RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 TMX3Q96JJ7 454 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 CCDC94Q9BW85 323 aaPredicted RBP15.99■□□□□ 0.15
SNPH-201ENST00000381867 ANKARQ7Z5J8 1434 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 CCDC194A0A1B0GVG4 234 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 PANK2Q9BZ23 570 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 DDX21Q9NR30 783 aaKnown RBP eCLIP15.99■□□□□ 0.15
SNPH-201ENST00000381867 PLA2R1Q13018 1463 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 CCDC186Q7Z3E2 898 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 ZFP91Q96JP5 570 aaPredicted RBP15.99■□□□□ 0.15
SNPH-201ENST00000381867 HMG20BQ9P0W2 317 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 RSPH14Q9UHP6 348 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 METP08581 1390 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 A2ML1A8K2U0 1454 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 VAMP4O75379 141 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 SCLT1Q96NL6 688 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 ATP5J2-PTCD1G3V325 749 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 SLU7O95391 586 aaKnown RBP15.99■□□□□ 0.15
SNPH-201ENST00000381867 ATP8B2P98198 1209 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 C6orf163Q5TEZ5 329 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 ANO6Q4KMQ2 910 aa15.98■□□□□ 0.15
SNPH-201ENST00000381867 IQCA1Q86XH1 822 aa15.98■□□□□ 0.15
SNPH-201ENST00000381867 DNAI1Q9UI46 699 aa15.98■□□□□ 0.15
SNPH-201ENST00000381867 BAG3O95817 575 aa15.98■□□□□ 0.15
SNPH-201ENST00000381867 DZIP3Q86Y13 1208 aaKnown RBP15.98■□□□□ 0.15
SNPH-201ENST00000381867 IFIT3O14879 490 aaKnown RBP15.98■□□□□ 0.15
SNPH-201ENST00000381867 UBASH3AP57075 661 aa15.98■□□□□ 0.15
SNPH-201ENST00000381867 AMPD3Q01432 767 aa15.98■□□□□ 0.15
SNPH-201ENST00000381867 BBXQ8WY36 941 aaPredicted RBP15.98■□□□□ 0.15
SNPH-201ENST00000381867 NLRP5P59047 1200 aa15.98■□□□□ 0.15
SNPH-201ENST00000381867 SLC39A6Q13433 755 aa15.98■□□□□ 0.15
SNPH-201ENST00000381867 USP16Q9Y5T5 823 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 LMTK2Q8IWU2 1503 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 FSD2A1L4K1 749 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 MACROD2A1Z1Q3 448 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 CCDC40Q4G0X9 1142 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 TPTE2Q6XPS3 522 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNPH-201ENST00000381867 PARP10Q53GL7 1025 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 NBPF14Q5TI25 921 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 ZNF444Q8N0Y2 327 aaPredicted RBP15.97■□□□□ 0.15
SNPH-201ENST00000381867 ACSBG1Q96GR2 724 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 ZMYM4Q5VZL5 1548 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 GOLIM4O00461 696 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 MYCNP04198 464 aaPredicted RBP15.97■□□□□ 0.15
SNPH-201ENST00000381867 TRIM21P19474 475 aaKnown RBP15.97■□□□□ 0.15
SNPH-201ENST00000381867 IARSP41252 1262 aaKnown RBP15.97■□□□□ 0.15
SNPH-201ENST00000381867 CCDC82Q8N4S0 544 aa15.97■□□□□ 0.15
SNPH-201ENST00000381867 CCDC96Q2M329 555 aa15.96■□□□□ 0.15
SNPH-201ENST00000381867 SNX21Q969T3 373 aa15.96■□□□□ 0.15
SNPH-201ENST00000381867 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
SNPH-201ENST00000381867 ORC3Q9UBD5 711 aaPredicted RBP15.96■□□□□ 0.15
SNPH-201ENST00000381867 N4BP3O15049 544 aa15.96■□□□□ 0.15
SNPH-201ENST00000381867 IFI16Q16666 785 aaKnown RBP15.96■□□□□ 0.15
SNPH-201ENST00000381867 RHPN1Q8TCX5 695 aa15.96■□□□□ 0.15
SNPH-201ENST00000381867 PHACTR3Q96KR7 559 aa15.96■□□□□ 0.15
SNPH-201ENST00000381867 NEK1Q96PY6 1258 aa15.96■□□□□ 0.15
SNPH-201ENST00000381867 NOP2P46087 812 aaKnown RBP15.96■□□□□ 0.15
SNPH-201ENST00000381867 SPATA24Q86W54 205 aa15.96■□□□□ 0.15
SNPH-201ENST00000381867 MAP3K4Q9Y6R4 1608 aa15.96■□□□□ 0.15
SNPH-201ENST00000381867 NUCB1Q02818 461 aa15.96■□□□□ 0.15
SNPH-201ENST00000381867 PRPF4BQ13523 1007 aaKnown RBP15.96■□□□□ 0.15
SNPH-201ENST00000381867 NSRP1Q9H0G5 558 aaKnown RBP15.96■□□□□ 0.15
SNPH-201ENST00000381867 ERVV-2B6SEH9 535 aa15.96■□□□□ 0.14
SNPH-201ENST00000381867 ISM2Q6H9L7 571 aa15.96■□□□□ 0.14
SNPH-201ENST00000381867 USP48Q86UV5 1035 aa15.96■□□□□ 0.14
SNPH-201ENST00000381867 PPM1EQ8WY54 764 aa15.96■□□□□ 0.14
SNPH-201ENST00000381867 CTAGE1Q96RT6 745 aa15.96■□□□□ 0.14
SNPH-201ENST00000381867 CNPY2Q9Y2B0 182 aa15.96■□□□□ 0.14
SNPH-201ENST00000381867 OPA1O60313 960 aa15.95■□□□□ 0.14
SNPH-201ENST00000381867 MCM6Q14566 821 aa15.95■□□□□ 0.14
SNPH-201ENST00000381867 CALML4Q96GE6 196 aa15.95■□□□□ 0.14
SNPH-201ENST00000381867 CATIPQ7Z7H3 387 aa15.95■□□□□ 0.14
SNPH-201ENST00000381867 RANBP6O60518 1105 aaKnown RBP15.95■□□□□ 0.14
SNPH-201ENST00000381867 CETN1Q12798 172 aa15.95■□□□□ 0.14
SNPH-201ENST00000381867 ZNF790Q6PG37 636 aa15.95■□□□□ 0.14
SNPH-201ENST00000381867 CCDC155Q8N6L0 562 aa15.95■□□□□ 0.14
SNPH-201ENST00000381867 ZNF622Q969S3 477 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNPH-201ENST00000381867 TCP11L1Q9NUJ3 509 aa15.95■□□□□ 0.14
SNPH-201ENST00000381867 NIP7Q9Y221 180 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNPH-201ENST00000381867 SLC52A2Q9HAB3 445 aa15.95■□□□□ 0.14
SNPH-201ENST00000381867 CYLC1P35663 651 aaPredicted RBP15.94■□□□□ 0.14
SNPH-201ENST00000381867 SYKP43405 635 aa15.94■□□□□ 0.14
SNPH-201ENST00000381867 DNAI2Q9GZS0 605 aa15.94■□□□□ 0.14
SNPH-201ENST00000381867 KIAA0232Q92628 1395 aa15.94■□□□□ 0.14
SNPH-201ENST00000381867 ATP2C2O75185 946 aa15.94■□□□□ 0.14
SNPH-201ENST00000381867 GOLGA1Q92805 767 aa15.94■□□□□ 0.14
SNPH-201ENST00000381867 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
SNPH-201ENST00000381867 CTNNA2P26232 953 aa15.94■□□□□ 0.14
SNPH-201ENST00000381867 RBM25P49756 843 aaKnown RBP15.94■□□□□ 0.14
SNPH-201ENST00000381867 FBF1Q8TES7 1133 aa15.94■□□□□ 0.14
SNPH-201ENST00000381867 AKR1B10O60218 316 aa15.94■□□□□ 0.14
SNPH-201ENST00000381867 PPP4R3AQ6IN85 833 aa15.94■□□□□ 0.14
SNPH-201ENST00000381867 RMND1Q9NWS8 449 aa15.94■□□□□ 0.14
SNPH-201ENST00000381867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.14
SNPH-201ENST00000381867 ADGRB3O60242 1522 aa15.93■□□□□ 0.14
SNPH-201ENST00000381867 CHL1O00533 1208 aa15.93■□□□□ 0.14
SNPH-201ENST00000381867 CAPN2P17655 700 aa15.93■□□□□ 0.14
SNPH-201ENST00000381867 ANKRD2Q9GZV1 360 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms