RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 GLRX3O76003 335 aaKnown RBP13.22□□□□□ -0.29
PDGFD-202ENST00000393158 PTGER2P43116 358 aa13.22□□□□□ -0.29
PDGFD-202ENST00000393158 IL27Q8NEV9 243 aa13.22□□□□□ -0.29
PDGFD-202ENST00000393158 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
PDGFD-202ENST00000393158 RPS8P62241 208 aaKnown RBP13.22□□□□□ -0.29
PDGFD-202ENST00000393158 BOLA2Q9H3K6 86 aa13.22□□□□□ -0.29
PDGFD-202ENST00000393158 RFX7Q2KHR2 1363 aa13.22□□□□□ -0.29
PDGFD-202ENST00000393158 CYP2E1P05181 493 aaPredicted RBP13.22□□□□□ -0.29
PDGFD-202ENST00000393158 PUM3Q15397 648 aaKnown RBP13.22□□□□□ -0.29
PDGFD-202ENST00000393158 BAZ2AQ9UIF9 1905 aaKnown RBP13.22□□□□□ -0.29
PDGFD-202ENST00000393158 CCDC102BQ68D86 513 aa13.21□□□□□ -0.29
PDGFD-202ENST00000393158 NPM2Q86SE8 214 aaKnown RBP13.21□□□□□ -0.29
PDGFD-202ENST00000393158 USP26Q9BXU7 913 aa13.21□□□□□ -0.29
PDGFD-202ENST00000393158 CDC45O75419 566 aa13.21□□□□□ -0.29
PDGFD-202ENST00000393158 ATP2B3Q16720 1220 aa13.21□□□□□ -0.29
PDGFD-202ENST00000393158 A0A0D9SFI3 127 aa13.21□□□□□ -0.3
PDGFD-202ENST00000393158 TCRBV5S4A2TA0A5A2 114 aa13.21□□□□□ -0.3
PDGFD-202ENST00000393158 IFIT2P09913 472 aaKnown RBP13.21□□□□□ -0.3
PDGFD-202ENST00000393158 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.3
PDGFD-202ENST00000393158 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.3
PDGFD-202ENST00000393158 RASGRF1Q13972 1273 aa13.2□□□□□ -0.3
PDGFD-202ENST00000393158 METTL24Q5JXM2 366 aa13.2□□□□□ -0.3
PDGFD-202ENST00000393158 LPIN2Q92539 896 aa13.2□□□□□ -0.3
PDGFD-202ENST00000393158 FAM84BQ96KN1 310 aaPredicted RBP13.2□□□□□ -0.3
PDGFD-202ENST00000393158 FAM227BQ96M60 508 aa13.2□□□□□ -0.3
PDGFD-202ENST00000393158 TIAM2Q8IVF5 1701 aa13.2□□□□□ -0.3
PDGFD-202ENST00000393158 ZNF589Q86UQ0 364 aaPredicted RBP13.2□□□□□ -0.3
PDGFD-202ENST00000393158 CRAMP1Q96RY5 1269 aa13.2□□□□□ -0.3
PDGFD-202ENST00000393158 DICER1Q9UPY3 1922 aaKnown RBP13.2□□□□□ -0.3
PDGFD-202ENST00000393158 SIPA1L1O43166 1804 aa13.2□□□□□ -0.3
PDGFD-202ENST00000393158 LSG1Q9H089 658 aaKnown RBP13.2□□□□□ -0.3
PDGFD-202ENST00000393158 STK32BQ9NY57 414 aa13.2□□□□□ -0.3
PDGFD-202ENST00000393158 CEP126Q9P2H0 1117 aa13.2□□□□□ -0.3
PDGFD-202ENST00000393158 SGSM2O43147 1006 aa13.19□□□□□ -0.3
PDGFD-202ENST00000393158 BCAMP50895 628 aa13.19□□□□□ -0.3
PDGFD-202ENST00000393158 GPSM2P81274 684 aa13.19□□□□□ -0.3
PDGFD-202ENST00000393158 FBXO33Q7Z6M2 555 aa13.19□□□□□ -0.3
PDGFD-202ENST00000393158 ANKRD18AQ8IVF6 992 aa13.19□□□□□ -0.3
PDGFD-202ENST00000393158 POLLQ9UGP5 575 aa13.19□□□□□ -0.3
PDGFD-202ENST00000393158 CNNM1Q9NRU3 951 aa13.19□□□□□ -0.3
PDGFD-202ENST00000393158 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
PDGFD-202ENST00000393158 C15orf52Q6ZUT6 534 aaKnown RBP13.19□□□□□ -0.3
PDGFD-202ENST00000393158 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
PDGFD-202ENST00000393158 ZAP70P43403 619 aa13.18□□□□□ -0.3
PDGFD-202ENST00000393158 EVI5LQ96CN4 794 aa13.18□□□□□ -0.3
PDGFD-202ENST00000393158 CDC5LQ99459 802 aaKnown RBP13.18□□□□□ -0.3
PDGFD-202ENST00000393158 TAF6LQ9Y6J9 622 aa13.18□□□□□ -0.3
PDGFD-202ENST00000393158 GPR101Q96P66 508 aaPredicted RBP13.18□□□□□ -0.3
PDGFD-202ENST00000393158 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
PDGFD-202ENST00000393158 CD2BP2O95400 341 aaKnown RBP13.17□□□□□ -0.3
PDGFD-202ENST00000393158 PALD1Q9ULE6 856 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
PDGFD-202ENST00000393158 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 MSH5O43196 834 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
PDGFD-202ENST00000393158 CHRNA5P30532 468 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 GYG1P46976 350 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 ST5P78524 1137 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 PTH1RQ03431 593 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 UBE4AQ14139 1066 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 ADGRA1Q86SQ6 560 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 KBTBD3Q8NAB2 608 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 KCNB2Q92953 911 aa13.17□□□□□ -0.3
PDGFD-202ENST00000393158 IGHMBP2P38935 993 aaKnown RBP13.16□□□□□ -0.3
PDGFD-202ENST00000393158 PAG1Q9NWQ8 432 aa13.16□□□□□ -0.3
PDGFD-202ENST00000393158 NEUROD6Q96NK8 337 aa13.16□□□□□ -0.3
PDGFD-202ENST00000393158 MPHOSPH8Q99549 860 aa13.16□□□□□ -0.3
PDGFD-202ENST00000393158 A0A0G2JLW4 131 aa13.16□□□□□ -0.3
PDGFD-202ENST00000393158 HSP90B1P14625 803 aaKnown RBP13.16□□□□□ -0.3
PDGFD-202ENST00000393158 NMIQ13287 307 aaPredicted RBP13.16□□□□□ -0.3
PDGFD-202ENST00000393158 GRIK5Q16478 980 aa13.15□□□□□ -0.3
PDGFD-202ENST00000393158 NKX2-3Q8TAU0 364 aa13.15□□□□□ -0.3
PDGFD-202ENST00000393158 RILPL2Q969X0 211 aa13.15□□□□□ -0.3
PDGFD-202ENST00000393158 NAV1Q8NEY1 1877 aa13.15□□□□□ -0.3
PDGFD-202ENST00000393158 ERC2O15083 957 aa13.15□□□□□ -0.3
PDGFD-202ENST00000393158 ATP6V0A2Q9Y487 856 aa13.15□□□□□ -0.3
PDGFD-202ENST00000393158 SLC16A10Q8TF71 515 aa13.15□□□□□ -0.3
PDGFD-202ENST00000393158 PDS5AQ29RF7 1337 aaKnown RBP13.14□□□□□ -0.31
PDGFD-202ENST00000393158 M0R2C6 588 aa13.14□□□□□ -0.31
PDGFD-202ENST00000393158 GOLIM4O00461 696 aa13.14□□□□□ -0.31
PDGFD-202ENST00000393158 MFAP1P55081 439 aaKnown RBP13.14□□□□□ -0.31
PDGFD-202ENST00000393158 TAF7LQ5H9L4 462 aa13.14□□□□□ -0.31
PDGFD-202ENST00000393158 OSBP2Q969R2 916 aa13.14□□□□□ -0.31
PDGFD-202ENST00000393158 NPR1P16066 1061 aa13.14□□□□□ -0.31
PDGFD-202ENST00000393158 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
PDGFD-202ENST00000393158 TBC1D16Q8TBP0 767 aa13.14□□□□□ -0.31
PDGFD-202ENST00000393158 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
PDGFD-202ENST00000393158 RAD50Q92878 1312 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 R3HDM1Q15032 1099 aaKnown RBP13.13□□□□□ -0.31
PDGFD-202ENST00000393158 ZMYM1Q5SVZ6 1142 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 RTFDC1Q9BY42 306 aaPredicted RBP13.13□□□□□ -0.31
PDGFD-202ENST00000393158 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 ZBTB7AO95365 584 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 SPATA5Q8NB90 893 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 WWC3Q9ULE0 1092 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 MAST3O60307 1309 aa13.13□□□□□ -0.31
PDGFD-202ENST00000393158 BBOX1O75936 387 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms