RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 ZNF280AP59817 542 aaPredicted RBP21.97■■□□□ 1.11
HMGN1-204ENST00000380749 FAM161AQ3B820 660 aa21.97■■□□□ 1.11
HMGN1-204ENST00000380749 PAPPA2Q9BXP8 1791 aa21.96■■□□□ 1.11
HMGN1-204ENST00000380749 USP17L8P0C7I0 530 aa21.96■■□□□ 1.11
HMGN1-204ENST00000380749 ITGA6P23229 1130 aa21.96■■□□□ 1.11
HMGN1-204ENST00000380749 BRPF1P55201 1214 aaPredicted RBP21.96■■□□□ 1.11
HMGN1-204ENST00000380749 NOGQ13253 232 aa21.96■■□□□ 1.11
HMGN1-204ENST00000380749 C2orf69Q8N8R5 385 aa21.96■■□□□ 1.11
HMGN1-204ENST00000380749 MPHOSPH8Q99549 860 aa21.96■■□□□ 1.11
HMGN1-204ENST00000380749 GBA2Q9HCG7 927 aaPredicted RBP21.96■■□□□ 1.11
HMGN1-204ENST00000380749 CASP7P55210 303 aa21.95■■□□□ 1.1
HMGN1-204ENST00000380749 ANKRD2Q9GZV1 360 aa21.95■■□□□ 1.1
HMGN1-204ENST00000380749 LEMD3Q9Y2U8 911 aa21.95■■□□□ 1.1
HMGN1-204ENST00000380749 MYO3BQ8WXR4 1341 aa21.94■■□□□ 1.1
HMGN1-204ENST00000380749 DLK2Q6UY11 383 aa21.94■■□□□ 1.1
HMGN1-204ENST00000380749 FAM9BQ8IZU0 186 aa21.94■■□□□ 1.1
HMGN1-204ENST00000380749 GMLQ99445 158 aa21.94■■□□□ 1.1
HMGN1-204ENST00000380749 MYOZ2Q9NPC6 264 aa21.94■■□□□ 1.1
HMGN1-204ENST00000380749 FBXW7Q969H0 707 aa21.93■■□□□ 1.1
HMGN1-204ENST00000380749 COA1Q9GZY4 146 aa21.93■■□□□ 1.1
HMGN1-204ENST00000380749 ZNF804BA4D1E1 1349 aa21.92■■□□□ 1.1
HMGN1-204ENST00000380749 ASTN2O75129 1339 aaPredicted RBP21.92■■□□□ 1.1
HMGN1-204ENST00000380749 PITPNM2Q9BZ72 1349 aa21.92■■□□□ 1.1
HMGN1-204ENST00000380749 CSF1RP07333 972 aa21.92■■□□□ 1.1
HMGN1-204ENST00000380749 KCNJ4P48050 445 aa21.92■■□□□ 1.1
HMGN1-204ENST00000380749 SCARF1Q14162 830 aa21.92■■□□□ 1.1
HMGN1-204ENST00000380749 ANGEL2Q5VTE6 544 aaKnown RBP21.92■■□□□ 1.1
HMGN1-204ENST00000380749 ANKRD18BA2A2Z9 1011 aa21.91■■□□□ 1.1
HMGN1-204ENST00000380749 STRIP1Q5VSL9 837 aa21.91■■□□□ 1.1
HMGN1-204ENST00000380749 RGMBQ6NW40 437 aa21.91■■□□□ 1.1
HMGN1-204ENST00000380749 CDCA5Q96FF9 252 aa21.91■■□□□ 1.1
HMGN1-204ENST00000380749 WTIPA6NIX2 430 aaPredicted RBP21.9■■□□□ 1.1
HMGN1-204ENST00000380749 F6X3S4 739 aa21.9■■□□□ 1.1
HMGN1-204ENST00000380749 OGFOD1Q8N543 542 aa21.9■■□□□ 1.1
HMGN1-204ENST00000380749 SPINK5Q9NQ38 1064 aaPredicted RBP21.9■■□□□ 1.1
HMGN1-204ENST00000380749 TSKSQ9UJT2 592 aa21.9■■□□□ 1.1
HMGN1-204ENST00000380749 CHMP3Q9Y3E7 222 aa21.9■■□□□ 1.1
HMGN1-204ENST00000380749 DACT2Q5SW24 774 aa21.89■■□□□ 1.1
HMGN1-204ENST00000380749 CCDC102AQ96A19 550 aa21.89■■□□□ 1.1
HMGN1-204ENST00000380749 ZNF157P51786 506 aaPredicted RBP21.88■■□□□ 1.09
HMGN1-204ENST00000380749 CHRNDQ07001 517 aa21.88■■□□□ 1.09
HMGN1-204ENST00000380749 IFIT5Q13325 482 aaKnown RBP21.88■■□□□ 1.09
HMGN1-204ENST00000380749 BEND3Q5T5X7 828 aa21.88■■□□□ 1.09
HMGN1-204ENST00000380749 MMP14P50281 582 aa21.87■■□□□ 1.09
HMGN1-204ENST00000380749 TXNRD3Q86VQ6 643 aa21.87■■□□□ 1.09
HMGN1-204ENST00000380749 GRM8O00222 908 aa21.87■■□□□ 1.09
HMGN1-204ENST00000380749 ARAP2Q8WZ64 1704 aa21.86■■□□□ 1.09
HMGN1-204ENST00000380749 FAM155AB1AL88 458 aaPredicted RBP21.86■■□□□ 1.09
HMGN1-204ENST00000380749 KLRK1P26718 216 aa21.86■■□□□ 1.09
HMGN1-204ENST00000380749 FKBP1BP68106 108 aa21.86■■□□□ 1.09
HMGN1-204ENST00000380749 ABHD8Q96I13 439 aa21.86■■□□□ 1.09
HMGN1-204ENST00000380749 MXD3Q9BW11 206 aa21.86■■□□□ 1.09
HMGN1-204ENST00000380749 FOXO4P98177 505 aa21.85■■□□□ 1.09
HMGN1-204ENST00000380749 TTLL5Q6EMB2 1281 aa21.85■■□□□ 1.09
HMGN1-204ENST00000380749 ZIC5Q96T25 663 aa21.85■■□□□ 1.09
HMGN1-204ENST00000380749 C9orf78Q9NZ63 289 aaPredicted RBP21.85■■□□□ 1.09
HMGN1-204ENST00000380749 HDAC9Q9UKV0 1011 aa21.85■■□□□ 1.09
HMGN1-204ENST00000380749 SLC10A3P09131 477 aa21.84■■□□□ 1.09
HMGN1-204ENST00000380749 CCDC57Q2TAC2 916 aa21.84■■□□□ 1.09
HMGN1-204ENST00000380749 NBPF9Q3BBW0 867 aa21.84■■□□□ 1.09
HMGN1-204ENST00000380749 TAF7LQ5H9L4 462 aa21.84■■□□□ 1.09
HMGN1-204ENST00000380749 ALDH1L1O75891 902 aa21.83■■□□□ 1.08
HMGN1-204ENST00000380749 GTF2IP78347 998 aa21.83■■□□□ 1.08
HMGN1-204ENST00000380749 SLC4A10Q6U841 1118 aa21.83■■□□□ 1.08
HMGN1-204ENST00000380749 LMBR1LQ6UX01 489 aa21.83■■□□□ 1.08
HMGN1-204ENST00000380749 SRCIN1Q9C0H9 1055 aa21.83■■□□□ 1.08
HMGN1-204ENST00000380749 WNT10BO00744 389 aa21.82■■□□□ 1.08
HMGN1-204ENST00000380749 KIF23Q02241 960 aaPredicted RBP21.82■■□□□ 1.08
HMGN1-204ENST00000380749 ZNF804AQ7Z570 1209 aa21.82■■□□□ 1.08
HMGN1-204ENST00000380749 KIAA0825Q8IV33 1275 aa21.82■■□□□ 1.08
HMGN1-204ENST00000380749 CD209Q9NNX6 404 aa21.82■■□□□ 1.08
HMGN1-204ENST00000380749 SAGE1Q9NXZ1 904 aa21.82■■□□□ 1.08
HMGN1-204ENST00000380749 MYH13Q9UKX3 1938 aa21.82■■□□□ 1.08
HMGN1-204ENST00000380749 COL1A1P02452 1464 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-204ENST00000380749 TAF5LO75529 589 aa21.81■■□□□ 1.08
HMGN1-204ENST00000380749 SASH1O94885 1247 aa21.81■■□□□ 1.08
HMGN1-204ENST00000380749 NF2P35240 595 aa21.81■■□□□ 1.08
HMGN1-204ENST00000380749 C15orf52Q6ZUT6 534 aaKnown RBP21.81■■□□□ 1.08
HMGN1-204ENST00000380749 APOBEC3FQ8IUX4 373 aaKnown RBP21.81■■□□□ 1.08
HMGN1-204ENST00000380749 ZNF521Q96K83 1311 aa21.81■■□□□ 1.08
HMGN1-204ENST00000380749 RASAL3Q86YV0 1011 aa21.8■■□□□ 1.08
HMGN1-204ENST00000380749 HELBQ8NG08 1087 aaPredicted RBP21.8■■□□□ 1.08
HMGN1-204ENST00000380749 CNNM1Q9NRU3 951 aa21.8■■□□□ 1.08
HMGN1-204ENST00000380749 IRS2Q9Y4H2 1338 aa21.8■■□□□ 1.08
HMGN1-204ENST00000380749 EPHA10Q5JZY3 1008 aa21.79■■□□□ 1.08
HMGN1-204ENST00000380749 LDHAL6AQ6ZMR3 332 aa21.79■■□□□ 1.08
HMGN1-204ENST00000380749 REM2Q8IYK8 340 aaPredicted RBP21.79■■□□□ 1.08
HMGN1-204ENST00000380749 SCAF8Q9UPN6 1271 aaKnown RBP21.79■■□□□ 1.08
HMGN1-204ENST00000380749 SNAP23O00161 211 aa21.78■■□□□ 1.08
HMGN1-204ENST00000380749 TTLL12Q14166 644 aaPredicted RBP21.78■■□□□ 1.08
HMGN1-204ENST00000380749 ZNF594Q96JF6 807 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-204ENST00000380749 IL1R1P14778 569 aa21.76■■□□□ 1.07
HMGN1-204ENST00000380749 LAMB1P07942 1786 aa21.76■■□□□ 1.07
HMGN1-204ENST00000380749 E9PSI1 815 aa21.75■■□□□ 1.07
HMGN1-204ENST00000380749 PLIN1O60240 522 aa21.75■■□□□ 1.07
HMGN1-204ENST00000380749 PTPRCP08575 1304 aa21.75■■□□□ 1.07
HMGN1-204ENST00000380749 DLGAP5Q15398 846 aa21.75■■□□□ 1.07
HMGN1-204ENST00000380749 PRAMEF18Q5VWM3 479 aa21.75■■□□□ 1.07
HMGN1-204ENST00000380749 RNF186Q9NXI6 227 aa21.75■■□□□ 1.07
HMGN1-204ENST00000380749 PDE4DIPQ5VU43 2346 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms