RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 IFIT1BQ5T764 474 aaKnown RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 PPIP5K1Q6PFW1 1433 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 TTC21BQ7Z4L5 1316 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 BICC1Q9H694 974 aaKnown RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 RPS6KB1P23443 525 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 TUBB4BP68371 445 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 KCNH5Q8NCM2 988 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 NRBP1Q9UHY1 535 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ZNF202O95125 648 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 HSPA4P34932 840 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 NBPF11Q86T75 865 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ZRANB1Q9UGI0 708 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 CDC42BPAQ5VT25 1732 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ERBB4Q15303 1308 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 PPP1R12BO60237 982 aaPredicted RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ARID5AQ03989 594 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 EIF4A2Q14240 407 aaKnown RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ZSCAN29Q8IWY8 852 aaPredicted RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 PAG1Q9NWQ8 432 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 GSTTP1A0A1W2PQM5 241 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 SSR1P43307 286 aaKnown RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 CKAP4Q07065 602 aaKnown RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 CAVIN4Q5BKX8 364 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 TSG101Q99816 390 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 UBA5Q9GZZ9 404 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 MAGI3Q5TCQ9 1506 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 FGFR1OPO95684 399 aaKnown RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 G2E3Q7L622 706 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 VPS36Q86VN1 386 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 EHBP1Q8NDI1 1231 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 DHX58Q96C10 678 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ZBTB3Q9H5J0 574 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 RABEP2Q9H5N1 569 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 STX8Q9UNK0 236 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 GPTP24298 496 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 MCM7P33993 719 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 CYLC1P35663 651 aaPredicted RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 MYL5Q02045 173 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 GABPB1Q06547 395 aaPredicted RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 TRMT1LQ7Z2T5 733 aaKnown RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 THEMISQ8N1K5 641 aaPredicted RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 MMRN2Q9H8L6 949 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 MACROD2A1Z1Q3 448 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ZNF76P36508 570 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ZNF75DP51815 510 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 MTHFSDQ2M296 383 aaKnown RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ANKS4BQ8N8V4 417 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 RAB34Q9BZG1 259 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 TAOK3Q9H2K8 898 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 MAPK8IP1Q9UQF2 711 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ZKSCAN3Q9BRR0 538 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 VPS16Q9H269 839 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 SLC27A2O14975 620 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 BRD1O95696 1058 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 TUBB4AP04350 444 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 IGHMBP2P38935 993 aaKnown RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 CHMP4BP1P59074 171 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ZSCAN26Q16670 478 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 CALML4Q96GE6 196 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 VAT1LQ9HCJ6 419 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 RAD50Q92878 1312 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 WDHD1O75717 1129 aaPredicted RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ADKP55263 362 aaKnown RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 KIAA0753Q2KHM9 967 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ZNF444Q8N0Y2 327 aaPredicted RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 NDUFB9Q9Y6M9 179 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 DHX32Q7L7V1 743 aaKnown RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 PAIP2Q9BPZ3 127 aaKnown RBP4.77□□□□□ -1.65
BRCA2-201ENST00000380152 ZNF287Q9HBT7 754 aa4.77□□□□□ -1.65
BRCA2-201ENST00000380152 CCDC194A0A1B0GVG4 234 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 TTF1Q15361 905 aaPredicted RBP4.76□□□□□ -1.65
BRCA2-201ENST00000380152 PPM1EQ8WY54 764 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 AKR1B15C9JRZ8 316 aaPredicted RBP4.76□□□□□ -1.65
BRCA2-201ENST00000380152 OAS2P29728 719 aaKnown RBP4.76□□□□□ -1.65
BRCA2-201ENST00000380152 KRT83P78385 493 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 ANKRD18AQ8IVF6 992 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 PSMB7Q99436 277 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 EXOC1Q9NV70 894 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 MAGI2Q86UL8 1455 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 TSPY2A6NKD2 308 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 SGSM2O43147 1006 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 IDEP14735 1019 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 CWC25Q9NXE8 425 aaPredicted RBP4.76□□□□□ -1.65
BRCA2-201ENST00000380152 A0A1B0GUL7 405 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 PRC1O43663 620 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 JAK2O60674 1132 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 WTAPQ15007 396 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 CPLX4Q7Z7G2 160 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 TRMT2AQ8IZ69 625 aaKnown RBP4.76□□□□□ -1.65
BRCA2-201ENST00000380152 NFATC2IPQ8NCF5 419 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 NCOA5Q9HCD5 579 aaKnown RBP4.76□□□□□ -1.65
BRCA2-201ENST00000380152 ZNF215Q9UL58 517 aaPredicted RBP4.76□□□□□ -1.65
BRCA2-201ENST00000380152 NSFL1CQ9UNZ2 370 aaKnown RBP4.76□□□□□ -1.65
BRCA2-201ENST00000380152 RBM5P52756 815 aaKnown RBP eCLIP4.76□□□□□ -1.65
BRCA2-201ENST00000380152 COPS6Q7L5N1 327 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 CCDC91Q7Z6B0 441 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 FAM76AQ8TAV0 307 aa4.76□□□□□ -1.65
BRCA2-201ENST00000380152 RNF41Q9H4P4 317 aaPredicted RBP4.76□□□□□ -1.65
BRCA2-201ENST00000380152 NBPF7P0C2Y1 421 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms