 ABT1Q9ULW3 272 aaKnown RBP38.43■■■■□ 3.74
CMTM4-202ENST00000394106 GNAI3P08754 354 aa38.42■■■■□ 3.74
CMTM4-202ENST00000394106 IL1R1P14778 569 aa38.42■■■■□ 3.74
CMTM4-202ENST00000394106 JMYQ8N9B5 988 aa38.42■■■■□ 3.74
CMTM4-202ENST00000394106 DCPSQ96C86 337 aaKnown RBP38.42■■■■□ 3.74
CMTM4-202ENST00000394106 GYG1P46976 350 aa38.41■■■■□ 3.74
CMTM4-202ENST00000394106 OGFOD1Q8N543 542 aa38.41■■■■□ 3.74
CMTM4-202ENST00000394106 ASTN2O75129 1339 aaPredicted RBP38.4■■■■□ 3.74
CMTM4-202ENST00000394106 PTPN12Q05209 780 aaKnown RBP38.4■■■■□ 3.74
CMTM4-202ENST00000394106 CST9Q5W186 159 aa38.4■■■■□ 3.74
CMTM4-202ENST00000394106 KRT26Q7Z3Y9 468 aa38.4■■■■□ 3.74
CMTM4-202ENST00000394106 GGA3Q9NZ52 723 aa38.4■■■■□ 3.74
CMTM4-202ENST00000394106 POLR2AP24928 1970 aaKnown RBP38.4■■■■□ 3.74
CMTM4-202ENST00000394106 CNTNAP1P78357 1384 aa38.4■■■■□ 3.74
CMTM4-202ENST00000394106 EYA2O00167 538 aa38.39■■■■□ 3.74
CMTM4-202ENST00000394106 PDE8BO95263 885 aa38.39■■■■□ 3.74
CMTM4-202ENST00000394106 CELF2O95319 508 aaKnown RBP38.39■■■■□ 3.74
CMTM4-202ENST00000394106 SCARF1Q14162 830 aa38.39■■■■□ 3.74
CMTM4-202ENST00000394106 KIAA0825Q8IV33 1275 aa38.39■■■■□ 3.74
CMTM4-202ENST00000394106 VGLL2Q8N8G2 317 aa38.39■■■■□ 3.74
CMTM4-202ENST00000394106 ZNF408Q9H9D4 720 aa38.39■■■■□ 3.74
CMTM4-202ENST00000394106 SIL1Q9H173 461 aa38.38■■■■□ 3.73
CMTM4-202ENST00000394106 JAG2Q9Y219 1238 aa38.38■■■■□ 3.73
CMTM4-202ENST00000394106 HIBADHP31937 336 aaKnown RBP38.37■■■■□ 3.73
CMTM4-202ENST00000394106 DLK2Q6UY11 383 aa38.37■■■■□ 3.73
CMTM4-202ENST00000394106 TMEM57Q8N5G2 664 aa38.37■■■■□ 3.73
CMTM4-202ENST00000394106 FAM84BQ96KN1 310 aaPredicted RBP38.37■■■■□ 3.73
CMTM4-202ENST00000394106 ADM5C9JUS6 153 aa38.36■■■■□ 3.73
CMTM4-202ENST00000394106 ANGEL2Q5VTE6 544 aaKnown RBP38.35■■■■□ 3.73
CMTM4-202ENST00000394106 HDAC9Q9UKV0 1011 aa38.35■■■■□ 3.73
CMTM4-202ENST00000394106 DEFB115Q30KQ5 88 aa38.34■■■■□ 3.73
CMTM4-202ENST00000394106 VPS37DQ86XT2 251 aa38.34■■■■□ 3.73
CMTM4-202ENST00000394106 SULF1Q8IWU6 871 aa38.34■■■■□ 3.73
CMTM4-202ENST00000394106 CERS5Q8N5B7 392 aa38.34■■■■□ 3.73
CMTM4-202ENST00000394106 ATG9AQ7Z3C6 839 aa38.33■■■■□ 3.73
CMTM4-202ENST00000394106 FTSJ3Q8IY81 847 aaKnown RBP38.33■■■■□ 3.73
CMTM4-202ENST00000394106 RASSF10A6NK89 507 aa38.32■■■■□ 3.72
CMTM4-202ENST00000394106 PUM3Q15397 648 aaKnown RBP38.32■■■■□ 3.72
CMTM4-202ENST00000394106 TDRD7Q8NHU6 1098 aaKnown RBP38.32■■■■□ 3.72
CMTM4-202ENST00000394106 PA2G4Q9UQ80 394 aaKnown RBP38.32■■■■□ 3.72
CMTM4-202ENST00000394106 SASH1O94885 1247 aa38.31■■■■□ 3.72
CMTM4-202ENST00000394106 VEGFBP49765 207 aa38.31■■■■□ 3.72
CMTM4-202ENST00000394106 NBPF9Q3BBW0 867 aa38.31■■■■□ 3.72
CMTM4-202ENST00000394106 CAVIN4Q5BKX8 364 aa38.31■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms