RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 KIAA2012Q0VF49 1180 aa15.63■□□□□ 0.09
SMN1-202ENST00000380707 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
SMN1-202ENST00000380707 KIF1BPQ96EK5 621 aa15.63■□□□□ 0.09
SMN1-202ENST00000380707 ZC3H12CQ9C0D7 883 aaKnown RBP15.63■□□□□ 0.09
SMN1-202ENST00000380707 IL1RAPL2Q9NP60 686 aa15.63■□□□□ 0.09
SMN1-202ENST00000380707 AKAP2Q9Y2D5 859 aa15.63■□□□□ 0.09
SMN1-202ENST00000380707 MED23Q9ULK4 1368 aa15.62■□□□□ 0.09
SMN1-202ENST00000380707 A0A1B0GUL7 405 aa15.62■□□□□ 0.09
SMN1-202ENST00000380707 SMARCA5O60264 1052 aaPredicted RBP15.62■□□□□ 0.09
SMN1-202ENST00000380707 TNNI3KQ59H18 835 aa15.62■□□□□ 0.09
SMN1-202ENST00000380707 C15orf52Q6ZUT6 534 aaKnown RBP15.62■□□□□ 0.09
SMN1-202ENST00000380707 GCC1Q96CN9 775 aa15.62■□□□□ 0.09
SMN1-202ENST00000380707 LRRCC1Q9C099 1032 aa15.62■□□□□ 0.09
SMN1-202ENST00000380707 VPS33BQ9H267 617 aa15.62■□□□□ 0.09
SMN1-202ENST00000380707 FPGT-TNNI3KV9GXZ4 949 aa15.62■□□□□ 0.09
SMN1-202ENST00000380707 COL4A5P29400 1685 aa15.62■□□□□ 0.09
SMN1-202ENST00000380707 IFIT1P09914 478 aaKnown RBP15.61■□□□□ 0.09
SMN1-202ENST00000380707 SLC5A1P13866 664 aa15.61■□□□□ 0.09
SMN1-202ENST00000380707 ADORA1P30542 326 aa15.61■□□□□ 0.09
SMN1-202ENST00000380707 DOK7Q18PE1 504 aa15.61■□□□□ 0.09
SMN1-202ENST00000380707 SMC5Q8IY18 1101 aa15.61■□□□□ 0.09
SMN1-202ENST00000380707 LARGE2Q8N3Y3 721 aa15.61■□□□□ 0.09
SMN1-202ENST00000380707 EAF2Q96CJ1 260 aaPredicted RBP15.61■□□□□ 0.09
SMN1-202ENST00000380707 NEUROD6Q96NK8 337 aa15.61■□□□□ 0.09
SMN1-202ENST00000380707 BCL11AQ9H165 835 aa15.61■□□□□ 0.09
SMN1-202ENST00000380707 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
SMN1-202ENST00000380707 GPR108Q9NPR9 543 aa15.61■□□□□ 0.09
SMN1-202ENST00000380707 SBF1O95248 1867 aa15.61■□□□□ 0.09
SMN1-202ENST00000380707 ZNF609O15014 1411 aa15.6■□□□□ 0.09
SMN1-202ENST00000380707 GYG1P46976 350 aa15.6■□□□□ 0.09
SMN1-202ENST00000380707 C9orf131Q5VYM1 1079 aa15.6■□□□□ 0.09
SMN1-202ENST00000380707 FAM84BQ96KN1 310 aaPredicted RBP15.6■□□□□ 0.09
SMN1-202ENST00000380707 BCAMP50895 628 aa15.59■□□□□ 0.09
SMN1-202ENST00000380707 B4GALNT3Q6L9W6 998 aa15.59■□□□□ 0.09
SMN1-202ENST00000380707 XAGE2Q96GT9 111 aa15.59■□□□□ 0.09
SMN1-202ENST00000380707 CCDC8Q9H0W5 538 aaPredicted RBP15.59■□□□□ 0.09
SMN1-202ENST00000380707 DBNDD1Q9H9R9 158 aa15.59■□□□□ 0.09
SMN1-202ENST00000380707 RNF181Q9P0P0 153 aa15.59■□□□□ 0.09
SMN1-202ENST00000380707 CCDC88AQ3V6T2 1871 aa15.59■□□□□ 0.09
SMN1-202ENST00000380707 ANKRD45Q5TZF3 282 aa15.58■□□□□ 0.09
SMN1-202ENST00000380707 FBXO33Q7Z6M2 555 aa15.58■□□□□ 0.09
SMN1-202ENST00000380707 AACSQ86V21 672 aa15.58■□□□□ 0.09
SMN1-202ENST00000380707 CLASRPQ8N2M8 674 aaKnown RBP15.58■□□□□ 0.09
SMN1-202ENST00000380707 JDP2Q8WYK2 163 aa15.58■□□□□ 0.09
SMN1-202ENST00000380707 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.09
SMN1-202ENST00000380707 TLR7Q9NYK1 1049 aaKnown RBP15.58■□□□□ 0.09
SMN1-202ENST00000380707 ECE2O60344 883 aa15.58■□□□□ 0.08
SMN1-202ENST00000380707 HIBADHP31937 336 aaKnown RBP15.58■□□□□ 0.08
SMN1-202ENST00000380707 CAVIN4Q5BKX8 364 aa15.58■□□□□ 0.08
SMN1-202ENST00000380707 ZNF804AQ7Z570 1209 aa15.58■□□□□ 0.08
SMN1-202ENST00000380707 NIM1KQ8IY84 436 aa15.58■□□□□ 0.08
SMN1-202ENST00000380707 DBNDD2Q9BQY9 259 aa15.58■□□□□ 0.08
SMN1-202ENST00000380707 KCNQ5Q9NR82 932 aa15.58■□□□□ 0.08
SMN1-202ENST00000380707 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
SMN1-202ENST00000380707 DBNLQ9UJU6 430 aaKnown RBP15.58■□□□□ 0.08
SMN1-202ENST00000380707 YDJCA8MPS7 323 aa15.57■□□□□ 0.08
SMN1-202ENST00000380707 G3V3G9 751 aa15.57■□□□□ 0.08
SMN1-202ENST00000380707 DCAF8Q5TAQ9 597 aa15.57■□□□□ 0.08
SMN1-202ENST00000380707 VPS37DQ86XT2 251 aa15.57■□□□□ 0.08
SMN1-202ENST00000380707 COA1Q9GZY4 146 aa15.57■□□□□ 0.08
SMN1-202ENST00000380707 CD209Q9NNX6 404 aa15.57■□□□□ 0.08
SMN1-202ENST00000380707 ZNRF3Q9ULT6 936 aa15.57■□□□□ 0.08
SMN1-202ENST00000380707 KDM2BQ8NHM5 1336 aa15.57■□□□□ 0.08
SMN1-202ENST00000380707 FZD9O00144 591 aa15.56■□□□□ 0.08
SMN1-202ENST00000380707 IL1R1P14778 569 aa15.56■□□□□ 0.08
SMN1-202ENST00000380707 PHKA1P46020 1223 aa15.56■□□□□ 0.08
SMN1-202ENST00000380707 NUCB1Q02818 461 aa15.56■□□□□ 0.08
SMN1-202ENST00000380707 CCDC102BQ68D86 513 aa15.56■□□□□ 0.08
SMN1-202ENST00000380707 PODNQ7Z5L7 613 aa15.56■□□□□ 0.08
SMN1-202ENST00000380707 C16orf71Q8IYS4 520 aaPredicted RBP15.56■□□□□ 0.08
SMN1-202ENST00000380707 ARAP2Q8WZ64 1704 aa15.55■□□□□ 0.08
SMN1-202ENST00000380707 IFIT2P09913 472 aaKnown RBP15.55■□□□□ 0.08
SMN1-202ENST00000380707 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
SMN1-202ENST00000380707 GORABQ5T7V8 394 aa15.55■□□□□ 0.08
SMN1-202ENST00000380707 IQSEC3Q9UPP2 1182 aaPredicted RBP15.55■□□□□ 0.08
SMN1-202ENST00000380707 DICER1Q9UPY3 1922 aaKnown RBP15.55■□□□□ 0.08
SMN1-202ENST00000380707 CHD1LQ86WJ1 897 aa15.54■□□□□ 0.08
SMN1-202ENST00000380707 TDRD7Q8NHU6 1098 aaKnown RBP15.54■□□□□ 0.08
SMN1-202ENST00000380707 LNPKQ9C0E8 428 aa15.54■□□□□ 0.08
SMN1-202ENST00000380707 RAD17O75943 681 aa15.53■□□□□ 0.08
SMN1-202ENST00000380707 CENPQQ7L2Z9 268 aaPredicted RBP15.53■□□□□ 0.08
SMN1-202ENST00000380707 OTUD7AQ8TE49 926 aaPredicted RBP15.53■□□□□ 0.08
SMN1-202ENST00000380707 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
SMN1-202ENST00000380707 CHD4Q14839 1912 aa15.53■□□□□ 0.08
SMN1-202ENST00000380707 SCN9AQ15858 1988 aa15.53■□□□□ 0.08
SMN1-202ENST00000380707 ZNF541Q9H0D2 1346 aa15.53■□□□□ 0.08
SMN1-202ENST00000380707 CXCL9Q07325 125 aa15.53■□□□□ 0.08
SMN1-202ENST00000380707 CCDC158Q5M9N0 1113 aa15.53■□□□□ 0.08
SMN1-202ENST00000380707 GNL3LQ9NVN8 582 aaKnown RBP15.53■□□□□ 0.08
SMN1-202ENST00000380707 JAG2Q9Y219 1238 aa15.53■□□□□ 0.08
SMN1-202ENST00000380707 TIAM2Q8IVF5 1701 aa15.52■□□□□ 0.08
SMN1-202ENST00000380707 FRAT2O75474 233 aaPredicted RBP15.52■□□□□ 0.07
SMN1-202ENST00000380707 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.07
SMN1-202ENST00000380707 ARID4AP29374 1257 aaPredicted RBP15.52■□□□□ 0.07
SMN1-202ENST00000380707 EIF6P56537 245 aaKnown RBP15.52■□□□□ 0.07
SMN1-202ENST00000380707 USP17L3A6NCW0 530 aa15.51■□□□□ 0.07
SMN1-202ENST00000380707 USP17L4A6NCW7 530 aa15.51■□□□□ 0.07
SMN1-202ENST00000380707 PSMD14O00487 310 aa15.51■□□□□ 0.07
SMN1-202ENST00000380707 GTF2IP78347 998 aa15.51■□□□□ 0.07
SMN1-202ENST00000380707 RASGRF1Q13972 1273 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms