RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
SEC13-203ENST00000383801 SEC31BQ9NQW1 1179 aa16.24■□□□□ 0.19
SEC13-203ENST00000383801 LIMCH1Q9UPQ0 1083 aa16.24■□□□□ 0.19
SEC13-203ENST00000383801 CARMIL3Q8ND23 1372 aa16.24■□□□□ 0.19
SEC13-203ENST00000383801 AKAP11Q9UKA4 1901 aa16.24■□□□□ 0.19
SEC13-203ENST00000383801 KCNQ4P56696 695 aa16.23■□□□□ 0.19
SEC13-203ENST00000383801 UBE3CQ15386 1083 aa16.23■□□□□ 0.19
SEC13-203ENST00000383801 ZNF589Q86UQ0 364 aaPredicted RBP16.23■□□□□ 0.19
SEC13-203ENST00000383801 APPBP2Q92624 585 aa16.23■□□□□ 0.19
SEC13-203ENST00000383801 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
SEC13-203ENST00000383801 SH2B1Q9NRF2 756 aaPredicted RBP16.23■□□□□ 0.19
SEC13-203ENST00000383801 CTNNA3Q9UI47 895 aa16.23■□□□□ 0.19
SEC13-203ENST00000383801 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
SEC13-203ENST00000383801 C4AP0C0L4 1744 aa16.23■□□□□ 0.19
SEC13-203ENST00000383801 CASTP20810 708 aaKnown RBP16.22■□□□□ 0.19
SEC13-203ENST00000383801 MCAMP43121 646 aa16.22■□□□□ 0.19
SEC13-203ENST00000383801 ZAP70P43403 619 aa16.22■□□□□ 0.19
SEC13-203ENST00000383801 TMED8Q6PL24 325 aaPredicted RBP16.22■□□□□ 0.19
SEC13-203ENST00000383801 ANKRD2Q9GZV1 360 aa16.22■□□□□ 0.19
SEC13-203ENST00000383801 LRRC4BQ9NT99 713 aa16.22■□□□□ 0.19
SEC13-203ENST00000383801 UBR3Q6ZT12 1888 aa16.22■□□□□ 0.19
SEC13-203ENST00000383801 FRAT2O75474 233 aaPredicted RBP16.22■□□□□ 0.19
SEC13-203ENST00000383801 CHRNDQ07001 517 aa16.22■□□□□ 0.19
SEC13-203ENST00000383801 JAKMIP1Q96N16 626 aaKnown RBP16.22■□□□□ 0.19
SEC13-203ENST00000383801 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
SEC13-203ENST00000383801 PDRG1Q9NUG6 133 aa16.22■□□□□ 0.19
SEC13-203ENST00000383801 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
SEC13-203ENST00000383801 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.22■□□□□ 0.19
SEC13-203ENST00000383801 MYH7P12883 1935 aa16.21■□□□□ 0.19
SEC13-203ENST00000383801 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
SEC13-203ENST00000383801 RPS8P62241 208 aaKnown RBP16.21■□□□□ 0.19
SEC13-203ENST00000383801 BLOC1S2Q6QNY1 142 aa16.21■□□□□ 0.19
SEC13-203ENST00000383801 GNL3LQ9NVN8 582 aaKnown RBP16.21■□□□□ 0.19
SEC13-203ENST00000383801 NDUFB9Q9Y6M9 179 aa16.21■□□□□ 0.19
SEC13-203ENST00000383801 SEMA3EO15041 775 aa16.2■□□□□ 0.18
SEC13-203ENST00000383801 HSPD1P10809 573 aaKnown RBP16.2■□□□□ 0.18
SEC13-203ENST00000383801 MCM4P33991 863 aa16.2■□□□□ 0.18
SEC13-203ENST00000383801 ADD2P35612 726 aa16.2■□□□□ 0.18
SEC13-203ENST00000383801 BICDL1Q6ZP65 573 aa16.2■□□□□ 0.18
SEC13-203ENST00000383801 FLAD1Q8NFF5 587 aa16.2■□□□□ 0.18
SEC13-203ENST00000383801 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
SEC13-203ENST00000383801 MAST3O60307 1309 aa16.19■□□□□ 0.18
SEC13-203ENST00000383801 CASZ1Q86V15 1759 aa16.19■□□□□ 0.18
SEC13-203ENST00000383801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.19■□□□□ 0.18
SEC13-203ENST00000383801 TRIM37O94972 964 aa16.19■□□□□ 0.18
SEC13-203ENST00000383801 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
SEC13-203ENST00000383801 PHKA1P46020 1223 aa16.19■□□□□ 0.18
SEC13-203ENST00000383801 AK2P54819 239 aa16.19■□□□□ 0.18
SEC13-203ENST00000383801 SCARF1Q14162 830 aa16.19■□□□□ 0.18
SEC13-203ENST00000383801 SPATA5Q8NB90 893 aa16.19■□□□□ 0.18
SEC13-203ENST00000383801 NEK1Q96PY6 1258 aa16.19■□□□□ 0.18
SEC13-203ENST00000383801 MINPP1Q9UNW1 487 aa16.19■□□□□ 0.18
SEC13-203ENST00000383801 RPS6KB1P23443 525 aa16.18■□□□□ 0.18
SEC13-203ENST00000383801 RXRBP28702 533 aa16.18■□□□□ 0.18
SEC13-203ENST00000383801 MAP3K12Q12852 859 aa16.18■□□□□ 0.18
SEC13-203ENST00000383801 ADCK5Q3MIX3 580 aa16.18■□□□□ 0.18
SEC13-203ENST00000383801 CAVIN4Q5BKX8 364 aa16.18■□□□□ 0.18
SEC13-203ENST00000383801 TNPO1Q92973 898 aaKnown RBP16.18■□□□□ 0.18
SEC13-203ENST00000383801 OSBP2Q969R2 916 aa16.18■□□□□ 0.18
SEC13-203ENST00000383801 SEC62Q99442 399 aaKnown RBP16.18■□□□□ 0.18
SEC13-203ENST00000383801 ZNF804BA4D1E1 1349 aa16.18■□□□□ 0.18
SEC13-203ENST00000383801 PDS5AQ29RF7 1337 aaKnown RBP16.18■□□□□ 0.18
SEC13-203ENST00000383801 TM4SF1P30408 202 aa16.17■□□□□ 0.18
SEC13-203ENST00000383801 NFIXQ14938 502 aa16.17■□□□□ 0.18
SEC13-203ENST00000383801 TXNRD1Q16881 649 aa16.17■□□□□ 0.18
SEC13-203ENST00000383801 FBXL16Q8N461 479 aa16.17■□□□□ 0.18
SEC13-203ENST00000383801 HELBQ8NG08 1087 aaPredicted RBP16.17■□□□□ 0.18
SEC13-203ENST00000383801 GOLGA6L22H0YM25 854 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 CYP21A2P08686 494 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 GYS1P13807 737 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 WASHC4Q2M389 1173 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 SLC9C2Q5TAH2 1124 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 CNBD1Q8NA66 436 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 A0A1B0GUL6 1792 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 DOCK2Q92608 1830 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 NPHP1O15259 732 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 ST5P78524 1137 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 SKOR2Q2VWA4 1001 aaPredicted RBP16.16■□□□□ 0.18
SEC13-203ENST00000383801 DENND2AQ9ULE3 1009 aa16.16■□□□□ 0.18
SEC13-203ENST00000383801 ZMYM6O95789 1325 aa16.15■□□□□ 0.18
SEC13-203ENST00000383801 RGPD3A6NKT7 1758 aaPredicted RBP16.15■□□□□ 0.18
SEC13-203ENST00000383801 RGPD4Q7Z3J3 1758 aa16.15■□□□□ 0.18
SEC13-203ENST00000383801 PHF14O94880 888 aa16.15■□□□□ 0.18
SEC13-203ENST00000383801 GNAT2P19087 354 aa16.15■□□□□ 0.18
SEC13-203ENST00000383801 ALX1Q15699 326 aa16.15■□□□□ 0.18
SEC13-203ENST00000383801 IMMTQ16891 758 aaKnown RBP16.15■□□□□ 0.18
SEC13-203ENST00000383801 CCDC129Q6ZRS4 1044 aa16.15■□□□□ 0.18
SEC13-203ENST00000383801 AMIGO3Q86WK7 504 aa16.15■□□□□ 0.18
SEC13-203ENST00000383801 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
SEC13-203ENST00000383801 M0R2C6 588 aa16.14■□□□□ 0.17
SEC13-203ENST00000383801 GRAPQ13588 217 aa16.14■□□□□ 0.17
SEC13-203ENST00000383801 RASGRF1Q13972 1273 aa16.14■□□□□ 0.17
SEC13-203ENST00000383801 C3orf67Q6ZVT6 689 aa16.14■□□□□ 0.17
SEC13-203ENST00000383801 DHX32Q7L7V1 743 aaKnown RBP16.14■□□□□ 0.17
SEC13-203ENST00000383801 PROM2Q8N271 834 aa16.14■□□□□ 0.17
SEC13-203ENST00000383801 ZGPATQ8N5A5 531 aaKnown RBP16.14■□□□□ 0.17
SEC13-203ENST00000383801 GRAPLQ8TC17 118 aaPredicted RBP16.14■□□□□ 0.17
SEC13-203ENST00000383801 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
SEC13-203ENST00000383801 LEMD3Q9Y2U8 911 aa16.14■□□□□ 0.17
SEC13-203ENST00000383801 TCRBV5S4A2TA0A5A2 114 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms