RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 SNRPNP63162 240 aaKnown RBP5.79□□□□□ -1.48
RNU6-39P-201ENST00000384344 ENOX2Q16206 610 aaKnown RBP5.79□□□□□ -1.48
RNU6-39P-201ENST00000384344 EAPPQ56P03 285 aaPredicted RBP5.79□□□□□ -1.48
RNU6-39P-201ENST00000384344 TRAPPC3LQ5T215 181 aa5.79□□□□□ -1.48
RNU6-39P-201ENST00000384344 FAM117BQ6P1L5 589 aa5.79□□□□□ -1.48
RNU6-39P-201ENST00000384344 ALYREFQ86V81 257 aaKnown RBP5.79□□□□□ -1.48
RNU6-39P-201ENST00000384344 EHD4Q9H223 541 aa5.79□□□□□ -1.48
RNU6-39P-201ENST00000384344 DZANK1Q9NVP4 752 aa5.79□□□□□ -1.48
RNU6-39P-201ENST00000384344 TRAK1Q9UPV9 953 aa5.79□□□□□ -1.48
RNU6-39P-201ENST00000384344 CNTNAP5Q8WYK1 1306 aa5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 CDC27P30260 824 aa5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 MFAP1P55081 439 aaKnown RBP5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 TRIM28Q13263 835 aaKnown RBP5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 IL22RA1Q8N6P7 574 aa5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 TMEM102Q8N9M5 508 aaPredicted RBP5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 ZKSCAN3Q9BRR0 538 aa5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 LACRTQ9GZZ8 138 aa5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 SRA1Q9HD15 236 aaKnown RBP5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 NPHS2Q9NP85 383 aa5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 CCDC9Q9Y3X0 531 aaKnown RBP5.78□□□□□ -1.48
RNU6-39P-201ENST00000384344 LDHBP07195 334 aaKnown RBP5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 P4HBP07237 508 aaKnown RBP5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 USPL1Q5W0Q7 1092 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 MSL1Q68DK7 614 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 LINC00114Q6XXX2 140 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 C8orf86Q6ZUL3 223 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 MAP4K3Q8IVH8 894 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 DTWD1Q8N5C7 304 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 PLVAPQ9BX97 442 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 LIN7BQ9HAP6 207 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 TRIM33Q9UPN9 1127 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 SPG7Q9UQ90 795 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 PPME1Q9Y570 386 aa5.77□□□□□ -1.49
RNU6-39P-201ENST00000384344 A0A1W2PP55 124 aa5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 PRPF40AO75400 957 aaKnown RBP5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 NID1P14543 1247 aa5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 IRS1P35568 1242 aa5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 KIAA0319Q5VV43 1072 aa5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 DNAJC14Q6Y2X3 702 aaPredicted RBP5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 ASAP3Q8TDY4 903 aa5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 BSNDQ8WZ55 320 aa5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 FRMD6Q96NE9 622 aa5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 BHLHE41Q9C0J9 482 aaPredicted RBP5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 ZFYVE1Q9HBF4 777 aa5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 LATS2Q9NRM7 1088 aa5.76□□□□□ -1.49
RNU6-39P-201ENST00000384344 GIPC1O14908 333 aa5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 SPATA31C1P0DKV0 1188 aa5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 HOXB4P17483 251 aaPredicted RBP5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 ARL4DP49703 201 aa5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 GRIK5Q16478 980 aa5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 PEAR1Q5VY43 1037 aaPredicted RBP5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 NPAS4Q8IUM7 802 aa5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 DMRTC2Q8IXT2 367 aaPredicted RBP5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 DDX54Q8TDD1 881 aaKnown RBP5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 NXPE3Q969Y0 559 aa5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 TRIM11Q96F44 468 aa5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 POP1Q99575 1024 aaKnown RBP5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 SRCIN1Q9C0H9 1055 aa5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 ADAM19Q9H013 955 aa5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 SUV39H2Q9H5I1 410 aa5.75□□□□□ -1.49
RNU6-39P-201ENST00000384344 APBA3O96018 575 aa5.74□□□□□ -1.49
RNU6-39P-201ENST00000384344 ACPPP15309 386 aa5.74□□□□□ -1.49
RNU6-39P-201ENST00000384344 ZNF326Q5BKZ1 582 aaKnown RBP5.74□□□□□ -1.49
RNU6-39P-201ENST00000384344 CCNJLQ8IV13 435 aa5.74□□□□□ -1.49
RNU6-39P-201ENST00000384344 EPS8L3Q8TE67 593 aaKnown RBP5.74□□□□□ -1.49
RNU6-39P-201ENST00000384344 NACC1Q96RE7 527 aa5.74□□□□□ -1.49
RNU6-39P-201ENST00000384344 A0A0A0MRY4 1105 aa5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 H3BRJ5 948 aa5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 NFKBIEO00221 500 aa5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 TRPA1O75762 1119 aa5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 XRCC5P13010 732 aaKnown RBP5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 ELNP15502 786 aa5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 XPCQ01831 940 aaPredicted RBP5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 PRPF40BQ6NWY9 871 aaKnown RBP5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 WNT8BQ93098 351 aa5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 BCL2L13Q9BXK5 485 aa5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.73□□□□□ -1.49
RNU6-39P-201ENST00000384344 A0A096LPE4 126 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 A0A1W2PPZ6 126 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 CDC25BP30305 580 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 GNA15P30679 374 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 PIP4K2BP78356 416 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 COL9A3Q14050 684 aaPredicted RBP5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 IKBKEQ14164 716 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 GRM2Q14416 872 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 DTHD1Q6ZMT9 781 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 FMR1NBQ8N0W7 255 aaPredicted RBP5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 KLHL23Q8NBE8 558 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 HHIPQ96QV1 700 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 TCF12Q99081 682 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 BCO2Q9BYV7 579 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 MRS2Q9HD23 443 aa5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 SH2B1Q9NRF2 756 aaPredicted RBP5.72□□□□□ -1.49
RNU6-39P-201ENST00000384344 TMEM238LA0A1B0GVL6 79 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 LINC01387J3KSC0 135 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 EPHA1P21709 976 aa5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 EIF4BP23588 611 aaKnown RBP5.71□□□□□ -1.5
RNU6-39P-201ENST00000384344 GSTT1P30711 240 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 290.2 ms