RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 CDC5LQ99459 802 aaKnown RBP27.64■■■□□ 2.02
CNEP1R1-201ENST00000389134 PHAXQ9H814 394 aaKnown RBP27.64■■■□□ 2.02
CNEP1R1-201ENST00000389134 MYO3BQ8WXR4 1341 aa27.64■■■□□ 2.01
CNEP1R1-201ENST00000389134 MKI67P46013 3256 aaKnown RBP27.63■■■□□ 2.01
CNEP1R1-201ENST00000389134 MED23Q9ULK4 1368 aa27.63■■■□□ 2.01
CNEP1R1-201ENST00000389134 MKRN3Q13064 507 aaKnown RBP27.63■■■□□ 2.01
CNEP1R1-201ENST00000389134 DACT2Q5SW24 774 aa27.63■■■□□ 2.01
CNEP1R1-201ENST00000389134 ARMC9Q7Z3E5 817 aa27.63■■■□□ 2.01
CNEP1R1-201ENST00000389134 MBIPQ9NS73 344 aa27.63■■■□□ 2.01
CNEP1R1-201ENST00000389134 JARID2Q92833 1246 aaPredicted RBP27.62■■■□□ 2.01
CNEP1R1-201ENST00000389134 STRIP1Q5VSL9 837 aa27.61■■■□□ 2.01
CNEP1R1-201ENST00000389134 ALDH1A1P00352 501 aa27.6■■■□□ 2.01
CNEP1R1-201ENST00000389134 PTPN12Q05209 780 aaKnown RBP27.6■■■□□ 2.01
CNEP1R1-201ENST00000389134 METTL22Q9BUU2 404 aaPredicted RBP27.6■■■□□ 2.01
CNEP1R1-201ENST00000389134 BSDC1Q9NW68 430 aaPredicted RBP27.6■■■□□ 2.01
CNEP1R1-201ENST00000389134 MINPP1Q9UNW1 487 aa27.6■■■□□ 2.01
CNEP1R1-201ENST00000389134 HTTP42858 3142 aa27.59■■■□□ 2.01
CNEP1R1-201ENST00000389134 WDR43Q15061 677 aaKnown RBP eCLIP27.59■■■□□ 2.01
CNEP1R1-201ENST00000389134 APOBEC3FQ8IUX4 373 aaKnown RBP27.59■■■□□ 2.01
CNEP1R1-201ENST00000389134 MXD3Q9BW11 206 aa27.59■■■□□ 2.01
CNEP1R1-201ENST00000389134 COA1Q9GZY4 146 aa27.59■■■□□ 2.01
CNEP1R1-201ENST00000389134 CENPFP49454 3210 aa27.59■■■□□ 2.01
CNEP1R1-201ENST00000389134 DDX58O95786 925 aaKnown RBP27.58■■■□□ 2.01
CNEP1R1-201ENST00000389134 CTSWP56202 376 aa27.58■■■□□ 2.01
CNEP1R1-201ENST00000389134 FBXW7Q969H0 707 aa27.58■■■□□ 2.01
CNEP1R1-201ENST00000389134 WTIPA6NIX2 430 aaPredicted RBP27.57■■■□□ 2
CNEP1R1-201ENST00000389134 ZNF853P0CG23 659 aa27.57■■■□□ 2
CNEP1R1-201ENST00000389134 CCT4P50991 539 aaKnown RBP27.57■■■□□ 2
CNEP1R1-201ENST00000389134 SPRYD7Q5W111 196 aa27.57■■■□□ 2
CNEP1R1-201ENST00000389134 R3HDMLQ9H3Y0 253 aa27.57■■■□□ 2
CNEP1R1-201ENST00000389134 INHBEP58166 350 aa27.56■■■□□ 2
CNEP1R1-201ENST00000389134 LDLRAD1Q5T700 205 aa27.56■■■□□ 2
CNEP1R1-201ENST00000389134 CHMP4AQ9BY43 222 aa27.56■■■□□ 2
CNEP1R1-201ENST00000389134 MYBBP1AQ9BQG0 1328 aaKnown RBP27.56■■■□□ 2
CNEP1R1-201ENST00000389134 SASH1O94885 1247 aa27.55■■■□□ 2
CNEP1R1-201ENST00000389134 PRKG1Q13976 671 aa27.55■■■□□ 2
CNEP1R1-201ENST00000389134 TTLL11Q8NHH1 800 aa27.55■■■□□ 2
CNEP1R1-201ENST00000389134 ELL2O00472 640 aaPredicted RBP27.54■■■□□ 2
CNEP1R1-201ENST00000389134 LAMB1P07942 1786 aa27.54■■■□□ 2
CNEP1R1-201ENST00000389134 INTS3Q68E01 1043 aaKnown RBP27.54■■■□□ 2
CNEP1R1-201ENST00000389134 TTLL5Q6EMB2 1281 aa27.54■■■□□ 2
CNEP1R1-201ENST00000389134 IFT57Q9NWB7 429 aa27.54■■■□□ 2
CNEP1R1-201ENST00000389134 ANGEL1Q9UNK9 670 aaKnown RBP27.54■■■□□ 2
CNEP1R1-201ENST00000389134 ADAMTS8Q9UP79 889 aa27.54■■■□□ 2
CNEP1R1-201ENST00000389134 LEMD3Q9Y2U8 911 aa27.54■■■□□ 2
CNEP1R1-201ENST00000389134 ECM29Q5VYK3 1845 aa27.53■■■□□ 2
CNEP1R1-201ENST00000389134 MANSC4A6NHS7 340 aaPredicted RBP27.53■■■□□ 2
CNEP1R1-201ENST00000389134 GREM2Q9H772 168 aa27.53■■■□□ 2
CNEP1R1-201ENST00000389134 GNAI1P63096 354 aa27.52■■■□□ 2
CNEP1R1-201ENST00000389134 SLC10A4Q96EP9 437 aa27.52■■■□□ 2
CNEP1R1-201ENST00000389134 MAP3K2Q9Y2U5 619 aa27.52■■■□□ 2
CNEP1R1-201ENST00000389134 RBBP6Q7Z6E9 1792 aaKnown RBP27.52■■■□□ 2
CNEP1R1-201ENST00000389134 COL1A1P02452 1464 aaPredicted RBP27.51■■■□□ 2
CNEP1R1-201ENST00000389134 CALD1Q05682 793 aaKnown RBP27.51■■□□□ 1.99
CNEP1R1-201ENST00000389134 CCDC30Q5VVM6 783 aa27.51■■□□□ 1.99
CNEP1R1-201ENST00000389134 ZBED3Q96IU2 234 aaPredicted RBP27.51■■□□□ 1.99
CNEP1R1-201ENST00000389134 TRIM17Q9Y577 477 aa27.51■■□□□ 1.99
CNEP1R1-201ENST00000389134 TXNRD3Q86VQ6 643 aa27.5■■□□□ 1.99
CNEP1R1-201ENST00000389134 IFNL1Q8IU54 200 aa27.5■■□□□ 1.99
CNEP1R1-201ENST00000389134 KIAA0825Q8IV33 1275 aa27.5■■□□□ 1.99
CNEP1R1-201ENST00000389134 ZBTB48P10074 688 aaPredicted RBP27.49■■□□□ 1.99
CNEP1R1-201ENST00000389134 IGHMBP2P38935 993 aaKnown RBP27.49■■□□□ 1.99
CNEP1R1-201ENST00000389134 MAP3K11Q16584 847 aa27.49■■□□□ 1.99
CNEP1R1-201ENST00000389134 ZNF804BA4D1E1 1349 aa27.48■■□□□ 1.99
CNEP1R1-201ENST00000389134 IGKV5-2P06315 115 aa27.48■■□□□ 1.99
CNEP1R1-201ENST00000389134 HABP4Q5JVS0 413 aaKnown RBP27.48■■□□□ 1.99
CNEP1R1-201ENST00000389134 KSR2Q6VAB6 950 aa27.48■■□□□ 1.99
CNEP1R1-201ENST00000389134 OTOP1Q7RTM1 612 aa27.48■■□□□ 1.99
CNEP1R1-201ENST00000389134 ANKRD2Q9GZV1 360 aa27.48■■□□□ 1.99
CNEP1R1-201ENST00000389134 DEFB129Q9H1M3 183 aa27.48■■□□□ 1.99
CNEP1R1-201ENST00000389134 UNCXA6NJT0 531 aa27.47■■□□□ 1.99
CNEP1R1-201ENST00000389134 PPP1R12BO60237 982 aaPredicted RBP27.47■■□□□ 1.99
CNEP1R1-201ENST00000389134 NEXNQ0ZGT2 675 aa27.47■■□□□ 1.99
CNEP1R1-201ENST00000389134 GTF2IP78347 998 aa27.46■■□□□ 1.99
CNEP1R1-201ENST00000389134 C8orf58Q8NAV2 365 aa27.46■■□□□ 1.99
CNEP1R1-201ENST00000389134 PPP2R3BQ9Y5P8 575 aa27.46■■□□□ 1.99
CNEP1R1-201ENST00000389134 PI4KAP2A4QPH2 592 aa27.45■■□□□ 1.98
CNEP1R1-201ENST00000389134 DLGAP5Q15398 846 aa27.45■■□□□ 1.98
CNEP1R1-201ENST00000389134 PI4KAP1Q8N8J0 262 aa27.45■■□□□ 1.98
CNEP1R1-201ENST00000389134 ERO1AQ96HE7 468 aa27.45■■□□□ 1.98
CNEP1R1-201ENST00000389134 WNK4Q96J92 1243 aa27.45■■□□□ 1.98
CNEP1R1-201ENST00000389134 CEP290O15078 2479 aa27.45■■□□□ 1.98
CNEP1R1-201ENST00000389134 BRCA2P51587 3418 aa27.44■■□□□ 1.98
CNEP1R1-201ENST00000389134 POTEFA5A3E0 1075 aa27.44■■□□□ 1.98
CNEP1R1-201ENST00000389134 OTUD7BQ6GQQ9 843 aa27.44■■□□□ 1.98
CNEP1R1-201ENST00000389134 FZD1Q9UP38 647 aa27.44■■□□□ 1.98
CNEP1R1-201ENST00000389134 MTMR14Q8NCE2 650 aa27.43■■□□□ 1.98
CNEP1R1-201ENST00000389134 MPHOSPH8Q99549 860 aa27.43■■□□□ 1.98
CNEP1R1-201ENST00000389134 H7C1W4 665 aa27.42■■□□□ 1.98
CNEP1R1-201ENST00000389134 IGF2BP3O00425 579 aaKnown RBP eCLIP27.42■■□□□ 1.98
CNEP1R1-201ENST00000389134 KLRK1P26718 216 aa27.42■■□□□ 1.98
CNEP1R1-201ENST00000389134 SUPT20HL1Q3ZLR7 823 aa27.42■■□□□ 1.98
CNEP1R1-201ENST00000389134 PTPN22Q9Y2R2 807 aa27.42■■□□□ 1.98
CNEP1R1-201ENST00000389134 NEURL1BA8MQ27 555 aa27.41■■□□□ 1.98
CNEP1R1-201ENST00000389134 ITGA6P23229 1130 aa27.41■■□□□ 1.98
CNEP1R1-201ENST00000389134 KCNJ4P48050 445 aa27.41■■□□□ 1.98
CNEP1R1-201ENST00000389134 UBE3BQ7Z3V4 1068 aa27.41■■□□□ 1.98
CNEP1R1-201ENST00000389134 CLMNQ96JQ2 1002 aa27.41■■□□□ 1.98
CNEP1R1-201ENST00000389134 CD209Q9NNX6 404 aa27.41■■□□□ 1.98
CNEP1R1-201ENST00000389134 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms