RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 BRINP3Q76B58 766 aa13.77□□□□□ -0.2
RAPGEF3-201ENST00000389212 BICD2Q8TD16 824 aa13.77□□□□□ -0.2
RAPGEF3-201ENST00000389212 LEO1Q8WVC0 666 aaPredicted RBP13.77□□□□□ -0.2
RAPGEF3-201ENST00000389212 NUP62CLQ9H1M0 184 aa13.77□□□□□ -0.2
RAPGEF3-201ENST00000389212 JCADQ9P266 1359 aa13.77□□□□□ -0.2
RAPGEF3-201ENST00000389212 KAT6BQ8WYB5 2073 aa13.77□□□□□ -0.2
RAPGEF3-201ENST00000389212 KRT32Q14532 448 aa13.77□□□□□ -0.21
RAPGEF3-201ENST00000389212 PI16Q6UXB8 463 aa13.77□□□□□ -0.21
RAPGEF3-201ENST00000389212 LUZP1Q86V48 1076 aa13.77□□□□□ -0.21
RAPGEF3-201ENST00000389212 FAM89AQ96GI7 184 aa13.77□□□□□ -0.21
RAPGEF3-201ENST00000389212 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.21
RAPGEF3-201ENST00000389212 TSGA10IPQ3SY00 556 aa13.77□□□□□ -0.21
RAPGEF3-201ENST00000389212 PGBD1Q96JS3 809 aa13.77□□□□□ -0.21
RAPGEF3-201ENST00000389212 NR1I2O75469 434 aa13.76□□□□□ -0.21
RAPGEF3-201ENST00000389212 UVSSAQ2YD98 709 aa13.76□□□□□ -0.21
RAPGEF3-201ENST00000389212 A0A087WWV3 80 aa13.76□□□□□ -0.21
RAPGEF3-201ENST00000389212 M0R2C6 588 aa13.76□□□□□ -0.21
RAPGEF3-201ENST00000389212 EYA2O00167 538 aa13.76□□□□□ -0.21
RAPGEF3-201ENST00000389212 KIAA2012Q0VF49 1180 aa13.76□□□□□ -0.21
RAPGEF3-201ENST00000389212 TNMDQ9H2S6 317 aa13.76□□□□□ -0.21
RAPGEF3-201ENST00000389212 PCDH11XQ9BZA7 1347 aa13.76□□□□□ -0.21
RAPGEF3-201ENST00000389212 PCDH11YQ9BZA8 1340 aa13.76□□□□□ -0.21
RAPGEF3-201ENST00000389212 CCDC192P0DO97 292 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 MAP3K11Q16584 847 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 KCNG1Q9UIX4 513 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 MAST3O60307 1309 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 WDR17Q8IZU2 1322 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 CCDC66A2RUB6 948 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 HSPD1P10809 573 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 GPTP24298 496 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 TYRO3Q06418 890 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 GORABQ5T7V8 394 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 IL15P40933 162 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 SCARF1Q14162 830 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 TIGD1Q96MW7 591 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 MRVI1Q9Y6F6 885 aa13.75□□□□□ -0.21
RAPGEF3-201ENST00000389212 RESTQ13127 1097 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 WASHC4Q2M389 1173 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 OSBP2Q969R2 916 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 ASAP1Q9ULH1 1129 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 E7EWF7 191 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 CTDNEP1O95476 244 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 EVA1CP58658 441 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 ANO6Q4KMQ2 910 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 DNAJC10Q8IXB1 793 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 KIF3AQ9Y496 699 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 GLI3P10071 1580 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 LMTK3Q96Q04 1460 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 PTPDC1A2A3K4 754 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 IL2RBP14784 551 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 ZMYM1Q5SVZ6 1142 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 OTUD7BQ6GQQ9 843 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 DHX32Q7L7V1 743 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 NSUN7Q8NE18 718 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 SCAND2PQ9GZW5 306 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 CEP126Q9P2H0 1117 aa13.74□□□□□ -0.21
RAPGEF3-201ENST00000389212 MCM5P33992 734 aa13.73□□□□□ -0.21
RAPGEF3-201ENST00000389212 FAM193AP78312 1265 aa13.73□□□□□ -0.21
RAPGEF3-201ENST00000389212 CCDC57Q2TAC2 916 aa13.73□□□□□ -0.21
RAPGEF3-201ENST00000389212 FBXW7Q969H0 707 aa13.73□□□□□ -0.21
RAPGEF3-201ENST00000389212 ALDH8A1Q9H2A2 487 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF3-201ENST00000389212 SH3TC1Q8TE82 1336 aa13.73□□□□□ -0.21
RAPGEF3-201ENST00000389212 CCDC191Q8NCU4 936 aa13.73□□□□□ -0.21
RAPGEF3-201ENST00000389212 ERCC4Q92889 916 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF3-201ENST00000389212 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
RAPGEF3-201ENST00000389212 TNNT1P13805 278 aa13.72□□□□□ -0.21
RAPGEF3-201ENST00000389212 TTC39AQ5SRH9 613 aa13.72□□□□□ -0.21
RAPGEF3-201ENST00000389212 EP400NLQ6ZTU2 488 aa13.72□□□□□ -0.21
RAPGEF3-201ENST00000389212 GPATCH11Q8N954 259 aa13.72□□□□□ -0.21
RAPGEF3-201ENST00000389212 XAGE2Q96GT9 111 aa13.72□□□□□ -0.21
RAPGEF3-201ENST00000389212 DNAJC25Q9H1X3 360 aa13.72□□□□□ -0.21
RAPGEF3-201ENST00000389212 PYCARDQ9ULZ3 195 aa13.72□□□□□ -0.21
RAPGEF3-201ENST00000389212 ELP1O95163 1332 aa13.71□□□□□ -0.21
RAPGEF3-201ENST00000389212 ERVV-2B6SEH9 535 aa13.71□□□□□ -0.21
RAPGEF3-201ENST00000389212 ZAP70P43403 619 aa13.71□□□□□ -0.21
RAPGEF3-201ENST00000389212 NOLC1Q14978 699 aaKnown RBP eCLIP13.71□□□□□ -0.21
RAPGEF3-201ENST00000389212 KCNF1Q9H3M0 494 aa13.71□□□□□ -0.21
RAPGEF3-201ENST00000389212 CBX8Q9HC52 389 aa13.71□□□□□ -0.21
RAPGEF3-201ENST00000389212 HELLSQ9NRZ9 838 aa13.71□□□□□ -0.21
RAPGEF3-201ENST00000389212 GJB4Q9NTQ9 266 aa13.71□□□□□ -0.21
RAPGEF3-201ENST00000389212 CPDO75976 1380 aa13.71□□□□□ -0.21
RAPGEF3-201ENST00000389212 PFKFB2O60825 505 aa13.71□□□□□ -0.22
RAPGEF3-201ENST00000389212 FAM200AQ8TCP9 573 aa13.71□□□□□ -0.22
RAPGEF3-201ENST00000389212 TMOD3Q9NYL9 352 aa13.71□□□□□ -0.22
RAPGEF3-201ENST00000389212 PKD1L3Q7Z443 1732 aa13.71□□□□□ -0.22
RAPGEF3-201ENST00000389212 LOC102724159A0A0B4J2E5 919 aa13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 A0A0G2JS52 829 aa13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 PWP2Q15269 919 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 HLFQ16534 295 aa13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 TOMM22Q9NS69 142 aa13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 DENND2AQ9ULE3 1009 aa13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 PALLDQ8WX93 1383 aa13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 TULP1O00294 542 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 USP28Q96RU2 1077 aa13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 DSCC1Q9BVC3 393 aa13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 EXOSC10Q01780 885 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 TCIRG1Q13488 830 aa13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 PUS7LQ9H0K6 701 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-201ENST00000389212 CLSTN2Q9H4D0 955 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms