RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 SPEF2Q9C093 1822 aa22.92■■□□□ 1.26
RPUSD3-201ENST00000383820 SLC4A2P04920 1241 aa22.91■■□□□ 1.26
RPUSD3-201ENST00000383820 CCT4P50991 539 aaKnown RBP22.91■■□□□ 1.26
RPUSD3-201ENST00000383820 REM2Q8IYK8 340 aaPredicted RBP22.91■■□□□ 1.26
RPUSD3-201ENST00000383820 PLA2G12BQ9BX93 195 aa22.91■■□□□ 1.26
RPUSD3-201ENST00000383820 LEMD3Q9Y2U8 911 aa22.91■■□□□ 1.26
RPUSD3-201ENST00000383820 MYO3BQ8WXR4 1341 aa22.9■■□□□ 1.26
RPUSD3-201ENST00000383820 IGHMBP2P38935 993 aaKnown RBP22.9■■□□□ 1.26
RPUSD3-201ENST00000383820 MMP14P50281 582 aa22.9■■□□□ 1.26
RPUSD3-201ENST00000383820 DGKZQ13574 1117 aa22.9■■□□□ 1.26
RPUSD3-201ENST00000383820 G2E3Q7L622 706 aa22.9■■□□□ 1.26
RPUSD3-201ENST00000383820 UBE3BQ7Z3V4 1068 aa22.9■■□□□ 1.26
RPUSD3-201ENST00000383820 COA1Q9GZY4 146 aa22.9■■□□□ 1.26
RPUSD3-201ENST00000383820 PAPPA2Q9BXP8 1791 aa22.9■■□□□ 1.26
RPUSD3-201ENST00000383820 FAM161AQ3B820 660 aa22.89■■□□□ 1.25
RPUSD3-201ENST00000383820 CCDC184Q52MB2 194 aa22.89■■□□□ 1.25
RPUSD3-201ENST00000383820 CACNA1FO60840 1977 aa22.89■■□□□ 1.25
RPUSD3-201ENST00000383820 AKAP11Q9UKA4 1901 aa22.88■■□□□ 1.25
RPUSD3-201ENST00000383820 ZNF646O15015 1829 aaPredicted RBP22.88■■□□□ 1.25
RPUSD3-201ENST00000383820 WTIPA6NIX2 430 aaPredicted RBP22.88■■□□□ 1.25
RPUSD3-201ENST00000383820 GCKRQ14397 625 aa22.88■■□□□ 1.25
RPUSD3-201ENST00000383820 DACT2Q5SW24 774 aa22.88■■□□□ 1.25
RPUSD3-201ENST00000383820 STRIP1Q5VSL9 837 aa22.88■■□□□ 1.25
RPUSD3-201ENST00000383820 OGFOD1Q8N543 542 aa22.88■■□□□ 1.25
RPUSD3-201ENST00000383820 MLLT1Q03111 559 aaPredicted RBP22.87■■□□□ 1.25
RPUSD3-201ENST00000383820 FLIIQ13045 1269 aa22.87■■□□□ 1.25
RPUSD3-201ENST00000383820 CSRNP1Q96S65 589 aa22.87■■□□□ 1.25
RPUSD3-201ENST00000383820 ANKRD2Q9GZV1 360 aa22.87■■□□□ 1.25
RPUSD3-201ENST00000383820 MYH16Q9H6N6 1097 aa22.87■■□□□ 1.25
RPUSD3-201ENST00000383820 RNF186Q9NXI6 227 aa22.87■■□□□ 1.25
RPUSD3-201ENST00000383820 CSF1RP07333 972 aa22.86■■□□□ 1.25
RPUSD3-201ENST00000383820 RASAL3Q86YV0 1011 aa22.86■■□□□ 1.25
RPUSD3-201ENST00000383820 LINS1Q8NG48 757 aa22.86■■□□□ 1.25
RPUSD3-201ENST00000383820 DNAAF4Q8WXU2 420 aa22.86■■□□□ 1.25
RPUSD3-201ENST00000383820 TRPA1O75762 1119 aa22.85■■□□□ 1.25
RPUSD3-201ENST00000383820 ITGA6P23229 1130 aa22.85■■□□□ 1.25
RPUSD3-201ENST00000383820 CASP7P55210 303 aa22.85■■□□□ 1.25
RPUSD3-201ENST00000383820 MPHOSPH8Q99549 860 aa22.85■■□□□ 1.25
RPUSD3-201ENST00000383820 ZNF804BA4D1E1 1349 aa22.84■■□□□ 1.25
RPUSD3-201ENST00000383820 FKBP5Q13451 457 aaPredicted RBP22.84■■□□□ 1.25
RPUSD3-201ENST00000383820 NBPF9Q3BBW0 867 aa22.84■■□□□ 1.25
RPUSD3-201ENST00000383820 WNT10BO00744 389 aa22.83■■□□□ 1.25
RPUSD3-201ENST00000383820 TXNRD3Q86VQ6 643 aa22.83■■□□□ 1.25
RPUSD3-201ENST00000383820 FANCIQ9NVI1 1328 aa22.82■■□□□ 1.24
RPUSD3-201ENST00000383820 TTLL5Q6EMB2 1281 aa22.82■■□□□ 1.24
RPUSD3-201ENST00000383820 WDR63Q8IWG1 891 aa22.82■■□□□ 1.24
RPUSD3-201ENST00000383820 FBXW7Q969H0 707 aa22.82■■□□□ 1.24
RPUSD3-201ENST00000383820 MXD3Q9BW11 206 aa22.82■■□□□ 1.24
RPUSD3-201ENST00000383820 NF2P35240 595 aa22.81■■□□□ 1.24
RPUSD3-201ENST00000383820 HDAC9Q9UKV0 1011 aa22.81■■□□□ 1.24
RPUSD3-201ENST00000383820 VAMP4O75379 141 aa22.8■■□□□ 1.24
RPUSD3-201ENST00000383820 ANKRD18BA2A2Z9 1011 aa22.79■■□□□ 1.24
RPUSD3-201ENST00000383820 KCNJ4P48050 445 aa22.79■■□□□ 1.24
RPUSD3-201ENST00000383820 CHRNDQ07001 517 aa22.79■■□□□ 1.24
RPUSD3-201ENST00000383820 MRS2Q9HD23 443 aa22.79■■□□□ 1.24
RPUSD3-201ENST00000383820 UBE2Q2LH0YL09 131 aa22.78■■□□□ 1.24
RPUSD3-201ENST00000383820 KLRK1P26718 216 aa22.78■■□□□ 1.24
RPUSD3-201ENST00000383820 C15orf52Q6ZUT6 534 aaKnown RBP22.78■■□□□ 1.24
RPUSD3-201ENST00000383820 MOB2Q70IA6 237 aa22.78■■□□□ 1.24
RPUSD3-201ENST00000383820 APOBEC3FQ8IUX4 373 aaKnown RBP22.78■■□□□ 1.24
RPUSD3-201ENST00000383820 SCAF8Q9UPN6 1271 aaKnown RBP22.78■■□□□ 1.24
RPUSD3-201ENST00000383820 GTF2IP78347 998 aa22.77■■□□□ 1.24
RPUSD3-201ENST00000383820 PRAMEF18Q5VWM3 479 aa22.77■■□□□ 1.24
RPUSD3-201ENST00000383820 ZBED3Q96IU2 234 aaPredicted RBP22.77■■□□□ 1.24
RPUSD3-201ENST00000383820 CD209Q9NNX6 404 aa22.77■■□□□ 1.24
RPUSD3-201ENST00000383820 SASH1O94885 1247 aa22.76■■□□□ 1.23
RPUSD3-201ENST00000383820 IFIT5Q13325 482 aaKnown RBP22.76■■□□□ 1.23
RPUSD3-201ENST00000383820 TTLL12Q14166 644 aaPredicted RBP22.76■■□□□ 1.23
RPUSD3-201ENST00000383820 CTU1Q7Z7A3 348 aaKnown RBP22.76■■□□□ 1.23
RPUSD3-201ENST00000383820 KIAA0825Q8IV33 1275 aa22.76■■□□□ 1.23
RPUSD3-201ENST00000383820 COL1A1P02452 1464 aaPredicted RBP22.75■■□□□ 1.23
RPUSD3-201ENST00000383820 EXOSC9Q06265 439 aaKnown RBP22.75■■□□□ 1.23
RPUSD3-201ENST00000383820 IRS2Q9Y4H2 1338 aa22.75■■□□□ 1.23
RPUSD3-201ENST00000383820 TM4SF4P48230 202 aa22.74■■□□□ 1.23
RPUSD3-201ENST00000383820 FOXO4P98177 505 aa22.74■■□□□ 1.23
RPUSD3-201ENST00000383820 BEND3Q5T5X7 828 aa22.74■■□□□ 1.23
RPUSD3-201ENST00000383820 ARMC9Q7Z3E5 817 aa22.74■■□□□ 1.23
RPUSD3-201ENST00000383820 A0A1B0GUL6 1792 aa22.73■■□□□ 1.23
RPUSD3-201ENST00000383820 MTMR14Q8NCE2 650 aa22.73■■□□□ 1.23
RPUSD3-201ENST00000383820 ANP32CO43423 234 aa22.72■■□□□ 1.23
RPUSD3-201ENST00000383820 FKBP1AP62942 108 aaKnown RBP22.72■■□□□ 1.23
RPUSD3-201ENST00000383820 NOM1Q5C9Z4 860 aaKnown RBP22.72■■□□□ 1.23
RPUSD3-201ENST00000383820 ZNF804AQ7Z570 1209 aa22.72■■□□□ 1.23
RPUSD3-201ENST00000383820 F6X3S4 739 aa22.71■■□□□ 1.23
RPUSD3-201ENST00000383820 TAF5LO75529 589 aa22.71■■□□□ 1.23
RPUSD3-201ENST00000383820 IL1R1P14778 569 aa22.71■■□□□ 1.23
RPUSD3-201ENST00000383820 SREBF2Q12772 1141 aa22.71■■□□□ 1.23
RPUSD3-201ENST00000383820 DLGAP5Q15398 846 aa22.71■■□□□ 1.23
RPUSD3-201ENST00000383820 PKN2Q16513 984 aaKnown RBP22.71■■□□□ 1.23
RPUSD3-201ENST00000383820 CHMP3Q9Y3E7 222 aa22.71■■□□□ 1.23
RPUSD3-201ENST00000383820 PTPN12Q05209 780 aaKnown RBP22.7■■□□□ 1.22
RPUSD3-201ENST00000383820 LDLRAD1Q5T700 205 aa22.7■■□□□ 1.22
RPUSD3-201ENST00000383820 LMBR1LQ6UX01 489 aa22.7■■□□□ 1.22
RPUSD3-201ENST00000383820 CERS5Q8N5B7 392 aa22.7■■□□□ 1.22
RPUSD3-201ENST00000383820 HELBQ8NG08 1087 aaPredicted RBP22.7■■□□□ 1.22
RPUSD3-201ENST00000383820 SALL2Q9Y467 1007 aaPredicted RBP22.7■■□□□ 1.22
RPUSD3-201ENST00000383820 PPP2R3BQ9Y5P8 575 aa22.7■■□□□ 1.22
RPUSD3-201ENST00000383820 ECM29Q5VYK3 1845 aa22.7■■□□□ 1.22
RPUSD3-201ENST00000383820 SNAP23O00161 211 aa22.69■■□□□ 1.22
RPUSD3-201ENST00000383820 GRM8O00222 908 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms