RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 UBAP1LF5GYI3 381 aa29.74■■■□□ 2.35
NDEL1-202ENST00000380025 ZFYP08048 801 aaPredicted RBP29.74■■■□□ 2.35
NDEL1-202ENST00000380025 PARP10Q53GL7 1025 aa29.74■■■□□ 2.35
NDEL1-202ENST00000380025 LAMB2P55268 1798 aa29.74■■■□□ 2.35
NDEL1-202ENST00000380025 FAM177BA6PVY3 158 aa29.74■■■□□ 2.35
NDEL1-202ENST00000380025 F13A1P00488 732 aa29.74■■■□□ 2.35
NDEL1-202ENST00000380025 MCAMP43121 646 aa29.74■■■□□ 2.35
NDEL1-202ENST00000380025 ZNF445P59923 1031 aa29.74■■■□□ 2.35
NDEL1-202ENST00000380025 ZSCAN23Q3MJ62 389 aa29.74■■■□□ 2.35
NDEL1-202ENST00000380025 ZNF512BQ96KM6 892 aaPredicted RBP29.74■■■□□ 2.35
NDEL1-202ENST00000380025 ARAP2Q8WZ64 1704 aa29.74■■■□□ 2.35
NDEL1-202ENST00000380025 NGLY1Q96IV0 654 aa29.73■■■□□ 2.35
NDEL1-202ENST00000380025 MTMR6Q9Y217 621 aa29.73■■■□□ 2.35
NDEL1-202ENST00000380025 MBD3O95983 291 aa29.72■■■□□ 2.35
NDEL1-202ENST00000380025 RBM27Q9P2N5 1060 aaKnown RBP29.72■■■□□ 2.35
NDEL1-202ENST00000380025 MROH5Q6ZUA9 1318 aa29.71■■■□□ 2.35
NDEL1-202ENST00000380025 A0A0G2JLW4 131 aa29.71■■■□□ 2.35
NDEL1-202ENST00000380025 NTSR2O95665 410 aa29.71■■■□□ 2.35
NDEL1-202ENST00000380025 Q6ZUG5 572 aa29.71■■■□□ 2.35
NDEL1-202ENST00000380025 GDPD2Q9HCC8 539 aa29.71■■■□□ 2.35
NDEL1-202ENST00000380025 NIP7Q9Y221 180 aaKnown RBP eCLIP29.71■■■□□ 2.35
NDEL1-202ENST00000380025 TMEM87AQ8NBN3 555 aa29.7■■■□□ 2.34
NDEL1-202ENST00000380025 TMEM63CQ9P1W3 806 aa29.7■■■□□ 2.34
NDEL1-202ENST00000380025 HMGB1P09429 215 aaKnown RBP29.69■■■□□ 2.34
NDEL1-202ENST00000380025 FGFR2P21802 821 aa29.69■■■□□ 2.34
NDEL1-202ENST00000380025 WASHC4Q2M389 1173 aa29.69■■■□□ 2.34
NDEL1-202ENST00000380025 APPBP2Q92624 585 aa29.69■■■□□ 2.34
NDEL1-202ENST00000380025 FOXP2O15409 715 aa29.69■■■□□ 2.34
NDEL1-202ENST00000380025 PUM3Q15397 648 aaKnown RBP29.69■■■□□ 2.34
NDEL1-202ENST00000380025 USP48Q86UV5 1035 aa29.69■■■□□ 2.34
NDEL1-202ENST00000380025 LINC00116Q8NCU8 138 aa29.69■■■□□ 2.34
NDEL1-202ENST00000380025 STK3Q13188 491 aa29.68■■■□□ 2.34
NDEL1-202ENST00000380025 SEC31BQ9NQW1 1179 aa29.68■■■□□ 2.34
NDEL1-202ENST00000380025 CCDC102BQ68D86 513 aa29.67■■■□□ 2.34
NDEL1-202ENST00000380025 HELBQ8NG08 1087 aaPredicted RBP29.67■■■□□ 2.34
NDEL1-202ENST00000380025 LPIN2Q92539 896 aa29.67■■■□□ 2.34
NDEL1-202ENST00000380025 CNPY2Q9Y2B0 182 aa29.67■■■□□ 2.34
NDEL1-202ENST00000380025 MYO5AQ9Y4I1 1855 aaKnown RBP29.67■■■□□ 2.34
NDEL1-202ENST00000380025 E7EWF7 191 aa29.67■■■□□ 2.34
NDEL1-202ENST00000380025 ARID4AP29374 1257 aaPredicted RBP29.67■■■□□ 2.34
NDEL1-202ENST00000380025 PHKA1P46020 1223 aa29.67■■■□□ 2.34
NDEL1-202ENST00000380025 DHX32Q7L7V1 743 aaKnown RBP29.67■■■□□ 2.34
NDEL1-202ENST00000380025 GTF3C6Q969F1 213 aa29.67■■■□□ 2.34
NDEL1-202ENST00000380025 PUS7LQ9H0K6 701 aaKnown RBP29.67■■■□□ 2.34
NDEL1-202ENST00000380025 ATP6V1DQ9Y5K8 247 aa29.67■■■□□ 2.34
NDEL1-202ENST00000380025 RTL9Q8NET4 1388 aa29.66■■■□□ 2.34
NDEL1-202ENST00000380025 FNBP4Q8N3X1 1017 aaPredicted RBP29.66■■■□□ 2.34
NDEL1-202ENST00000380025 GADD45BO75293 160 aaPredicted RBP29.66■■■□□ 2.34
NDEL1-202ENST00000380025 TTLL5Q6EMB2 1281 aa29.66■■■□□ 2.34
NDEL1-202ENST00000380025 LRRC2Q9BYS8 371 aa29.66■■■□□ 2.34
NDEL1-202ENST00000380025 ZNF652Q9Y2D9 606 aa29.66■■■□□ 2.34
NDEL1-202ENST00000380025 CCDC152Q4G0S7 254 aa29.65■■■□□ 2.34
NDEL1-202ENST00000380025 LARP1BQ659C4 914 aaKnown RBP29.65■■■□□ 2.34
NDEL1-202ENST00000380025 VPS37CA5D8V6 355 aaPredicted RBP29.64■■■□□ 2.34
NDEL1-202ENST00000380025 EXOSC10Q01780 885 aaKnown RBP29.64■■■□□ 2.34
NDEL1-202ENST00000380025 BRF1Q92994 677 aa29.64■■■□□ 2.34
NDEL1-202ENST00000380025 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.64■■■□□ 2.341e-7■□□□□ 10.8
NDEL1-202ENST00000380025 PDIA4P13667 645 aaKnown RBP29.64■■■□□ 2.34
NDEL1-202ENST00000380025 TTF1Q15361 905 aaPredicted RBP29.64■■■□□ 2.34
NDEL1-202ENST00000380025 MPHOSPH8Q99549 860 aa29.64■■■□□ 2.34
NDEL1-202ENST00000380025 PIH1D3Q9NQM4 214 aaKnown RBP29.63■■■□□ 2.33
NDEL1-202ENST00000380025 UQCRFS1P1P0C7P4 283 aa29.63■■■□□ 2.33
NDEL1-202ENST00000380025 HSP90B1P14625 803 aaKnown RBP29.63■■■□□ 2.33
NDEL1-202ENST00000380025 PDCP20941 246 aa29.63■■■□□ 2.33
NDEL1-202ENST00000380025 ADD2P35612 726 aa29.63■■■□□ 2.33
NDEL1-202ENST00000380025 CLEC4GQ6UXB4 293 aa29.63■■■□□ 2.33
NDEL1-202ENST00000380025 PTF1AQ7RTS3 328 aa29.63■■■□□ 2.33
NDEL1-202ENST00000380025 AGXT2Q9BYV1 514 aa29.63■■■□□ 2.33
NDEL1-202ENST00000380025 ATRNO75882 1429 aa29.62■■■□□ 2.33
NDEL1-202ENST00000380025 KCNQ4P56696 695 aa29.62■■■□□ 2.33
NDEL1-202ENST00000380025 CTNNA3Q9UI47 895 aa29.62■■■□□ 2.33
NDEL1-202ENST00000380025 THSD7AQ9UPZ6 1657 aa29.62■■■□□ 2.33
NDEL1-202ENST00000380025 ZSCAN25Q6NSZ9 544 aa29.62■■■□□ 2.33
NDEL1-202ENST00000380025 GPAA1O43292 621 aa29.61■■■□□ 2.33
NDEL1-202ENST00000380025 SLC5A1P13866 664 aa29.61■■■□□ 2.33
NDEL1-202ENST00000380025 CNTNAP4Q9C0A0 1308 aa29.61■■■□□ 2.33
NDEL1-202ENST00000380025 BTAF1O14981 1849 aa29.61■■■□□ 2.33
NDEL1-202ENST00000380025 FGD1P98174 961 aa29.6■■■□□ 2.33
NDEL1-202ENST00000380025 CDC37L1Q7L3B6 337 aa29.6■■■□□ 2.33
NDEL1-202ENST00000380025 COL4A1P02462 1669 aa29.6■■■□□ 2.33
NDEL1-202ENST00000380025 SCN7AQ01118 1682 aa29.6■■■□□ 2.33
NDEL1-202ENST00000380025 FGAP02671 866 aa29.6■■■□□ 2.33
NDEL1-202ENST00000380025 SLC9C2Q5TAH2 1124 aa29.6■■■□□ 2.33
NDEL1-202ENST00000380025 SNAP23O00161 211 aa29.59■■■□□ 2.33
NDEL1-202ENST00000380025 DNM1Q05193 864 aaKnown RBP29.59■■■□□ 2.33
NDEL1-202ENST00000380025 JAK2O60674 1132 aa29.59■■■□□ 2.33
NDEL1-202ENST00000380025 SCRN1Q12765 414 aa29.59■■■□□ 2.33
NDEL1-202ENST00000380025 CASZ1Q86V15 1759 aa29.59■■■□□ 2.33
NDEL1-202ENST00000380025 DOCK2Q92608 1830 aa29.58■■■□□ 2.33
NDEL1-202ENST00000380025 PFKFB2O60825 505 aa29.58■■■□□ 2.33
NDEL1-202ENST00000380025 IGHMBP2P38935 993 aaKnown RBP29.58■■■□□ 2.33
NDEL1-202ENST00000380025 IMMTQ16891 758 aaKnown RBP29.58■■■□□ 2.33
NDEL1-202ENST00000380025 NHSQ6T4R5 1651 aa29.58■■■□□ 2.33
NDEL1-202ENST00000380025 SYCE3A1L190 88 aa29.57■■■□□ 2.32
NDEL1-202ENST00000380025 IDH1O75874 414 aaKnown RBP29.57■■■□□ 2.32
NDEL1-202ENST00000380025 UBE3CQ15386 1083 aa29.57■■■□□ 2.32
NDEL1-202ENST00000380025 USP21Q9UK80 565 aa29.57■■■□□ 2.32
NDEL1-202ENST00000380025 FIBPO43427 364 aa29.57■■■□□ 2.32
NDEL1-202ENST00000380025 APOBRQ0VD83 1088 aa29.57■■■□□ 2.32
NDEL1-202ENST00000380025 HAND2P61296 217 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms