RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 ATF3P18847 181 aa24.59■■□□□ 1.53
COL23A1-201ENST00000390654 SDF4Q9BRK5 362 aa24.59■■□□□ 1.53
COL23A1-201ENST00000390654 CCDC112Q8NEF3 446 aa24.59■■□□□ 1.53
COL23A1-201ENST00000390654 E7EWF7 191 aa24.58■■□□□ 1.53
COL23A1-201ENST00000390654 PFKFB2O60825 505 aa24.58■■□□□ 1.53
COL23A1-201ENST00000390654 SKILP12757 684 aa24.58■■□□□ 1.53
COL23A1-201ENST00000390654 LRRC8AQ8IWT6 810 aa24.58■■□□□ 1.53
COL23A1-201ENST00000390654 KDM6AO15550 1401 aaPredicted RBP24.58■■□□□ 1.53
COL23A1-201ENST00000390654 SNW1Q13573 536 aaKnown RBP24.58■■□□□ 1.53
COL23A1-201ENST00000390654 PDIA4P13667 645 aaKnown RBP24.58■■□□□ 1.52
COL23A1-201ENST00000390654 HSPD1P10809 573 aaKnown RBP24.57■■□□□ 1.52
COL23A1-201ENST00000390654 SMARCC2Q8TAQ2 1214 aa24.57■■□□□ 1.52
COL23A1-201ENST00000390654 PUS3Q9BZE2 481 aaKnown RBP24.57■■□□□ 1.52
COL23A1-201ENST00000390654 STX1AQ16623 288 aa24.57■■□□□ 1.52
COL23A1-201ENST00000390654 CEP135Q66GS9 1140 aa24.56■■□□□ 1.52
COL23A1-201ENST00000390654 ANKRD7Q92527 254 aa24.56■■□□□ 1.52
COL23A1-201ENST00000390654 CCDC69A6NI79 296 aa24.56■■□□□ 1.52
COL23A1-201ENST00000390654 CTIFO43310 598 aaKnown RBP24.56■■□□□ 1.52
COL23A1-201ENST00000390654 LRP10Q7Z4F1 713 aa24.56■■□□□ 1.52
COL23A1-201ENST00000390654 ILDR1Q86SU0 546 aaPredicted RBP24.56■■□□□ 1.52
COL23A1-201ENST00000390654 LMO7Q8WWI1 1683 aa24.56■■□□□ 1.52
COL23A1-201ENST00000390654 SF3A1Q15459 793 aaKnown RBP24.55■■□□□ 1.52
COL23A1-201ENST00000390654 RCOR1Q9UKL0 485 aa24.55■■□□□ 1.52
COL23A1-201ENST00000390654 JCADQ9P266 1359 aa24.55■■□□□ 1.52
COL23A1-201ENST00000390654 PDIA3P30101 505 aaKnown RBP24.55■■□□□ 1.52
COL23A1-201ENST00000390654 WASHC4Q2M389 1173 aa24.55■■□□□ 1.52
COL23A1-201ENST00000390654 NCAPD2Q15021 1401 aa24.55■■□□□ 1.52
COL23A1-201ENST00000390654 IFIT1P09914 478 aaKnown RBP24.55■■□□□ 1.52
COL23A1-201ENST00000390654 DHX40Q8IX18 779 aaKnown RBP24.54■■□□□ 1.52
COL23A1-201ENST00000390654 PCDHA7Q9UN72 937 aa24.54■■□□□ 1.52
COL23A1-201ENST00000390654 MEGF6O75095 1541 aa24.54■■□□□ 1.52
COL23A1-201ENST00000390654 SMTNL1A8MU46 457 aa24.54■■□□□ 1.52
COL23A1-201ENST00000390654 M0R2C6 588 aa24.53■■□□□ 1.52
COL23A1-201ENST00000390654 ATG9AQ7Z3C6 839 aa24.53■■□□□ 1.52
COL23A1-201ENST00000390654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.53■■□□□ 1.52
COL23A1-201ENST00000390654 CLIC4Q9Y696 253 aa24.53■■□□□ 1.52
COL23A1-201ENST00000390654 MAST3O60307 1309 aa24.53■■□□□ 1.52
COL23A1-201ENST00000390654 PTPN21Q16825 1174 aa24.53■■□□□ 1.52
COL23A1-201ENST00000390654 NDUFA8P51970 172 aa24.53■■□□□ 1.52
COL23A1-201ENST00000390654 RABL6Q3YEC7 729 aaPredicted RBP24.53■■□□□ 1.52
COL23A1-201ENST00000390654 C19orf44Q9H6X5 657 aa24.53■■□□□ 1.52
COL23A1-201ENST00000390654 RGPD5Q99666 1765 aa24.52■■□□□ 1.52
COL23A1-201ENST00000390654 FDPSP14324 419 aaKnown RBP24.52■■□□□ 1.52
COL23A1-201ENST00000390654 FAM160A1Q05DH4 1040 aa24.52■■□□□ 1.52
COL23A1-201ENST00000390654 DMTNQ08495 405 aa24.52■■□□□ 1.52
COL23A1-201ENST00000390654 NBPF26B4DH59 902 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 SMC2O95347 1197 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 PTPN14Q15678 1187 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 NBPF14Q5TI25 921 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 NBPF10Q6P3W6 841 aaKnown RBP24.51■■□□□ 1.51
COL23A1-201ENST00000390654 PI16Q6UXB8 463 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 NBPF15Q8N660 670 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 OSBP2Q969R2 916 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 A0A1B0GUL7 405 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 FOXO4P98177 505 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 EXOSC10Q01780 885 aaKnown RBP24.51■■□□□ 1.51
COL23A1-201ENST00000390654 DPCR1Q3MIW9 517 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 GORABQ5T7V8 394 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 ZNF396Q96N95 335 aaPredicted RBP24.51■■□□□ 1.51
COL23A1-201ENST00000390654 STRN4Q9NRL3 753 aa24.51■■□□□ 1.51
COL23A1-201ENST00000390654 STK38Q15208 465 aa24.5■■□□□ 1.51
COL23A1-201ENST00000390654 NAA16Q6N069 864 aaPredicted RBP24.5■■□□□ 1.51
COL23A1-201ENST00000390654 ZNF215Q9UL58 517 aaPredicted RBP24.5■■□□□ 1.51
COL23A1-201ENST00000390654 RXRAP19793 462 aa24.5■■□□□ 1.51
COL23A1-201ENST00000390654 TOM1L2Q6ZVM7 507 aa24.5■■□□□ 1.51
COL23A1-201ENST00000390654 ENGASEQ8NFI3 743 aa24.5■■□□□ 1.51
COL23A1-201ENST00000390654 ANO10Q9NW15 660 aa24.5■■□□□ 1.51
COL23A1-201ENST00000390654 CHD2O14647 1828 aaKnown RBP24.5■■□□□ 1.51
COL23A1-201ENST00000390654 ZRSR1Q15695 479 aaKnown RBP24.5■■□□□ 1.51
COL23A1-201ENST00000390654 CEP57L1Q8IYX8 460 aa24.5■■□□□ 1.51
COL23A1-201ENST00000390654 HMGB1P09429 215 aaKnown RBP24.49■■□□□ 1.51
COL23A1-201ENST00000390654 DCAF5Q96JK2 942 aa24.49■■□□□ 1.51
COL23A1-201ENST00000390654 LLPHQ9BRT6 129 aaKnown RBP24.49■■□□□ 1.51
COL23A1-201ENST00000390654 ADORA1P30542 326 aa24.49■■□□□ 1.51
COL23A1-201ENST00000390654 CASP7P55210 303 aa24.49■■□□□ 1.51
COL23A1-201ENST00000390654 DENND2AQ9ULE3 1009 aa24.49■■□□□ 1.51
COL23A1-201ENST00000390654 CARMIL3Q8ND23 1372 aa24.49■■□□□ 1.51
COL23A1-201ENST00000390654 KAT6BQ8WYB5 2073 aa24.49■■□□□ 1.51
COL23A1-201ENST00000390654 ZMYM1Q5SVZ6 1142 aa24.48■■□□□ 1.51
COL23A1-201ENST00000390654 MARCKSP29966 332 aaPredicted RBP24.48■■□□□ 1.51
COL23A1-201ENST00000390654 MRPS27Q92552 414 aaKnown RBP24.48■■□□□ 1.51
COL23A1-201ENST00000390654 SH3TC1Q8TE82 1336 aa24.48■■□□□ 1.51
COL23A1-201ENST00000390654 PLBD2Q8NHP8 589 aa24.48■■□□□ 1.51
COL23A1-201ENST00000390654 AIFM3Q96NN9 605 aa24.47■■□□□ 1.51
COL23A1-201ENST00000390654 KLF18A0A0U1RQI7 1052 aa24.47■■□□□ 1.51
COL23A1-201ENST00000390654 RNF113AO15541 343 aaKnown RBP24.47■■□□□ 1.51
COL23A1-201ENST00000390654 CCZ1BP86790 482 aa24.47■■□□□ 1.51
COL23A1-201ENST00000390654 CCZ1P86791 482 aaPredicted RBP24.47■■□□□ 1.51
COL23A1-201ENST00000390654 MRFAP1L1Q96HT8 127 aa24.47■■□□□ 1.51
COL23A1-201ENST00000390654 C1orf167Q5SNV9 1468 aa24.47■■□□□ 1.51
COL23A1-201ENST00000390654 A0A0G2JS52 829 aa24.46■■□□□ 1.51
COL23A1-201ENST00000390654 CTAGE5O15320 804 aa24.46■■□□□ 1.51
COL23A1-201ENST00000390654 C8orf76Q96K31 380 aa24.46■■□□□ 1.51
COL23A1-201ENST00000390654 HELLSQ9NRZ9 838 aa24.46■■□□□ 1.51
COL23A1-201ENST00000390654 IFNKQ9P0W0 207 aa24.46■■□□□ 1.51
COL23A1-201ENST00000390654 GOLGA8BA8MQT2 603 aa24.46■■□□□ 1.51
COL23A1-201ENST00000390654 TMC6Q7Z403 805 aa24.46■■□□□ 1.51
COL23A1-201ENST00000390654 DSCC1Q9BVC3 393 aa24.46■■□□□ 1.51
COL23A1-201ENST00000390654 PAXBP1Q9Y5B6 917 aa24.46■■□□□ 1.51
COL23A1-201ENST00000390654 SCARF1Q14162 830 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms