RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 SCRN3Q0VDG4 424 aa5.4□□□□□ -1.54
PTCD2-202ENST00000380639 BICDL1Q6ZP65 573 aa5.4□□□□□ -1.54
PTCD2-202ENST00000380639 GRPEL1Q9HAV7 217 aa5.4□□□□□ -1.54
PTCD2-202ENST00000380639 ARFGAP3Q9NP61 516 aa5.4□□□□□ -1.54
PTCD2-202ENST00000380639 MCF2L2Q86YR7 1114 aa5.4□□□□□ -1.54
PTCD2-202ENST00000380639 UTP14AQ9BVJ6 771 aaKnown RBP5.4□□□□□ -1.54
PTCD2-202ENST00000380639 CCDC162PA2VCL2 907 aa5.4□□□□□ -1.54
PTCD2-202ENST00000380639 GOLGA8CPA6NN73 597 aa5.4□□□□□ -1.54
PTCD2-202ENST00000380639 WDR46O15213 610 aaKnown RBP5.4□□□□□ -1.54
PTCD2-202ENST00000380639 DAPK3O43293 454 aa5.4□□□□□ -1.54
PTCD2-202ENST00000380639 EEF1DP29692 281 aaKnown RBP5.4□□□□□ -1.54
PTCD2-202ENST00000380639 TRIM14Q14142 442 aa5.4□□□□□ -1.54
PTCD2-202ENST00000380639 CNTROBQ8N137 903 aa5.4□□□□□ -1.54
PTCD2-202ENST00000380639 RNF216Q9NWF9 866 aaPredicted RBP5.4□□□□□ -1.54
PTCD2-202ENST00000380639 G3V3G9 751 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 EVI5O60447 810 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 DCAF8Q5TAQ9 597 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 ZKSCAN2Q63HK3 967 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 ST13P4Q8IZP2 240 aaPredicted RBP5.4□□□□□ -1.55
PTCD2-202ENST00000380639 B3GALT6Q96L58 329 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 CFDP1Q9UEE9 299 aaPredicted RBP5.4□□□□□ -1.55
PTCD2-202ENST00000380639 FLOT1O75955 427 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 LARP1Q6PKG0 1096 aaKnown RBP5.4□□□□□ -1.55
PTCD2-202ENST00000380639 STX12Q86Y82 276 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 RNF10Q8N5U6 811 aaKnown RBP5.4□□□□□ -1.55
PTCD2-202ENST00000380639 CCDC155Q8N6L0 562 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 RUBCNQ92622 972 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 CEP19Q96LK0 163 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 DDIT3P35638 169 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 TMED10P49755 219 aaKnown RBP5.4□□□□□ -1.55
PTCD2-202ENST00000380639 RASIP1Q5U651 963 aa5.4□□□□□ -1.55
PTCD2-202ENST00000380639 SECISBP2LQ93073 1101 aaKnown RBP5.4□□□□□ -1.55
PTCD2-202ENST00000380639 UAP1Q16222 522 aaPredicted RBP5.4□□□□□ -1.55
PTCD2-202ENST00000380639 APOBEC2Q9Y235 224 aaKnown RBP5.4□□□□□ -1.55
PTCD2-202ENST00000380639 LOC105371045A0A1W2PR82 267 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 PCP4L1A6NKN8 68 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 SLC4A3P48751 1232 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 TSHZ2Q9NRE2 1034 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 ZNF711Q9Y462 761 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 PPME1Q9Y570 386 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 GTPBP10A4D1E9 387 aaKnown RBP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 PIP4K2BP78356 416 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 VEPH1Q14D04 833 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 NOP9Q86U38 636 aaKnown RBP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 ARHGAP24Q8N264 748 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 GPR101Q96P66 508 aaPredicted RBP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 C10orf88Q9H8K7 445 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 LZTS1Q9Y250 596 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 NBPF26B4DH59 902 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 NEMFO60524 1076 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 PSMD2Q13200 908 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 NBPF14Q5TI25 921 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 DENND2CQ68D51 928 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 NBPF15Q8N660 670 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 CSGALNACT2Q8N6G5 542 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 DDX28Q9NUL7 540 aaKnown RBP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 DBNLQ9UJU6 430 aaKnown RBP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 ATP8A1Q9Y2Q0 1164 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 STX17P56962 302 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 EVCP57679 992 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 C16orf87Q6PH81 154 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 MUM1Q2TAK8 710 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 ARL13BQ3SXY8 428 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 TEX19Q8NA77 164 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 ZNF830Q96NB3 372 aaPredicted RBP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 HAUS8Q9BT25 410 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 CCDC94Q9BW85 323 aaPredicted RBP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 NUTM2FA1L443 756 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 NXNQ6DKJ4 435 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 TBC1D31Q96DN5 1066 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 ATF3P18847 181 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 GOLGA8FQ08AF8 430 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 GOLGA8DPQ0D2H9 430 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 RCSD1Q6JBY9 416 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 ELMSAN1Q6PJG2 1045 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 CPLX2Q6PUV4 134 aaKnown RBP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 SDF4Q9BRK5 362 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 ZBED2Q9BTP6 218 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 SFMBT1Q9UHJ3 866 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 NBPF5PQ86XG9 351 aaPredicted RBP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 JMYQ8N9B5 988 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 SPATA18Q8TC71 538 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 THUMPD2Q9BTF0 503 aaKnown RBP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 SYNDIG1Q9H7V2 258 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 ATPIF1Q9UII2 106 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 ANGPT2O15123 496 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 CCND1P24385 295 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 USH1GQ495M9 461 aa5.39□□□□□ -1.55
PTCD2-202ENST00000380639 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTCD2-202ENST00000380639 GOLGA8IPA6NC78 632 aa5.38□□□□□ -1.55
PTCD2-202ENST00000380639 DMPKQ09013 629 aa5.38□□□□□ -1.55
PTCD2-202ENST00000380639 MPNDQ8N594 471 aa5.38□□□□□ -1.55
PTCD2-202ENST00000380639 ARHGEF2Q92974 986 aaKnown RBP5.38□□□□□ -1.55
PTCD2-202ENST00000380639 BHMTQ93088 406 aa5.38□□□□□ -1.55
PTCD2-202ENST00000380639 DKC1O60832 514 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTCD2-202ENST00000380639 POLR2FP61218 127 aaKnown RBP5.38□□□□□ -1.55
PTCD2-202ENST00000380639 RASAL2Q9UJF2 1139 aa5.38□□□□□ -1.55
PTCD2-202ENST00000380639 IPO5O00410 1097 aaKnown RBP5.38□□□□□ -1.55
PTCD2-202ENST00000380639 CAPN2P17655 700 aa5.38□□□□□ -1.55
PTCD2-202ENST00000380639 TAF11Q15544 211 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms