RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 CNTROBQ8N137 903 aa14.83□□□□□ -0.03
RFC4-202ENST00000392481 PUS3Q9BZE2 481 aaKnown RBP14.83□□□□□ -0.03
RFC4-202ENST00000392481 RIPOR2Q9Y4F9 1068 aa14.83□□□□□ -0.03
RFC4-202ENST00000392481 ZNF609O15014 1411 aa14.83□□□□□ -0.03
RFC4-202ENST00000392481 MROH5Q6ZUA9 1318 aa14.83□□□□□ -0.04
RFC4-202ENST00000392481 PASKQ96RG2 1323 aa14.83□□□□□ -0.04
RFC4-202ENST00000392481 IRS2Q9Y4H2 1338 aa14.83□□□□□ -0.04
RFC4-202ENST00000392481 SNAP23O00161 211 aa14.83□□□□□ -0.04
RFC4-202ENST00000392481 ZKSCAN2Q63HK3 967 aa14.83□□□□□ -0.04
RFC4-202ENST00000392481 DNAJC5GQ8N7S2 189 aa14.83□□□□□ -0.04
RFC4-202ENST00000392481 AGBL3Q8NEM8 1001 aa14.83□□□□□ -0.04
RFC4-202ENST00000392481 ZC3H15Q8WU90 426 aaKnown RBP14.83□□□□□ -0.04
RFC4-202ENST00000392481 SHTN1A0MZ66 631 aa14.82□□□□□ -0.04
RFC4-202ENST00000392481 PLIN1O60240 522 aa14.82□□□□□ -0.04
RFC4-202ENST00000392481 GNAI3P08754 354 aa14.82□□□□□ -0.04
RFC4-202ENST00000392481 UBE4AQ14139 1066 aa14.82□□□□□ -0.04
RFC4-202ENST00000392481 GMLQ99445 158 aa14.82□□□□□ -0.04
RFC4-202ENST00000392481 MEIS3Q99687 375 aa14.82□□□□□ -0.04
RFC4-202ENST00000392481 PGAP2Q9UHJ9 254 aa14.82□□□□□ -0.04
RFC4-202ENST00000392481 RFX5P48382 616 aaPredicted RBP14.81□□□□□ -0.04
RFC4-202ENST00000392481 HIRAP54198 1017 aaPredicted RBP14.81□□□□□ -0.04
RFC4-202ENST00000392481 HTRA3P83110 453 aa14.81□□□□□ -0.04
RFC4-202ENST00000392481 STRIP1Q5VSL9 837 aa14.81□□□□□ -0.04
RFC4-202ENST00000392481 TRPM4Q8TD43 1214 aa14.81□□□□□ -0.04
RFC4-202ENST00000392481 CLUAP1Q96AJ1 413 aa14.81□□□□□ -0.04
RFC4-202ENST00000392481 CD209Q9NNX6 404 aa14.81□□□□□ -0.04
RFC4-202ENST00000392481 TNNQ9UQP3 1299 aa14.81□□□□□ -0.04
RFC4-202ENST00000392481 LRRFIP2Q9Y608 721 aaKnown RBP14.81□□□□□ -0.04
RFC4-202ENST00000392481 ZNF280AP59817 542 aaPredicted RBP14.8□□□□□ -0.04
RFC4-202ENST00000392481 LRRC24Q50LG9 513 aa14.8□□□□□ -0.04
RFC4-202ENST00000392481 DACT2Q5SW24 774 aa14.8□□□□□ -0.04
RFC4-202ENST00000392481 SAMD7Q7Z3H4 446 aa14.8□□□□□ -0.04
RFC4-202ENST00000392481 ZNF804AQ7Z570 1209 aa14.8□□□□□ -0.04
RFC4-202ENST00000392481 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
RFC4-202ENST00000392481 CREBZFQ9NS37 354 aa14.8□□□□□ -0.04
RFC4-202ENST00000392481 MYO3BQ8WXR4 1341 aa14.79□□□□□ -0.04
RFC4-202ENST00000392481 USP17L8P0C7I0 530 aa14.79□□□□□ -0.04
RFC4-202ENST00000392481 PTPN12Q05209 780 aaKnown RBP14.79□□□□□ -0.04
RFC4-202ENST00000392481 TBC1D10BQ4KMP7 808 aaPredicted RBP14.79□□□□□ -0.04
RFC4-202ENST00000392481 METTL24Q5JXM2 366 aa14.79□□□□□ -0.04
RFC4-202ENST00000392481 TTLL5Q6EMB2 1281 aa14.79□□□□□ -0.04
RFC4-202ENST00000392481 EYA2O00167 538 aa14.78□□□□□ -0.04
RFC4-202ENST00000392481 EGFRP00533 1210 aa14.78□□□□□ -0.04
RFC4-202ENST00000392481 IL1R1P14778 569 aa14.78□□□□□ -0.04
RFC4-202ENST00000392481 VGLL2Q8N8G2 317 aa14.78□□□□□ -0.04
RFC4-202ENST00000392481 FBXW7Q969H0 707 aa14.78□□□□□ -0.04
RFC4-202ENST00000392481 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
RFC4-202ENST00000392481 TMEM88BA6NKF7 163 aa14.77□□□□□ -0.04
RFC4-202ENST00000392481 PDE8BO95263 885 aa14.77□□□□□ -0.04
RFC4-202ENST00000392481 MMP14P50281 582 aa14.77□□□□□ -0.04
RFC4-202ENST00000392481 GTF2IP78347 998 aa14.77□□□□□ -0.04
RFC4-202ENST00000392481 KIF4BQ2VIQ3 1234 aa14.77□□□□□ -0.04
RFC4-202ENST00000392481 RBM26Q5T8P6 1007 aaKnown RBP14.77□□□□□ -0.04
RFC4-202ENST00000392481 FTSJ3Q8IY81 847 aaKnown RBP14.77□□□□□ -0.04
RFC4-202ENST00000392481 DZIP1LQ8IYY4 767 aaKnown RBP14.77□□□□□ -0.04
RFC4-202ENST00000392481 TMEM57Q8N5G2 664 aa14.77□□□□□ -0.04
RFC4-202ENST00000392481 KLRG1Q96E93 195 aa14.77□□□□□ -0.04
RFC4-202ENST00000392481 ZNF646O15015 1829 aaPredicted RBP14.77□□□□□ -0.04
RFC4-202ENST00000392481 PCNTO95613 3336 aa14.76□□□□□ -0.05
RFC4-202ENST00000392481 CIAO1O76071 339 aa14.76□□□□□ -0.05
RFC4-202ENST00000392481 GNAI2P04899 355 aa14.76□□□□□ -0.05
RFC4-202ENST00000392481 HIBADHP31937 336 aaKnown RBP14.76□□□□□ -0.05
RFC4-202ENST00000392481 MTX1Q13505 466 aa14.76□□□□□ -0.05
RFC4-202ENST00000392481 OGFOD1Q8N543 542 aa14.76□□□□□ -0.05
RFC4-202ENST00000392481 FAM84BQ96KN1 310 aaPredicted RBP14.76□□□□□ -0.05
RFC4-202ENST00000392481 MXD3Q9BW11 206 aa14.76□□□□□ -0.05
RFC4-202ENST00000392481 TRAF5O00463 557 aa14.75□□□□□ -0.05
RFC4-202ENST00000392481 GYG1P46976 350 aa14.75□□□□□ -0.05
RFC4-202ENST00000392481 CDC37L1Q7L3B6 337 aa14.75□□□□□ -0.05
RFC4-202ENST00000392481 ATG9AQ7Z3C6 839 aa14.75□□□□□ -0.05
RFC4-202ENST00000392481 MYOZ2Q9NPC6 264 aa14.75□□□□□ -0.05
RFC4-202ENST00000392481 COPRSQ9NQ92 184 aa14.75□□□□□ -0.05
RFC4-202ENST00000392481 POLR2AP24928 1970 aaKnown RBP14.75□□□□□ -0.05
RFC4-202ENST00000392481 SASH1O94885 1247 aa14.75□□□□□ -0.05
RFC4-202ENST00000392481 RLBP1P12271 317 aa14.75□□□□□ -0.05
RFC4-202ENST00000392481 FKBP1AP62942 108 aaKnown RBP14.75□□□□□ -0.05
RFC4-202ENST00000392481 PUM3Q15397 648 aaKnown RBP14.75□□□□□ -0.05
RFC4-202ENST00000392481 FBXO33Q7Z6M2 555 aa14.75□□□□□ -0.05
RFC4-202ENST00000392481 TDRD7Q8NHU6 1098 aaKnown RBP14.75□□□□□ -0.05
RFC4-202ENST00000392481 GLIS2Q9BZE0 524 aaPredicted RBP14.75□□□□□ -0.05
RFC4-202ENST00000392481 SIL1Q9H173 461 aa14.75□□□□□ -0.05
RFC4-202ENST00000392481 TRPM7Q96QT4 1865 aa14.74□□□□□ -0.05
RFC4-202ENST00000392481 FAM205AQ6ZU69 1335 aa14.74□□□□□ -0.05
RFC4-202ENST00000392481 SRGAP3O43295 1099 aa14.74□□□□□ -0.05
RFC4-202ENST00000392481 FGFR2P21802 821 aa14.74□□□□□ -0.05
RFC4-202ENST00000392481 IL15P40933 162 aaPredicted RBP14.74□□□□□ -0.05
RFC4-202ENST00000392481 FMR1Q06787 632 aaKnown RBP eCLIP14.74□□□□□ -0.05
RFC4-202ENST00000392481 CAVIN4Q5BKX8 364 aa14.74□□□□□ -0.05
RFC4-202ENST00000392481 KRT26Q7Z3Y9 468 aa14.74□□□□□ -0.05
RFC4-202ENST00000392481 VPS37DQ86XT2 251 aa14.74□□□□□ -0.05
RFC4-202ENST00000392481 DCPSQ96C86 337 aaKnown RBP14.74□□□□□ -0.05
RFC4-202ENST00000392481 CEP126Q9P2H0 1117 aa14.74□□□□□ -0.05
RFC4-202ENST00000392481 HDAC9Q9UKV0 1011 aa14.74□□□□□ -0.05
RFC4-202ENST00000392481 IFIT1P09914 478 aaKnown RBP14.73□□□□□ -0.05
RFC4-202ENST00000392481 SCARF1Q14162 830 aa14.73□□□□□ -0.05
RFC4-202ENST00000392481 CST9Q5W186 159 aa14.73□□□□□ -0.05
RFC4-202ENST00000392481 USP48Q86UV5 1035 aa14.73□□□□□ -0.05
RFC4-202ENST00000392481 KIAA0825Q8IV33 1275 aa14.73□□□□□ -0.05
RFC4-202ENST00000392481 ITPRIPQ8IWB1 547 aa14.73□□□□□ -0.05
RFC4-202ENST00000392481 CERS5Q8N5B7 392 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms