RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 NEXNQ0ZGT2 675 aa14.05□□□□□ -0.16
SHOX-203ENST00000381578 STAP2Q9UGK3 403 aa14.05□□□□□ -0.16
SHOX-203ENST00000381578 VIRMAQ69YN4 1812 aaKnown RBP14.05□□□□□ -0.16
SHOX-203ENST00000381578 SLIT1O75093 1534 aa14.05□□□□□ -0.16
SHOX-203ENST00000381578 USP32Q8NFA0 1604 aa14.05□□□□□ -0.16
SHOX-203ENST00000381578 MYO1CO00159 1063 aa14.05□□□□□ -0.16
SHOX-203ENST00000381578 KRT32Q14532 448 aa14.05□□□□□ -0.16
SHOX-203ENST00000381578 TTC31Q49AM3 519 aaPredicted RBP14.05□□□□□ -0.16
SHOX-203ENST00000381578 MICALL1Q8N3F8 863 aa14.05□□□□□ -0.16
SHOX-203ENST00000381578 AATKQ6ZMQ8 1374 aa14.05□□□□□ -0.16
SHOX-203ENST00000381578 CBFA2T2O43439 604 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 FANCCQ00597 558 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 PPARDQ03181 441 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 FEZ2Q9UHY8 353 aaPredicted RBP14.04□□□□□ -0.16
SHOX-203ENST00000381578 NPHP4O75161 1426 aaPredicted RBP14.04□□□□□ -0.16
SHOX-203ENST00000381578 ATP10DQ9P241 1426 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 RALYLQ86SE5 291 aaKnown RBP14.04□□□□□ -0.16
SHOX-203ENST00000381578 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 ORAI2Q96SN7 254 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 RAI14Q9P0K7 980 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 MAP3K2Q9Y2U5 619 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 CPS1P31327 1500 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 SETD1BQ9UPS6 1966 aaKnown RBP14.04□□□□□ -0.16
SHOX-203ENST00000381578 TAF7LQ5H9L4 462 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 NFXL1Q6ZNB6 911 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 PI4K2BQ8TCG2 481 aa14.04□□□□□ -0.16
SHOX-203ENST00000381578 CYP2C19P33261 490 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 MNAT1P51948 309 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 PPFIBP1Q86W92 1011 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 CAGE1Q8TC20 777 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 CENPHQ9H3R5 247 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 TRIM29Q14134 588 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 HINFPQ9BQA5 517 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 ACBD3Q9H3P7 528 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 TAF6LQ9Y6J9 622 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 CDC42BPGQ6DT37 1551 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 PNPLA6Q8IY17 1366 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 ATP1A3P13637 1013 aa14.03□□□□□ -0.16
SHOX-203ENST00000381578 SETQ01105 290 aaPredicted RBP14.03□□□□□ -0.16
SHOX-203ENST00000381578 ADKP55263 362 aaKnown RBP14.02□□□□□ -0.16
SHOX-203ENST00000381578 WWC2Q6AWC2 1192 aa14.02□□□□□ -0.16
SHOX-203ENST00000381578 GOLGA1Q92805 767 aa14.02□□□□□ -0.17
SHOX-203ENST00000381578 PDE11AQ9HCR9 933 aa14.02□□□□□ -0.17
SHOX-203ENST00000381578 RRP15Q9Y3B9 282 aaKnown RBP14.02□□□□□ -0.17
SHOX-203ENST00000381578 FKBP4Q02790 459 aaKnown RBP eCLIP14.02□□□□□ -0.17
SHOX-203ENST00000381578 DNAJC21Q5F1R6 531 aaKnown RBP14.02□□□□□ -0.17
SHOX-203ENST00000381578 MPRIPQ6WCQ1 1025 aa14.02□□□□□ -0.17
SHOX-203ENST00000381578 SSH3Q8TE77 659 aa14.02□□□□□ -0.17
SHOX-203ENST00000381578 NOC3LQ8WTT2 800 aaKnown RBP14.02□□□□□ -0.17
SHOX-203ENST00000381578 KIF24Q5T7B8 1368 aa14.02□□□□□ -0.17
SHOX-203ENST00000381578 CCZ1BP86790 482 aa14.01□□□□□ -0.17
SHOX-203ENST00000381578 CCZ1P86791 482 aaPredicted RBP14.01□□□□□ -0.17
SHOX-203ENST00000381578 ZNF446Q9NWS9 450 aa14.01□□□□□ -0.17
SHOX-203ENST00000381578 ORC3Q9UBD5 711 aaPredicted RBP14.01□□□□□ -0.17
SHOX-203ENST00000381578 SSH2Q76I76 1423 aa14.01□□□□□ -0.17
SHOX-203ENST00000381578 KIF5CO60282 957 aa14.01□□□□□ -0.17
SHOX-203ENST00000381578 MTX1Q13505 466 aa14.01□□□□□ -0.17
SHOX-203ENST00000381578 SART3Q15020 963 aaKnown RBP14.01□□□□□ -0.17
SHOX-203ENST00000381578 LRRFIP1Q32MZ4 808 aaKnown RBP14.01□□□□□ -0.17
SHOX-203ENST00000381578 E4F1Q66K89 784 aaPredicted RBP14.01□□□□□ -0.17
SHOX-203ENST00000381578 FLT4P35916 1363 aa14.01□□□□□ -0.17
SHOX-203ENST00000381578 PATL2C9JE40 543 aaKnown RBP14.01□□□□□ -0.17
SHOX-203ENST00000381578 SPECC1Q5M775 1068 aa14.01□□□□□ -0.17
SHOX-203ENST00000381578 FKBP15Q5T1M5 1219 aa14.01□□□□□ -0.17
SHOX-203ENST00000381578 CNNM3Q8NE01 707 aa14.01□□□□□ -0.17
SHOX-203ENST00000381578 TULP1O00294 542 aaPredicted RBP14□□□□□ -0.17
SHOX-203ENST00000381578 GOLIM4O00461 696 aa14□□□□□ -0.17
SHOX-203ENST00000381578 WDHD1O75717 1129 aaPredicted RBP14□□□□□ -0.17
SHOX-203ENST00000381578 SYKP43405 635 aa14□□□□□ -0.17
SHOX-203ENST00000381578 NDUFA8P51970 172 aa14□□□□□ -0.17
SHOX-203ENST00000381578 COL9A3Q14050 684 aaPredicted RBP14□□□□□ -0.17
SHOX-203ENST00000381578 C1orf141Q5JVX7 400 aa14□□□□□ -0.17
SHOX-203ENST00000381578 ZNF589Q86UQ0 364 aaPredicted RBP14□□□□□ -0.17
SHOX-203ENST00000381578 GOLPH3LQ9H4A5 285 aa14□□□□□ -0.17
SHOX-203ENST00000381578 C19orf44Q9H6X5 657 aa14□□□□□ -0.17
SHOX-203ENST00000381578 ZKSCAN7Q9P0L1 754 aaPredicted RBP14□□□□□ -0.17
SHOX-203ENST00000381578 HOOK1Q9UJC3 728 aaKnown RBP14□□□□□ -0.17
SHOX-203ENST00000381578 BTBD11A6QL63 1104 aa14□□□□□ -0.17
SHOX-203ENST00000381578 SPTLC2O15270 562 aa14□□□□□ -0.17
SHOX-203ENST00000381578 PLA2G4AP47712 749 aa14□□□□□ -0.17
SHOX-203ENST00000381578 PIP4K2AP48426 406 aaPredicted RBP14□□□□□ -0.17
SHOX-203ENST00000381578 KRT28Q7Z3Y7 464 aa14□□□□□ -0.17
SHOX-203ENST00000381578 RASSF8Q8NHQ8 419 aa14□□□□□ -0.17
SHOX-203ENST00000381578 CCDC85AQ96PX6 553 aaPredicted RBP14□□□□□ -0.17
SHOX-203ENST00000381578 TLR7Q9NYK1 1049 aaKnown RBP14□□□□□ -0.17
SHOX-203ENST00000381578 DDX58O95786 925 aaKnown RBP14□□□□□ -0.17
SHOX-203ENST00000381578 DHX8Q14562 1220 aaKnown RBP14□□□□□ -0.17
SHOX-203ENST00000381578 LONRF3Q496Y0 759 aa14□□□□□ -0.17
SHOX-203ENST00000381578 SMARCC1Q92922 1105 aaPredicted RBP14□□□□□ -0.17
SHOX-203ENST00000381578 PCMTD1Q96MG8 357 aaPredicted RBP14□□□□□ -0.17
SHOX-203ENST00000381578 SNRKQ9NRH2 765 aa14□□□□□ -0.17
SHOX-203ENST00000381578 ELP1O95163 1332 aa13.99□□□□□ -0.17
SHOX-203ENST00000381578 GOLGA8BA8MQT2 603 aa13.99□□□□□ -0.17
SHOX-203ENST00000381578 RXRAP19793 462 aa13.99□□□□□ -0.17
SHOX-203ENST00000381578 ZNF569Q5MCW4 686 aa13.99□□□□□ -0.17
SHOX-203ENST00000381578 CPLX2Q6PUV4 134 aaKnown RBP13.99□□□□□ -0.17
SHOX-203ENST00000381578 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
SHOX-203ENST00000381578 EYA1Q99502 592 aa13.99□□□□□ -0.17
SHOX-203ENST00000381578 BAG1Q99933 345 aaPredicted RBP13.99□□□□□ -0.17
SHOX-203ENST00000381578 ADAM21Q9UKJ8 722 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms