RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 PRR5LQ6MZQ0 368 aa13.19□□□□□ -0.3
FAM239A-201ENST00000381108 SEC62Q99442 399 aaKnown RBP13.19□□□□□ -0.3
FAM239A-201ENST00000381108 A0A1B0GUL6 1792 aa13.19□□□□□ -0.3
FAM239A-201ENST00000381108 FGFR2P21802 821 aa13.18□□□□□ -0.3
FAM239A-201ENST00000381108 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
FAM239A-201ENST00000381108 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.18□□□□□ -0.3
FAM239A-201ENST00000381108 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
FAM239A-201ENST00000381108 SERPINB2P05120 415 aa13.18□□□□□ -0.3
FAM239A-201ENST00000381108 HSPA4P34932 840 aa13.18□□□□□ -0.3
FAM239A-201ENST00000381108 DDR1Q08345 913 aa13.18□□□□□ -0.3
FAM239A-201ENST00000381108 COL23A1Q86Y22 540 aaPredicted RBP13.18□□□□□ -0.3
FAM239A-201ENST00000381108 BSDC1Q9NW68 430 aaPredicted RBP13.18□□□□□ -0.3
FAM239A-201ENST00000381108 AKAP11Q9UKA4 1901 aa13.18□□□□□ -0.3
FAM239A-201ENST00000381108 CCDC171Q6TFL3 1326 aa13.18□□□□□ -0.3
FAM239A-201ENST00000381108 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
FAM239A-201ENST00000381108 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
FAM239A-201ENST00000381108 KCNJ4P48050 445 aa13.17□□□□□ -0.3
FAM239A-201ENST00000381108 SNX21Q969T3 373 aa13.17□□□□□ -0.3
FAM239A-201ENST00000381108 RFX7Q2KHR2 1363 aa13.17□□□□□ -0.3
FAM239A-201ENST00000381108 RPS8P62241 208 aaKnown RBP13.17□□□□□ -0.3
FAM239A-201ENST00000381108 ST5P78524 1137 aa13.17□□□□□ -0.3
FAM239A-201ENST00000381108 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
FAM239A-201ENST00000381108 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
FAM239A-201ENST00000381108 TM4SF1P30408 202 aa13.16□□□□□ -0.3
FAM239A-201ENST00000381108 NFKBIBQ15653 356 aa13.16□□□□□ -0.3
FAM239A-201ENST00000381108 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
FAM239A-201ENST00000381108 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
FAM239A-201ENST00000381108 SLC51AQ86UW1 340 aa13.16□□□□□ -0.3
FAM239A-201ENST00000381108 UPF3BQ9BZI7 483 aaKnown RBP13.16□□□□□ -0.3
FAM239A-201ENST00000381108 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.3
FAM239A-201ENST00000381108 ST18O60284 1047 aa13.15□□□□□ -0.3
FAM239A-201ENST00000381108 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
FAM239A-201ENST00000381108 BCAMP50895 628 aa13.15□□□□□ -0.3
FAM239A-201ENST00000381108 NEK4P51957 841 aa13.15□□□□□ -0.3
FAM239A-201ENST00000381108 ANAPC15P60006 121 aa13.15□□□□□ -0.3
FAM239A-201ENST00000381108 MSL1Q68DK7 614 aa13.15□□□□□ -0.3
FAM239A-201ENST00000381108 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.3
FAM239A-201ENST00000381108 RASEFQ8IZ41 740 aa13.15□□□□□ -0.3
FAM239A-201ENST00000381108 MYO5AQ9Y4I1 1855 aaKnown RBP13.15□□□□□ -0.3
FAM239A-201ENST00000381108 RBM8AQ9Y5S9 174 aaKnown RBP13.15□□□□□ -0.3
FAM239A-201ENST00000381108 K7ELQ4 463 aaPredicted RBP13.15□□□□□ -0.3
FAM239A-201ENST00000381108 POLRMTO00411 1230 aaKnown RBP13.15□□□□□ -0.3
FAM239A-201ENST00000381108 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
FAM239A-201ENST00000381108 CYP2E1P05181 493 aaPredicted RBP13.15□□□□□ -0.3
FAM239A-201ENST00000381108 ARID4AP29374 1257 aaPredicted RBP13.15□□□□□ -0.3
FAM239A-201ENST00000381108 MCMDC2Q4G0Z9 681 aa13.15□□□□□ -0.3
FAM239A-201ENST00000381108 IQSEC3Q9UPP2 1182 aaPredicted RBP13.15□□□□□ -0.3
FAM239A-201ENST00000381108 SNX14Q9Y5W7 946 aa13.15□□□□□ -0.3
FAM239A-201ENST00000381108 MYH7P12883 1935 aa13.15□□□□□ -0.3
FAM239A-201ENST00000381108 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
FAM239A-201ENST00000381108 HSP90AA1P07900 732 aaKnown RBP13.14□□□□□ -0.31
FAM239A-201ENST00000381108 UQCRFS1P1P0C7P4 283 aa13.14□□□□□ -0.31
FAM239A-201ENST00000381108 RASGRF1Q13972 1273 aa13.14□□□□□ -0.31
FAM239A-201ENST00000381108 RPGRQ92834 1020 aaKnown RBP13.14□□□□□ -0.31
FAM239A-201ENST00000381108 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
FAM239A-201ENST00000381108 PNPLA7Q6ZV29 1317 aa13.14□□□□□ -0.31
FAM239A-201ENST00000381108 IDH1O75874 414 aaKnown RBP13.14□□□□□ -0.31
FAM239A-201ENST00000381108 GYG1P46976 350 aa13.14□□□□□ -0.31
FAM239A-201ENST00000381108 WASHC4Q2M389 1173 aa13.14□□□□□ -0.31
FAM239A-201ENST00000381108 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
FAM239A-201ENST00000381108 NOL8Q76FK4 1167 aaKnown RBP13.14□□□□□ -0.31
FAM239A-201ENST00000381108 HMG20BQ9P0W2 317 aa13.14□□□□□ -0.31
FAM239A-201ENST00000381108 MAST3O60307 1309 aa13.13□□□□□ -0.31
FAM239A-201ENST00000381108 SPATA5Q8NB90 893 aa13.13□□□□□ -0.31
FAM239A-201ENST00000381108 MAP4K1Q92918 833 aa13.13□□□□□ -0.31
FAM239A-201ENST00000381108 ZNF512BQ96KM6 892 aaPredicted RBP13.13□□□□□ -0.31
FAM239A-201ENST00000381108 PIH1D3Q9NQM4 214 aaKnown RBP13.13□□□□□ -0.31
FAM239A-201ENST00000381108 M0R2C6 588 aa13.13□□□□□ -0.31
FAM239A-201ENST00000381108 KLRK1P26718 216 aa13.13□□□□□ -0.31
FAM239A-201ENST00000381108 GRAPQ13588 217 aa13.13□□□□□ -0.31
FAM239A-201ENST00000381108 ZMYM1Q5SVZ6 1142 aa13.13□□□□□ -0.31
FAM239A-201ENST00000381108 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
FAM239A-201ENST00000381108 UBE4AQ14139 1066 aa13.12□□□□□ -0.31
FAM239A-201ENST00000381108 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
FAM239A-201ENST00000381108 VPS53Q5VIR6 699 aa13.12□□□□□ -0.31
FAM239A-201ENST00000381108 CREB3L3Q68CJ9 461 aa13.12□□□□□ -0.31
FAM239A-201ENST00000381108 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
FAM239A-201ENST00000381108 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
FAM239A-201ENST00000381108 OSBP2Q969R2 916 aa13.12□□□□□ -0.31
FAM239A-201ENST00000381108 HELLSQ9NRZ9 838 aa13.12□□□□□ -0.31
FAM239A-201ENST00000381108 MMP10P09238 476 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 CPA1P15085 419 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 CASTP20810 708 aaKnown RBP13.11□□□□□ -0.31
FAM239A-201ENST00000381108 TTF1Q15361 905 aaPredicted RBP13.11□□□□□ -0.31
FAM239A-201ENST00000381108 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
FAM239A-201ENST00000381108 ADCK5Q3MIX3 580 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 SLC9C2Q5TAH2 1124 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.11□□□□□ -0.31
FAM239A-201ENST00000381108 ANKIB1Q9P2G1 1089 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 SLC27A2O14975 620 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 ZKSCAN1P17029 563 aaPredicted RBP13.11□□□□□ -0.31
FAM239A-201ENST00000381108 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 JAKMIP1Q96N16 626 aaKnown RBP13.11□□□□□ -0.31
FAM239A-201ENST00000381108 TAF6LQ9Y6J9 622 aa13.11□□□□□ -0.31
FAM239A-201ENST00000381108 ANKRD31Q8N7Z5 1873 aa13.1□□□□□ -0.31
FAM239A-201ENST00000381108 ZFYP08048 801 aaPredicted RBP13.1□□□□□ -0.31
FAM239A-201ENST00000381108 SF3B2Q13435 895 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms