RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 LTBP3Q9NS15 1303 aa23.17■■□□□ 1.3
SMN2-202ENST00000380742 FPGT-TNNI3KV9GXZ4 949 aa23.17■■□□□ 1.3
SMN2-202ENST00000380742 A0A1B0GUL7 405 aa23.16■■□□□ 1.3
SMN2-202ENST00000380742 PRELPP51888 382 aa23.16■■□□□ 1.3
SMN2-202ENST00000380742 LPIN2Q92539 896 aa23.16■■□□□ 1.3
SMN2-202ENST00000380742 EAF2Q96CJ1 260 aaPredicted RBP23.16■■□□□ 1.3
SMN2-202ENST00000380742 ZNF277Q9NRM2 450 aaPredicted RBP23.16■■□□□ 1.3
SMN2-202ENST00000380742 MED23Q9ULK4 1368 aa23.16■■□□□ 1.3
SMN2-202ENST00000380742 CHD4Q14839 1912 aa23.15■■□□□ 1.3
SMN2-202ENST00000380742 RIMBP2O15034 1052 aa23.15■■□□□ 1.3
SMN2-202ENST00000380742 ANKRD45Q5TZF3 282 aa23.15■■□□□ 1.3
SMN2-202ENST00000380742 BCL11AQ9H165 835 aa23.15■■□□□ 1.3
SMN2-202ENST00000380742 GRIN3BO60391 1043 aa23.14■■□□□ 1.3
SMN2-202ENST00000380742 SLC5A1P13866 664 aa23.14■■□□□ 1.3
SMN2-202ENST00000380742 ADORA1P30542 326 aa23.14■■□□□ 1.3
SMN2-202ENST00000380742 WASHC4Q2M389 1173 aa23.14■■□□□ 1.3
SMN2-202ENST00000380742 C15orf52Q6ZUT6 534 aaKnown RBP23.14■■□□□ 1.3
SMN2-202ENST00000380742 CLASRPQ8N2M8 674 aaKnown RBP23.14■■□□□ 1.3
SMN2-202ENST00000380742 NEUROD6Q96NK8 337 aa23.14■■□□□ 1.3
SMN2-202ENST00000380742 EYA3Q99504 573 aa23.14■■□□□ 1.3
SMN2-202ENST00000380742 COL4A5P29400 1685 aa23.14■■□□□ 1.3
SMN2-202ENST00000380742 MYH13Q9UKX3 1938 aa23.14■■□□□ 1.29
SMN2-202ENST00000380742 IFIT1P09914 478 aaKnown RBP23.14■■□□□ 1.29
SMN2-202ENST00000380742 AOC3Q16853 763 aa23.14■■□□□ 1.29
SMN2-202ENST00000380742 CENPQQ7L2Z9 268 aaPredicted RBP23.14■■□□□ 1.29
SMN2-202ENST00000380742 ZC3H12CQ9C0D7 883 aaKnown RBP23.14■■□□□ 1.29
SMN2-202ENST00000380742 CCDC8Q9H0W5 538 aaPredicted RBP23.14■■□□□ 1.29
SMN2-202ENST00000380742 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
SMN2-202ENST00000380742 IARSP41252 1262 aaKnown RBP23.13■■□□□ 1.29
SMN2-202ENST00000380742 NUCB1Q02818 461 aa23.13■■□□□ 1.29
SMN2-202ENST00000380742 KIAA2012Q0VF49 1180 aa23.13■■□□□ 1.29
SMN2-202ENST00000380742 AACSQ86V21 672 aa23.13■■□□□ 1.29
SMN2-202ENST00000380742 XAGE2Q96GT9 111 aa23.13■■□□□ 1.29
SMN2-202ENST00000380742 TLR7Q9NYK1 1049 aaKnown RBP23.13■■□□□ 1.29
SMN2-202ENST00000380742 PPIP5K2O43314 1243 aa23.12■■□□□ 1.29
SMN2-202ENST00000380742 GYG1P46976 350 aa23.12■■□□□ 1.29
SMN2-202ENST00000380742 FAM84BQ96KN1 310 aaPredicted RBP23.12■■□□□ 1.29
SMN2-202ENST00000380742 DBNDD2Q9BQY9 259 aa23.12■■□□□ 1.29
SMN2-202ENST00000380742 VPS33BQ9H267 617 aa23.12■■□□□ 1.29
SMN2-202ENST00000380742 DBNLQ9UJU6 430 aaKnown RBP23.12■■□□□ 1.29
SMN2-202ENST00000380742 C16orf71Q8IYS4 520 aaPredicted RBP23.11■■□□□ 1.29
SMN2-202ENST00000380742 LNPKQ9C0E8 428 aa23.11■■□□□ 1.29
SMN2-202ENST00000380742 SCN9AQ15858 1988 aa23.1■■□□□ 1.29
SMN2-202ENST00000380742 FBXO33Q7Z6M2 555 aa23.1■■□□□ 1.29
SMN2-202ENST00000380742 CHD1LQ86WJ1 897 aa23.1■■□□□ 1.29
SMN2-202ENST00000380742 TIAM2Q8IVF5 1701 aa23.09■■□□□ 1.29
SMN2-202ENST00000380742 IFIT2P09913 472 aaKnown RBP23.09■■□□□ 1.29
SMN2-202ENST00000380742 LMNB1P20700 586 aa23.09■■□□□ 1.29
SMN2-202ENST00000380742 BCAMP50895 628 aa23.09■■□□□ 1.29
SMN2-202ENST00000380742 DOK7Q18PE1 504 aa23.09■■□□□ 1.29
SMN2-202ENST00000380742 LARGE2Q8N3Y3 721 aa23.09■■□□□ 1.29
SMN2-202ENST00000380742 ZBTB47Q9UFB7 747 aaPredicted RBP23.09■■□□□ 1.29
SMN2-202ENST00000380742 PSME4Q14997 1843 aa23.09■■□□□ 1.29
SMN2-202ENST00000380742 ZNF646O15015 1829 aaPredicted RBP23.08■■□□□ 1.29
SMN2-202ENST00000380742 AKAP11Q9UKA4 1901 aa23.08■■□□□ 1.29
SMN2-202ENST00000380742 HIBADHP31937 336 aaKnown RBP23.08■■□□□ 1.29
SMN2-202ENST00000380742 CAVIN4Q5BKX8 364 aa23.08■■□□□ 1.29
SMN2-202ENST00000380742 DCAF8L1A6NGE4 600 aa23.07■■□□□ 1.28
SMN2-202ENST00000380742 PHKA1P46020 1223 aa23.07■■□□□ 1.28
SMN2-202ENST00000380742 CCDC102BQ68D86 513 aa23.07■■□□□ 1.28
SMN2-202ENST00000380742 ZNF804AQ7Z570 1209 aa23.07■■□□□ 1.28
SMN2-202ENST00000380742 OTUD7AQ8TE49 926 aaPredicted RBP23.07■■□□□ 1.28
SMN2-202ENST00000380742 DBNDD1Q9H9R9 158 aa23.07■■□□□ 1.28
SMN2-202ENST00000380742 GORABQ5T7V8 394 aa23.06■■□□□ 1.28
SMN2-202ENST00000380742 COA1Q9GZY4 146 aa23.06■■□□□ 1.28
SMN2-202ENST00000380742 CD209Q9NNX6 404 aa23.06■■□□□ 1.28
SMN2-202ENST00000380742 ECE2O60344 883 aa23.05■■□□□ 1.28
SMN2-202ENST00000380742 SALL3Q9BXA9 1300 aa23.05■■□□□ 1.28
SMN2-202ENST00000380742 G3V3G9 751 aa23.04■■□□□ 1.28
SMN2-202ENST00000380742 IL1R1P14778 569 aa23.04■■□□□ 1.28
SMN2-202ENST00000380742 DCAF8Q5TAQ9 597 aa23.04■■□□□ 1.28
SMN2-202ENST00000380742 VPS37DQ86XT2 251 aa23.04■■□□□ 1.28
SMN2-202ENST00000380742 NIM1KQ8IY84 436 aa23.04■■□□□ 1.28
SMN2-202ENST00000380742 IQSEC3Q9UPP2 1182 aaPredicted RBP23.04■■□□□ 1.28
SMN2-202ENST00000380742 YDJCA8MPS7 323 aa23.03■■□□□ 1.28
SMN2-202ENST00000380742 PDE4AP27815 886 aa23.03■■□□□ 1.28
SMN2-202ENST00000380742 C9orf131Q5VYM1 1079 aa23.03■■□□□ 1.28
SMN2-202ENST00000380742 TDRD7Q8NHU6 1098 aaKnown RBP23.03■■□□□ 1.28
SMN2-202ENST00000380742 RNF181Q9P0P0 153 aa23.03■■□□□ 1.28
SMN2-202ENST00000380742 CCDC158Q5M9N0 1113 aa23.02■■□□□ 1.28
SMN2-202ENST00000380742 PODNQ7Z5L7 613 aa23.02■■□□□ 1.28
SMN2-202ENST00000380742 JDP2Q8WYK2 163 aa23.02■■□□□ 1.28
SMN2-202ENST00000380742 KCNQ5Q9NR82 932 aa23.02■■□□□ 1.28
SMN2-202ENST00000380742 ARID4AP29374 1257 aaPredicted RBP23.01■■□□□ 1.27
SMN2-202ENST00000380742 TTC39AQ5SRH9 613 aa23.01■■□□□ 1.27
SMN2-202ENST00000380742 ZNRF3Q9ULT6 936 aa23.01■■□□□ 1.27
SMN2-202ENST00000380742 COL1A1P02452 1464 aaPredicted RBP23.01■■□□□ 1.27
SMN2-202ENST00000380742 MYO5AQ9Y4I1 1855 aaKnown RBP23.01■■□□□ 1.27
SMN2-202ENST00000380742 SCARF1Q14162 830 aa23.01■■□□□ 1.27
SMN2-202ENST00000380742 TSHZ3Q63HK5 1081 aa23.01■■□□□ 1.27
SMN2-202ENST00000380742 SKAP1Q86WV1 359 aa23.01■■□□□ 1.27
SMN2-202ENST00000380742 GNL3LQ9NVN8 582 aaKnown RBP23.01■■□□□ 1.27
SMN2-202ENST00000380742 FZD9O00144 591 aa23■■□□□ 1.27
SMN2-202ENST00000380742 UQCRFS1P1P0C7P4 283 aa23■■□□□ 1.27
SMN2-202ENST00000380742 MX1P20591 662 aa23■■□□□ 1.27
SMN2-202ENST00000380742 ZNF512BQ96KM6 892 aaPredicted RBP23■■□□□ 1.27
SMN2-202ENST00000380742 ECHDC1Q9NTX5 307 aa23■■□□□ 1.27
SMN2-202ENST00000380742 ZBTB22O15209 634 aa22.99■■□□□ 1.27
SMN2-202ENST00000380742 MCAMP43121 646 aa22.99■■□□□ 1.27
SMN2-202ENST00000380742 RASGRF1Q13972 1273 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms