RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 HELLSQ9NRZ9 838 aa16.97■□□□□ 0.31
CLCN4-201ENST00000380829 RNF113AO15541 343 aaKnown RBP16.96■□□□□ 0.31
CLCN4-201ENST00000380829 ZAP70P43403 619 aa16.96■□□□□ 0.31
CLCN4-201ENST00000380829 ME3Q16798 604 aa16.96■□□□□ 0.31
CLCN4-201ENST00000380829 SMIM5Q71RC9 77 aa16.96■□□□□ 0.31
CLCN4-201ENST00000380829 HELBQ8NG08 1087 aaPredicted RBP16.96■□□□□ 0.31
CLCN4-201ENST00000380829 U3KPZ7 1027 aaPredicted RBP16.96■□□□□ 0.31
CLCN4-201ENST00000380829 MAST3O60307 1309 aa16.96■□□□□ 0.31
CLCN4-201ENST00000380829 SEC31BQ9NQW1 1179 aa16.96■□□□□ 0.3
CLCN4-201ENST00000380829 TPCN1Q9ULQ1 816 aa16.96■□□□□ 0.3
CLCN4-201ENST00000380829 NOL7Q9UMY1 257 aaKnown RBP16.96■□□□□ 0.3
CLCN4-201ENST00000380829 ZNF500O60304 480 aaPredicted RBP16.95■□□□□ 0.3
CLCN4-201ENST00000380829 CYP21A2P08686 494 aa16.95■□□□□ 0.3
CLCN4-201ENST00000380829 RPS6KB1P23443 525 aa16.95■□□□□ 0.3
CLCN4-201ENST00000380829 TSGA10IPQ3SY00 556 aa16.95■□□□□ 0.3
CLCN4-201ENST00000380829 FOXD4L6Q3SYB3 417 aaPredicted RBP16.95■□□□□ 0.3
CLCN4-201ENST00000380829 FOXD4L3Q6VB84 417 aaPredicted RBP16.95■□□□□ 0.3
CLCN4-201ENST00000380829 NECAB1Q8N987 351 aa16.95■□□□□ 0.3
CLCN4-201ENST00000380829 LMBRD1Q9NUN5 540 aa16.95■□□□□ 0.3
CLCN4-201ENST00000380829 CICQ96RK0 1608 aaPredicted RBP16.95■□□□□ 0.3
CLCN4-201ENST00000380829 M0R2C6 588 aa16.95■□□□□ 0.3
CLCN4-201ENST00000380829 PDE8BO95263 885 aa16.95■□□□□ 0.3
CLCN4-201ENST00000380829 ST3GAL1Q11201 340 aa16.95■□□□□ 0.3
CLCN4-201ENST00000380829 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
CLCN4-201ENST00000380829 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.95■□□□□ 0.3
CLCN4-201ENST00000380829 PRPF40AO75400 957 aaKnown RBP16.94■□□□□ 0.3
CLCN4-201ENST00000380829 NTSR2O95665 410 aa16.94■□□□□ 0.3
CLCN4-201ENST00000380829 NCLP19338 710 aaKnown RBP16.94■□□□□ 0.3
CLCN4-201ENST00000380829 MCAMP43121 646 aa16.94■□□□□ 0.3
CLCN4-201ENST00000380829 SMC3Q9UQE7 1217 aa16.94■□□□□ 0.3
CLCN4-201ENST00000380829 COL5A3P25940 1745 aaPredicted RBP16.94■□□□□ 0.3
CLCN4-201ENST00000380829 SPEF2Q9C093 1822 aa16.94■□□□□ 0.3
CLCN4-201ENST00000380829 KLHL40Q2TBA0 621 aa16.94■□□□□ 0.3
CLCN4-201ENST00000380829 CAVIN1Q6NZI2 390 aaKnown RBP16.94■□□□□ 0.3
CLCN4-201ENST00000380829 OSBP2Q969R2 916 aa16.94■□□□□ 0.3
CLCN4-201ENST00000380829 ZSCAN31Q96LW9 406 aaPredicted RBP16.94■□□□□ 0.3
CLCN4-201ENST00000380829 AK7Q96M32 723 aa16.94■□□□□ 0.3
CLCN4-201ENST00000380829 RBSNQ9H1K0 784 aa16.94■□□□□ 0.3
CLCN4-201ENST00000380829 SH2B1Q9NRF2 756 aaPredicted RBP16.94■□□□□ 0.3
CLCN4-201ENST00000380829 DYNC1I1O14576 645 aa16.93■□□□□ 0.3
CLCN4-201ENST00000380829 A0A0G2JLW4 131 aa16.92■□□□□ 0.3
CLCN4-201ENST00000380829 SNAP23O00161 211 aa16.92■□□□□ 0.3
CLCN4-201ENST00000380829 HSPD1P10809 573 aaKnown RBP16.92■□□□□ 0.3
CLCN4-201ENST00000380829 TOB2Q14106 344 aaPredicted RBP16.92■□□□□ 0.3
CLCN4-201ENST00000380829 KRT32Q14532 448 aa16.92■□□□□ 0.3
CLCN4-201ENST00000380829 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
CLCN4-201ENST00000380829 NEK1Q96PY6 1258 aa16.92■□□□□ 0.3
CLCN4-201ENST00000380829 DMTNQ08495 405 aa16.92■□□□□ 0.3
CLCN4-201ENST00000380829 MPHOSPH8Q99549 860 aa16.92■□□□□ 0.3
CLCN4-201ENST00000380829 DSCC1Q9BVC3 393 aa16.92■□□□□ 0.3
CLCN4-201ENST00000380829 ZNF652Q9Y2D9 606 aa16.92■□□□□ 0.3
CLCN4-201ENST00000380829 SPATA31A6Q5VVP1 1343 aa16.92■□□□□ 0.3
CLCN4-201ENST00000380829 GJB2P29033 226 aa16.91■□□□□ 0.3
CLCN4-201ENST00000380829 PHKA1P46020 1223 aa16.91■□□□□ 0.3
CLCN4-201ENST00000380829 STOX1Q6ZVD7 989 aa16.91■□□□□ 0.3
CLCN4-201ENST00000380829 WDR33Q9C0J8 1336 aaKnown RBP16.91■□□□□ 0.3
CLCN4-201ENST00000380829 LRP5O75197 1615 aa16.91■□□□□ 0.3
CLCN4-201ENST00000380829 SYT1P21579 422 aa16.91■□□□□ 0.3
CLCN4-201ENST00000380829 PUM3Q15397 648 aaKnown RBP16.91■□□□□ 0.3
CLCN4-201ENST00000380829 ZSCAN23Q3MJ62 389 aa16.91■□□□□ 0.3
CLCN4-201ENST00000380829 CCDC152Q4G0S7 254 aa16.91■□□□□ 0.3
CLCN4-201ENST00000380829 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
CLCN4-201ENST00000380829 TICAM2Q86XR7 235 aa16.91■□□□□ 0.3
CLCN4-201ENST00000380829 MROH5Q6ZUA9 1318 aa16.91■□□□□ 0.3
CLCN4-201ENST00000380829 DDX60Q8IY21 1712 aaKnown RBP16.9■□□□□ 0.3
CLCN4-201ENST00000380829 MEX3CQ5U5Q3 659 aaKnown RBP16.9■□□□□ 0.3
CLCN4-201ENST00000380829 CCDC102BQ68D86 513 aa16.9■□□□□ 0.3
CLCN4-201ENST00000380829 ZKSCAN5Q9Y2L8 839 aa16.9■□□□□ 0.3
CLCN4-201ENST00000380829 ABCC12Q96J65 1359 aa16.9■□□□□ 0.3
CLCN4-201ENST00000380829 ZSCAN20P17040 1043 aaPredicted RBP16.9■□□□□ 0.3
CLCN4-201ENST00000380829 STK3Q13188 491 aa16.9■□□□□ 0.3
CLCN4-201ENST00000380829 ANKRD1Q15327 319 aa16.9■□□□□ 0.3
CLCN4-201ENST00000380829 PDLIM2Q96JY6 352 aa16.9■□□□□ 0.3
CLCN4-201ENST00000380829 LRRC2Q9BYS8 371 aa16.9■□□□□ 0.3
CLCN4-201ENST00000380829 STX6O43752 255 aa16.89■□□□□ 0.29
CLCN4-201ENST00000380829 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
CLCN4-201ENST00000380829 TTLL5Q6EMB2 1281 aa16.89■□□□□ 0.29
CLCN4-201ENST00000380829 MTERF4Q7Z6M4 381 aaKnown RBP16.89■□□□□ 0.29
CLCN4-201ENST00000380829 LPIN2Q92539 896 aa16.89■□□□□ 0.29
CLCN4-201ENST00000380829 PUS7LQ9H0K6 701 aaKnown RBP16.89■□□□□ 0.29
CLCN4-201ENST00000380829 ZFYP08048 801 aaPredicted RBP16.89■□□□□ 0.29
CLCN4-201ENST00000380829 FGFR2P21802 821 aa16.89■□□□□ 0.29
CLCN4-201ENST00000380829 HS1BP3Q53T59 392 aa16.89■□□□□ 0.29
CLCN4-201ENST00000380829 SASS6Q6UVJ0 657 aa16.89■□□□□ 0.29
CLCN4-201ENST00000380829 TSC1Q92574 1164 aa16.89■□□□□ 0.29
CLCN4-201ENST00000380829 CCDC94Q9BW85 323 aaPredicted RBP16.89■□□□□ 0.29
CLCN4-201ENST00000380829 ALDH8A1Q9H2A2 487 aaPredicted RBP16.89■□□□□ 0.29
CLCN4-201ENST00000380829 BCORQ6W2J9 1755 aa16.89■□□□□ 0.29
CLCN4-201ENST00000380829 CNTNAP4Q9C0A0 1308 aa16.88■□□□□ 0.29
CLCN4-201ENST00000380829 AKAP11Q9UKA4 1901 aa16.88■□□□□ 0.29
CLCN4-201ENST00000380829 ZNF445P59923 1031 aa16.88■□□□□ 0.29
CLCN4-201ENST00000380829 ERFEQ4G0M1 354 aa16.88■□□□□ 0.29
CLCN4-201ENST00000380829 CLEC4GQ6UXB4 293 aa16.88■□□□□ 0.29
CLCN4-201ENST00000380829 Q6ZUG5 572 aa16.88■□□□□ 0.29
CLCN4-201ENST00000380829 GPT2Q8TD30 523 aa16.88■□□□□ 0.29
CLCN4-201ENST00000380829 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
CLCN4-201ENST00000380829 APPBP2Q92624 585 aa16.88■□□□□ 0.29
CLCN4-201ENST00000380829 GDPD2Q9HCC8 539 aa16.88■□□□□ 0.29
CLCN4-201ENST00000380829 PIH1D3Q9NQM4 214 aaKnown RBP16.88■□□□□ 0.29
CLCN4-201ENST00000380829 THSD7AQ9UPZ6 1657 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms