RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 CXorf38Q8TB03 319 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 MAPK8IP1Q9UQF2 711 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 PREX1Q8TCU6 1659 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 PPFIA4O75335 1185 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 ATP6V1G1O75348 118 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 CDCA2Q69YH5 1023 aaPredicted RBP13.13□□□□□ -0.31
LAMB1-203ENST00000393560 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 NUP133Q8WUM0 1156 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 UBXN4Q92575 508 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
LAMB1-203ENST00000393560 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
LAMB1-203ENST00000393560 ISM2Q6H9L7 571 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 EPAS1Q99814 870 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 ANKIB1Q9P2G1 1089 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
LAMB1-203ENST00000393560 ADGRB1O14514 1584 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 CAVIN2O95810 425 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 NAT2P11245 290 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 CLTCQ00610 1675 aaKnown RBP13.12□□□□□ -0.31
LAMB1-203ENST00000393560 IFT88Q13099 833 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
LAMB1-203ENST00000393560 GORABQ5T7V8 394 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 DNAI1Q9UI46 699 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.12□□□□□ -0.31
LAMB1-203ENST00000393560 ACTN3Q08043 901 aaPredicted RBP13.12□□□□□ -0.31
LAMB1-203ENST00000393560 MPP3Q13368 585 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 KIAA1328Q86T90 577 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 ZGPATQ8N5A5 531 aaKnown RBP13.12□□□□□ -0.31
LAMB1-203ENST00000393560 TBC1D7Q9P0N9 293 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 AKAP2Q9Y2D5 859 aa13.12□□□□□ -0.31
LAMB1-203ENST00000393560 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
LAMB1-203ENST00000393560 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
LAMB1-203ENST00000393560 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.11□□□□□ -0.31
LAMB1-203ENST00000393560 PRPF4BQ13523 1007 aaKnown RBP13.11□□□□□ -0.31
LAMB1-203ENST00000393560 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
LAMB1-203ENST00000393560 HSP90AB2PQ58FF8 381 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 ACBD5Q5T8D3 534 aaPredicted RBP13.11□□□□□ -0.31
LAMB1-203ENST00000393560 CCDC114Q96M63 670 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 UNC45AQ9H3U1 944 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
LAMB1-203ENST00000393560 CCDC171Q6TFL3 1326 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
LAMB1-203ENST00000393560 GADD45BO75293 160 aaPredicted RBP13.11□□□□□ -0.31
LAMB1-203ENST00000393560 GJA8P48165 433 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 E2F5Q15329 346 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 NYAP1Q6ZVC0 841 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 TMC6Q7Z403 805 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 CEP57Q86XR8 500 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 FAM81AQ8TBF8 368 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 CEP126Q9P2H0 1117 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 RABL2BQ9UNT1 228 aa13.11□□□□□ -0.31
LAMB1-203ENST00000393560 MYO1FO00160 1098 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 ZNF189O75820 626 aaPredicted RBP13.1□□□□□ -0.31
LAMB1-203ENST00000393560 XBP1P17861 261 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 FBLN1P23142 703 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 CEBPAP49715 358 aaPredicted RBP13.1□□□□□ -0.31
LAMB1-203ENST00000393560 CC2D1AQ6P1N0 951 aaPredicted RBP13.1□□□□□ -0.31
LAMB1-203ENST00000393560 TRMT2AQ8IZ69 625 aaKnown RBP13.1□□□□□ -0.31
LAMB1-203ENST00000393560 LMBR1Q8WVP7 490 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 PRAM1Q96QH2 718 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 CAPN7Q9Y6W3 813 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 SPDYE3A6NKU9 549 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 SMARCA5O60264 1052 aaPredicted RBP13.1□□□□□ -0.31
LAMB1-203ENST00000393560 CYP11B2P19099 503 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 IQCB1Q15051 598 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 PUS10Q3MIT2 529 aaKnown RBP13.1□□□□□ -0.31
LAMB1-203ENST00000393560 CACTINQ8WUQ7 758 aaKnown RBP13.1□□□□□ -0.31
LAMB1-203ENST00000393560 AGAP3Q96P47 875 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 PARD6BQ9BYG5 372 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 EPC1Q9H2F5 836 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 GDPD2Q9HCC8 539 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 SPATA7Q9P0W8 599 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 KDM5AP29375 1690 aaKnown RBP13.1□□□□□ -0.31
LAMB1-203ENST00000393560 KAT6BQ8WYB5 2073 aa13.1□□□□□ -0.31
LAMB1-203ENST00000393560 INPP5BP32019 993 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 CDR1P51861 262 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 GNAI1P63096 354 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 WLSQ5T9L3 541 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 THUMPD2Q9BTF0 503 aaKnown RBP13.09□□□□□ -0.31
LAMB1-203ENST00000393560 NACA2Q9H009 215 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 BICC1Q9H694 974 aaKnown RBP13.09□□□□□ -0.31
LAMB1-203ENST00000393560 RGL1Q9NZL6 768 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 LRRC10BA6NIK2 292 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 TTC30AQ86WT1 665 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 TRAIPQ9BWF2 469 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 TRIM4Q9C037 500 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 ZCWPW1Q9H0M4 648 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 MYO6Q9UM54 1294 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.09□□□□□ -0.31
LAMB1-203ENST00000393560 FAM169AQ9Y6X4 670 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 MYOM1P52179 1685 aa13.09□□□□□ -0.31
LAMB1-203ENST00000393560 RPSAP08865 295 aaKnown RBP13.08□□□□□ -0.31
LAMB1-203ENST00000393560 TCP11L2Q8N4U5 519 aa13.08□□□□□ -0.31
LAMB1-203ENST00000393560 SMCR8Q8TEV9 937 aaPredicted RBP13.08□□□□□ -0.31
LAMB1-203ENST00000393560 CLIC6Q96NY7 704 aa13.08□□□□□ -0.31
LAMB1-203ENST00000393560 SETBP1Q9Y6X0 1596 aa13.08□□□□□ -0.31
LAMB1-203ENST00000393560 ELP1O95163 1332 aa13.08□□□□□ -0.32
LAMB1-203ENST00000393560 ZEB2O60315 1214 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms