RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 A0A087WZG4 1122 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 WIZO95785 1651 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 CAVIN2O95810 425 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 SSRP1Q08945 709 aaKnown RBP12.19□□□□□ -0.46
CLCN4-202ENST00000380833 PSMD2Q13200 908 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 TMED1Q13445 227 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 RASEFQ8IZ41 740 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 VPS41P49754 854 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 CHD1LQ86WJ1 897 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 PRPF31Q8WWY3 499 aaKnown RBP12.19□□□□□ -0.46
CLCN4-202ENST00000380833 MKL2Q9ULH7 1088 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 AKNAQ7Z591 1439 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 MICU3Q86XE3 530 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 IQCA1Q86XH1 822 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 ARMC2Q8NEN0 867 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 RASIP1Q5U651 963 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 LIMCH1Q9UPQ0 1083 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 FLIIQ13045 1269 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 DYNC1I2Q13409 638 aaKnown RBP12.18□□□□□ -0.46
CLCN4-202ENST00000380833 NME9Q86XW9 330 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 TFCP2L1Q9NZI6 479 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 VIMP08670 466 aaKnown RBP12.18□□□□□ -0.46
CLCN4-202ENST00000380833 CALM1P0DP23 149 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 CALM2P0DP24 149 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 CALM3P0DP25 149 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 MTIF2P46199 727 aaKnown RBP12.18□□□□□ -0.46
CLCN4-202ENST00000380833 WASF1Q92558 559 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 TSC22D3Q99576 134 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 CEP131Q9UPN4 1083 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 IKBKGQ9Y6K9 419 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 RUSC2Q8N2Y8 1516 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 TTC12Q9H892 705 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-202ENST00000380833 RNF216Q9NWF9 866 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-202ENST00000380833 GINS2Q9Y248 185 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 FBLN1P23142 703 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 AKAP2Q9Y2D5 859 aa12.18□□□□□ -0.46
CLCN4-202ENST00000380833 CCDC152Q4G0S7 254 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 PRR16Q569H4 304 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 KAT14Q9H8E8 782 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 FSD2A1L4K1 749 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-202ENST00000380833 NEK11Q8NG66 645 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 GCC1Q96CN9 775 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 GEMIN8Q9NWZ8 242 aaKnown RBP12.17□□□□□ -0.46
CLCN4-202ENST00000380833 KAT6BQ8WYB5 2073 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 SH3BP5O60239 455 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 TRIM68Q6AZZ1 485 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 TMEM57Q8N5G2 664 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 PLEKHH1Q9ULM0 1364 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 BAG4O95429 457 aaKnown RBP12.17□□□□□ -0.46
CLCN4-202ENST00000380833 MUM1Q2TAK8 710 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-202ENST00000380833 EHMT1Q9H9B1 1298 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 HARSP12081 509 aaKnown RBP12.17□□□□□ -0.46
CLCN4-202ENST00000380833 FNBP4Q8N3X1 1017 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-202ENST00000380833 C8orf76Q96K31 380 aa12.17□□□□□ -0.46
CLCN4-202ENST00000380833 SBNO2Q9Y2G9 1366 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 DYTNA2CJ06 578 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 FAM160A1Q05DH4 1040 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 INTS8Q75QN2 995 aaKnown RBP12.16□□□□□ -0.46
CLCN4-202ENST00000380833 CATIPQ7Z7H3 387 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 CCDC110Q8TBZ0 833 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 PAIP2BQ9ULR5 123 aaKnown RBP12.16□□□□□ -0.46
CLCN4-202ENST00000380833 ZFXP17010 805 aaPredicted RBP12.16□□□□□ -0.46
CLCN4-202ENST00000380833 MVPQ14764 893 aaKnown RBP12.16□□□□□ -0.46
CLCN4-202ENST00000380833 HLA-DOAP06340 250 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 LIG3P49916 1009 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 LDHAL6AQ6ZMR3 332 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 LRRC2Q9BYS8 371 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 GDPD2Q9HCC8 539 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 STX1AQ16623 288 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 JPH2Q9BR39 696 aaPredicted RBP12.16□□□□□ -0.46
CLCN4-202ENST00000380833 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
CLCN4-202ENST00000380833 YY1AP1Q9H869 796 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 ATG3Q9NT62 314 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 RBM27Q9P2N5 1060 aaKnown RBP12.16□□□□□ -0.46
CLCN4-202ENST00000380833 MAP3K2Q9Y2U5 619 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 NAA16Q6N069 864 aaPredicted RBP12.16□□□□□ -0.46
CLCN4-202ENST00000380833 TACO1Q9BSH4 297 aaKnown RBP12.16□□□□□ -0.46
CLCN4-202ENST00000380833 THEGQ9P2T0 379 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 A0A1W2PRG0 241 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 YEATS4O95619 227 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 KIF2CQ99661 725 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 SELENOSQ9BQE4 189 aa12.16□□□□□ -0.46
CLCN4-202ENST00000380833 IRX5P78411 483 aaPredicted RBP12.15□□□□□ -0.46
CLCN4-202ENST00000380833 ARID5AQ03989 594 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 MMS22LQ6ZRQ5 1243 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 HAUS1Q96CS2 278 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 DTNBP1Q96EV8 351 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 SLC26A6Q9BXS9 759 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 DDX19AQ9NUU7 478 aaKnown RBP12.15□□□□□ -0.46
CLCN4-202ENST00000380833 MTUS1Q9ULD2 1270 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 PPP6R1Q9UPN7 881 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 TMEM67Q5HYA8 995 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 HEATR3Q7Z4Q2 680 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 CABS1Q96KC9 395 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms