RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SPDYE2BA6NHP3 402 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 MYO1CO00159 1063 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 CTAGE5O15320 804 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 HTATSF1O43719 755 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 DHX16O60231 1041 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 MAP4K4O95819 1239 aaPredicted RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 TUBB4AP04350 444 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 SPDYE6P0CI01 402 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 PDCP20941 246 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 OAS2P29728 719 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 CEBPAP49715 358 aaPredicted RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 MMP14P50281 582 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 GSDMDP57764 484 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 PLCB2Q00722 1185 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 PSME1Q06323 249 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 TBX2Q13207 712 aaPredicted RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 SPDYE2Q495Y8 402 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 ARHGAP29Q52LW3 1261 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 HSP90AB2PQ58FF8 381 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 BEND3Q5T5X7 828 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 LARP1BQ659C4 914 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 NAA16Q6N069 864 aaPredicted RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 PRPF40BQ6NWY9 871 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 GGT6Q6P531 493 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 SLC4A10Q6U841 1118 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 CWC27Q6UX04 472 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 STOX1Q6ZVD7 989 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 SRLQ86TD4 932 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 ZNF589Q86UQ0 364 aaPredicted RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 FCHSD1Q86WN1 690 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 FMR1NBQ8N0W7 255 aaPredicted RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 CNTROBQ8N137 903 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 TXLNBQ8N3L3 684 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 CCDC150Q8NCX0 1101 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 NSUN7Q8NE18 718 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 IL17REQ8NFR9 667 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 FBXO18Q8NFZ0 1043 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 DDX54Q8TDD1 881 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 EXOC4Q96A65 974 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 NUDT16Q96DE0 195 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 KAZALD1Q96I82 304 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 COG3Q96JB2 828 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 FAM227BQ96M60 508 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 USP28Q96RU2 1077 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 FTOQ9C0B1 505 aaKnown RBP eCLIP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 BABAM1Q9NWV8 329 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 TRMT1Q9NXH9 659 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 STAG3Q9UJ98 1225 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 CYP46A1Q9Y6A2 500 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 ATAD5Q96QE3 1844 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.04□□□□□ -1.76
TRAV39-201ENST00000390466 TMEM94Q12767 1356 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 FAM237AA0A1B0GTK4 181 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 A0A1W2PQ27 194 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 A0A1W2PQ64 194 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 A0A1W2PQD8 194 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 EFCAB8A8MWE9 144 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 TAF5LO75529 589 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 SURF6O75683 361 aaKnown RBP4.03□□□□□ -1.76
TRAV39-201ENST00000390466 ALDH1L1O75891 902 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 SASH1O94885 1247 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 NBPF7P0C2Y1 421 aaPredicted RBP4.03□□□□□ -1.76
TRAV39-201ENST00000390466 UBTFL1P0CB47 393 aaPredicted RBP4.03□□□□□ -1.76
TRAV39-201ENST00000390466 FECHP22830 423 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 CASQ1P31415 396 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 USP5P45974 858 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 PSEN1P49768 467 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 MAP3K9P80192 1104 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 FAM160A1Q05DH4 1040 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 LRRFIP1Q32MZ4 808 aaKnown RBP4.03□□□□□ -1.76
TRAV39-201ENST00000390466 DPCR1Q3MIW9 517 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 TAF7LQ5H9L4 462 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 CCDC30Q5VVM6 783 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 FOXR1Q6PIV2 292 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 FILIP1Q7Z7B0 1213 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 TEX2Q8IWB9 1127 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 PLCD3Q8N3E9 789 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 AOPEPQ8N6M6 819 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 MSANTD4Q8NCY6 345 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 DPF2Q92785 391 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 TCEANC2Q96MN5 208 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 XPO4Q9C0E2 1151 aaKnown RBP4.03□□□□□ -1.76
TRAV39-201ENST00000390466 ZSCAN16Q9H4T2 348 aaPredicted RBP4.03□□□□□ -1.76
TRAV39-201ENST00000390466 ECHDC1Q9NTX5 307 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 ANO10Q9NW15 660 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 TSPYL4Q9UJ04 414 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 RAB21Q9UL25 225 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 MRFAP1Q9Y605 127 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 CCDC61Q9Y6R9 512 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 COL18A1P39060 1754 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 ANKRD36CQ5JPF3 1778 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 CASZ1Q86V15 1759 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 RREB1Q92766 1687 aa4.03□□□□□ -1.76
TRAV39-201ENST00000390466 KDM6AO15550 1401 aaPredicted RBP4.03□□□□□ -1.76
TRAV39-201ENST00000390466 LTBP4Q8N2S1 1624 aa4.03□□□□□ -1.77
TRAV39-201ENST00000390466 SHANK3Q9BYB0 1731 aa4.02□□□□□ -1.77
TRAV39-201ENST00000390466 NUTM2FA1L443 756 aa4.02□□□□□ -1.77
TRAV39-201ENST00000390466 PFKFB2O60825 505 aa4.02□□□□□ -1.77
TRAV39-201ENST00000390466 PRKAR2AP13861 404 aaKnown RBP4.02□□□□□ -1.77
TRAV39-201ENST00000390466 GUCY2CP25092 1073 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms