RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 PLEKHF1Q96S99 279 aa12.66□□□□□ -0.38
TRAV18-201ENST00000390446 GMLQ99445 158 aa12.66□□□□□ -0.38
TRAV18-201ENST00000390446 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
TRAV18-201ENST00000390446 BABAM1Q9NWV8 329 aa12.66□□□□□ -0.38
TRAV18-201ENST00000390446 LRRC37AA6NMS7 1700 aa12.65□□□□□ -0.38
TRAV18-201ENST00000390446 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
TRAV18-201ENST00000390446 NEUROD2Q15784 382 aa12.65□□□□□ -0.38
TRAV18-201ENST00000390446 SLC17A8Q8NDX2 589 aa12.65□□□□□ -0.38
TRAV18-201ENST00000390446 MXD3Q9BW11 206 aa12.65□□□□□ -0.38
TRAV18-201ENST00000390446 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.38
TRAV18-201ENST00000390446 MYO3BQ8WXR4 1341 aa12.64□□□□□ -0.39
TRAV18-201ENST00000390446 SP3Q02447 781 aa12.64□□□□□ -0.39
TRAV18-201ENST00000390446 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
TRAV18-201ENST00000390446 SLC9C1Q4G0N8 1177 aa12.64□□□□□ -0.39
TRAV18-201ENST00000390446 ZBTB38Q8NAP3 1195 aaPredicted RBP12.64□□□□□ -0.39
TRAV18-201ENST00000390446 FZD1Q9UP38 647 aa12.64□□□□□ -0.39
TRAV18-201ENST00000390446 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
TRAV18-201ENST00000390446 PDE8AO60658 829 aa12.63□□□□□ -0.39
TRAV18-201ENST00000390446 ZBTB48P10074 688 aaPredicted RBP12.63□□□□□ -0.39
TRAV18-201ENST00000390446 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
TRAV18-201ENST00000390446 LDLRAD1Q5T700 205 aa12.63□□□□□ -0.39
TRAV18-201ENST00000390446 KIAA0825Q8IV33 1275 aa12.63□□□□□ -0.39
TRAV18-201ENST00000390446 DPF3Q92784 378 aa12.63□□□□□ -0.39
TRAV18-201ENST00000390446 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
TRAV18-201ENST00000390446 HYPKQ9NX55 129 aa12.63□□□□□ -0.39
TRAV18-201ENST00000390446 H0YGN5 161 aa12.62□□□□□ -0.39
TRAV18-201ENST00000390446 IGF2BP3O00425 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRAV18-201ENST00000390446 CRHR2Q13324 411 aa12.62□□□□□ -0.39
TRAV18-201ENST00000390446 DLGAP5Q15398 846 aa12.62□□□□□ -0.39
TRAV18-201ENST00000390446 STRIP1Q5VSL9 837 aa12.62□□□□□ -0.39
TRAV18-201ENST00000390446 TTLL5Q6EMB2 1281 aa12.62□□□□□ -0.39
TRAV18-201ENST00000390446 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
TRAV18-201ENST00000390446 ARMC5Q96C12 935 aa12.62□□□□□ -0.39
TRAV18-201ENST00000390446 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
TRAV18-201ENST00000390446 CDC5LQ99459 802 aaKnown RBP12.62□□□□□ -0.39
TRAV18-201ENST00000390446 MYD88Q99836 296 aa12.62□□□□□ -0.39
TRAV18-201ENST00000390446 SCN9AQ15858 1988 aa12.61□□□□□ -0.39
TRAV18-201ENST00000390446 MYO1BO43795 1136 aa12.61□□□□□ -0.39
TRAV18-201ENST00000390446 WDHD1O75717 1129 aaPredicted RBP12.61□□□□□ -0.39
TRAV18-201ENST00000390446 IREB2P48200 963 aaKnown RBP12.61□□□□□ -0.39
TRAV18-201ENST00000390446 MMP14P50281 582 aa12.61□□□□□ -0.39
TRAV18-201ENST00000390446 SUPT20HL1Q3ZLR7 823 aa12.61□□□□□ -0.39
TRAV18-201ENST00000390446 DACT2Q5SW24 774 aa12.61□□□□□ -0.39
TRAV18-201ENST00000390446 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
TRAV18-201ENST00000390446 COA1Q9GZY4 146 aa12.61□□□□□ -0.39
TRAV18-201ENST00000390446 DEFB129Q9H1M3 183 aa12.61□□□□□ -0.39
TRAV18-201ENST00000390446 ZNF609O15014 1411 aa12.61□□□□□ -0.39
TRAV18-201ENST00000390446 KCNJ4P48050 445 aa12.6□□□□□ -0.39
TRAV18-201ENST00000390446 TRIM28Q13263 835 aaKnown RBP12.6□□□□□ -0.39
TRAV18-201ENST00000390446 KIF22Q14807 665 aa12.6□□□□□ -0.39
TRAV18-201ENST00000390446 PCCAP05165 728 aaPredicted RBP12.59□□□□□ -0.39
TRAV18-201ENST00000390446 CCT4P50991 539 aaKnown RBP12.59□□□□□ -0.39
TRAV18-201ENST00000390446 RBM5P52756 815 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAV18-201ENST00000390446 GTF2IP78347 998 aa12.59□□□□□ -0.39
TRAV18-201ENST00000390446 VEZTQ9HBM0 779 aa12.59□□□□□ -0.39
TRAV18-201ENST00000390446 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
TRAV18-201ENST00000390446 CWC25Q9NXE8 425 aaPredicted RBP12.59□□□□□ -0.39
TRAV18-201ENST00000390446 MED23Q9ULK4 1368 aa12.58□□□□□ -0.4
TRAV18-201ENST00000390446 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
TRAV18-201ENST00000390446 F8W031 263 aaPredicted RBP12.58□□□□□ -0.4
TRAV18-201ENST00000390446 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
TRAV18-201ENST00000390446 TAF1CQ15572 869 aaPredicted RBP12.58□□□□□ -0.4
TRAV18-201ENST00000390446 CCDC191Q8NCU4 936 aa12.58□□□□□ -0.4
TRAV18-201ENST00000390446 ZNF333Q96JL9 665 aa12.58□□□□□ -0.4
TRAV18-201ENST00000390446 MINPP1Q9UNW1 487 aa12.58□□□□□ -0.4
TRAV18-201ENST00000390446 PTCH2Q9Y6C5 1203 aa12.58□□□□□ -0.4
TRAV18-201ENST00000390446 COL4A1P02462 1669 aa12.57□□□□□ -0.4
TRAV18-201ENST00000390446 CLRN2A0PK11 232 aa12.57□□□□□ -0.4
TRAV18-201ENST00000390446 CHL1O00533 1208 aa12.57□□□□□ -0.4
TRAV18-201ENST00000390446 HOXB7P09629 217 aa12.57□□□□□ -0.4
TRAV18-201ENST00000390446 IGHMBP2P38935 993 aaKnown RBP12.57□□□□□ -0.4
TRAV18-201ENST00000390446 DUSP27Q5VZP5 1158 aa12.57□□□□□ -0.4
TRAV18-201ENST00000390446 ANKRD13AQ8IZ07 590 aa12.57□□□□□ -0.4
TRAV18-201ENST00000390446 ELP3Q9H9T3 547 aa12.57□□□□□ -0.4
TRAV18-201ENST00000390446 BSDC1Q9NW68 430 aaPredicted RBP12.57□□□□□ -0.4
TRAV18-201ENST00000390446 PPP2R3BQ9Y5P8 575 aa12.57□□□□□ -0.4
TRAV18-201ENST00000390446 UNCXA6NJT0 531 aa12.56□□□□□ -0.4
TRAV18-201ENST00000390446 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
TRAV18-201ENST00000390446 DDX58O95786 925 aaKnown RBP12.56□□□□□ -0.4
TRAV18-201ENST00000390446 MAP3K11Q16584 847 aa12.56□□□□□ -0.4
TRAV18-201ENST00000390446 SH3TC2Q8TF17 1288 aa12.56□□□□□ -0.4
TRAV18-201ENST00000390446 PHAXQ9H814 394 aaKnown RBP12.56□□□□□ -0.4
TRAV18-201ENST00000390446 LEMD3Q9Y2U8 911 aa12.56□□□□□ -0.4
TRAV18-201ENST00000390446 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
TRAV18-201ENST00000390446 CTSWP56202 376 aa12.55□□□□□ -0.4
TRAV18-201ENST00000390446 NBPF12Q5TAG4 269 aaPredicted RBP12.55□□□□□ -0.4
TRAV18-201ENST00000390446 CCDC146Q8IYE0 955 aa12.55□□□□□ -0.4
TRAV18-201ENST00000390446 OPTNQ96CV9 577 aa12.55□□□□□ -0.4
TRAV18-201ENST00000390446 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
TRAV18-201ENST00000390446 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
TRAV18-201ENST00000390446 ANKRD2Q9GZV1 360 aa12.55□□□□□ -0.4
TRAV18-201ENST00000390446 RBM27Q9P2N5 1060 aaKnown RBP12.55□□□□□ -0.4
TRAV18-201ENST00000390446 ZNF804BA4D1E1 1349 aa12.55□□□□□ -0.4
TRAV18-201ENST00000390446 CCL15-CCL14A0A0B4J2E2 113 aa12.54□□□□□ -0.4
TRAV18-201ENST00000390446 CCL15Q16663 113 aa12.54□□□□□ -0.4
TRAV18-201ENST00000390446 TXNRD3Q86VQ6 643 aa12.54□□□□□ -0.4
TRAV18-201ENST00000390446 PTPN18Q99952 460 aa12.54□□□□□ -0.4
TRAV18-201ENST00000390446 HTATIP2Q9BUP3 242 aa12.54□□□□□ -0.4
TRAV18-201ENST00000390446 BIN2Q9UBW5 565 aaPredicted RBP12.54□□□□□ -0.4
TRAV18-201ENST00000390446 NR2E3Q9Y5X4 410 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms