RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 CHD1LQ86WJ1 897 aa30.08■■■□□ 2.41
TM6SF1-204ENST00000379390 LPIN2Q92539 896 aa30.08■■■□□ 2.41
TM6SF1-204ENST00000379390 TLR7Q9NYK1 1049 aaKnown RBP30.08■■■□□ 2.41
TM6SF1-204ENST00000379390 SBF1O95248 1867 aa30.08■■■□□ 2.41
TM6SF1-204ENST00000379390 SLC5A1P13866 664 aa30.07■■■□□ 2.4
TM6SF1-204ENST00000379390 GRIPAP1Q4V328 841 aa30.07■■■□□ 2.4
TM6SF1-204ENST00000379390 CCDC8Q9H0W5 538 aaPredicted RBP30.07■■■□□ 2.4
TM6SF1-204ENST00000379390 NFKBIEO00221 500 aa30.07■■■□□ 2.4
TM6SF1-204ENST00000379390 ADORA1P30542 326 aa30.07■■■□□ 2.4
TM6SF1-204ENST00000379390 IFIT1P09914 478 aaKnown RBP30.06■■■□□ 2.4
TM6SF1-204ENST00000379390 RTFDC1Q9BY42 306 aaPredicted RBP30.06■■■□□ 2.4
TM6SF1-204ENST00000379390 FKBP4Q02790 459 aaKnown RBP eCLIP30.05■■■□□ 2.4
TM6SF1-204ENST00000379390 GPR162Q16538 588 aa30.05■■■□□ 2.4
TM6SF1-204ENST00000379390 TXNRD3Q86VQ6 643 aa30.05■■■□□ 2.4
TM6SF1-204ENST00000379390 C16orf71Q8IYS4 520 aaPredicted RBP30.05■■■□□ 2.4
TM6SF1-204ENST00000379390 PSMD1Q99460 953 aa30.05■■■□□ 2.4
TM6SF1-204ENST00000379390 DBNLQ9UJU6 430 aaKnown RBP30.05■■■□□ 2.4
TM6SF1-204ENST00000379390 CHD4Q14839 1912 aa30.05■■■□□ 2.4
TM6SF1-204ENST00000379390 IFIT2P09913 472 aaKnown RBP30.04■■■□□ 2.4
TM6SF1-204ENST00000379390 RASSF7Q02833 373 aa30.04■■■□□ 2.4
TM6SF1-204ENST00000379390 OTUD7AQ8TE49 926 aaPredicted RBP30.04■■■□□ 2.4
TM6SF1-204ENST00000379390 DBNDD2Q9BQY9 259 aa30.04■■■□□ 2.4
TM6SF1-204ENST00000379390 TAOK3Q9H2K8 898 aa30.04■■■□□ 2.4
TM6SF1-204ENST00000379390 IRS2Q9Y4H2 1338 aa30.04■■■□□ 2.4
TM6SF1-204ENST00000379390 RIMBP2O15034 1052 aa30.04■■■□□ 2.4
TM6SF1-204ENST00000379390 ARHGAP27Q6ZUM4 889 aa30.04■■■□□ 2.4
TM6SF1-204ENST00000379390 XAGE2Q96GT9 111 aa30.04■■■□□ 2.4
TM6SF1-204ENST00000379390 MED23Q9ULK4 1368 aa30.03■■■□□ 2.4
TM6SF1-204ENST00000379390 ZNF277Q9NRM2 450 aaPredicted RBP30.03■■■□□ 2.4
TM6SF1-204ENST00000379390 GYG1P46976 350 aa30.02■■■□□ 2.4
TM6SF1-204ENST00000379390 WASHC4Q2M389 1173 aa30.02■■■□□ 2.4
TM6SF1-204ENST00000379390 SKAP1Q86WV1 359 aa30.02■■■□□ 2.4
TM6SF1-204ENST00000379390 SUPT20HQ8NEM7 779 aa30.02■■■□□ 2.4
TM6SF1-204ENST00000379390 DICER1Q9UPY3 1922 aaKnown RBP30.02■■■□□ 2.4
TM6SF1-204ENST00000379390 EYA3Q99504 573 aa30.01■■■□□ 2.39
TM6SF1-204ENST00000379390 AOC3Q16853 763 aa30■■■□□ 2.39
TM6SF1-204ENST00000379390 LTBP3Q9NS15 1303 aa30■■■□□ 2.39
TM6SF1-204ENST00000379390 GORABQ5T7V8 394 aa30■■■□□ 2.39
TM6SF1-204ENST00000379390 ZC3H12CQ9C0D7 883 aaKnown RBP30■■■□□ 2.39
TM6SF1-204ENST00000379390 COL4A5P29400 1685 aa29.99■■■□□ 2.39
TM6SF1-204ENST00000379390 PPIP5K2O43314 1243 aa29.99■■■□□ 2.39
TM6SF1-204ENST00000379390 BCAMP50895 628 aa29.99■■■□□ 2.39
TM6SF1-204ENST00000379390 C15orf52Q6ZUT6 534 aaKnown RBP29.99■■■□□ 2.39
TM6SF1-204ENST00000379390 AKAP11Q9UKA4 1901 aa29.99■■■□□ 2.39
TM6SF1-204ENST00000379390 SCN9AQ15858 1988 aa29.98■■■□□ 2.39
TM6SF1-204ENST00000379390 PDE4AP27815 886 aa29.98■■■□□ 2.39
TM6SF1-204ENST00000379390 PHKA1P46020 1223 aa29.98■■■□□ 2.39
TM6SF1-204ENST00000379390 FAM84BQ96KN1 310 aaPredicted RBP29.98■■■□□ 2.39
TM6SF1-204ENST00000379390 CAVIN4Q5BKX8 364 aa29.97■■■□□ 2.39
TM6SF1-204ENST00000379390 TSHZ3Q63HK5 1081 aa29.97■■■□□ 2.39
TM6SF1-204ENST00000379390 KIAA2012Q0VF49 1180 aa29.96■■■□□ 2.39
TM6SF1-204ENST00000379390 CCDC102BQ68D86 513 aa29.96■■■□□ 2.39
TM6SF1-204ENST00000379390 VPS37DQ86XT2 251 aa29.96■■■□□ 2.39
TM6SF1-204ENST00000379390 SALL3Q9BXA9 1300 aa29.96■■■□□ 2.39
TM6SF1-204ENST00000379390 IARSP41252 1262 aaKnown RBP29.96■■■□□ 2.39
TM6SF1-204ENST00000379390 PRELPP51888 382 aa29.96■■■□□ 2.39
TM6SF1-204ENST00000379390 HIBADHP31937 336 aaKnown RBP29.95■■■□□ 2.38
TM6SF1-204ENST00000379390 DOK7Q18PE1 504 aa29.95■■■□□ 2.38
TM6SF1-204ENST00000379390 ZNF804AQ7Z570 1209 aa29.95■■■□□ 2.38
TM6SF1-204ENST00000379390 IQSEC3Q9UPP2 1182 aaPredicted RBP29.95■■■□□ 2.38
TM6SF1-204ENST00000379390 TIAM2Q8IVF5 1701 aa29.95■■■□□ 2.38
TM6SF1-204ENST00000379390 MX1P20591 662 aa29.94■■■□□ 2.38
TM6SF1-204ENST00000379390 FBXO33Q7Z6M2 555 aa29.94■■■□□ 2.38
TM6SF1-204ENST00000379390 LARGE2Q8N3Y3 721 aa29.94■■■□□ 2.38
TM6SF1-204ENST00000379390 DBNDD1Q9H9R9 158 aa29.94■■■□□ 2.38
TM6SF1-204ENST00000379390 PSME4Q14997 1843 aa29.94■■■□□ 2.38
TM6SF1-204ENST00000379390 CCDC158Q5M9N0 1113 aa29.93■■■□□ 2.38
TM6SF1-204ENST00000379390 TTC39AQ5SRH9 613 aa29.93■■■□□ 2.38
TM6SF1-204ENST00000379390 ZNF646O15015 1829 aaPredicted RBP29.92■■■□□ 2.38
TM6SF1-204ENST00000379390 G3V3G9 751 aa29.92■■■□□ 2.38
TM6SF1-204ENST00000379390 DCAF8Q5TAQ9 597 aa29.92■■■□□ 2.38
TM6SF1-204ENST00000379390 PLEKHM2Q8IWE5 1019 aa29.92■■■□□ 2.38
TM6SF1-204ENST00000379390 GPATCH3Q96I76 525 aa29.92■■■□□ 2.38
TM6SF1-204ENST00000379390 MYO5AQ9Y4I1 1855 aaKnown RBP29.92■■■□□ 2.38
TM6SF1-204ENST00000379390 GRIN3BO60391 1043 aa29.91■■■□□ 2.38
TM6SF1-204ENST00000379390 CD209Q9NNX6 404 aa29.91■■■□□ 2.38
TM6SF1-204ENST00000379390 ECHDC1Q9NTX5 307 aa29.91■■■□□ 2.38
TM6SF1-204ENST00000379390 AK9Q5TCS8 1911 aa29.9■■■□□ 2.38
TM6SF1-204ENST00000379390 PDE1AP54750 535 aa29.9■■■□□ 2.38
TM6SF1-204ENST00000379390 COA1Q9GZY4 146 aa29.9■■■□□ 2.38
TM6SF1-204ENST00000379390 VPS33BQ9H267 617 aa29.9■■■□□ 2.38
TM6SF1-204ENST00000379390 COL1A1P02452 1464 aaPredicted RBP29.9■■■□□ 2.38
TM6SF1-204ENST00000379390 ECE2O60344 883 aa29.89■■■□□ 2.38
TM6SF1-204ENST00000379390 RGS3P49796 1198 aa29.89■■■□□ 2.38
TM6SF1-204ENST00000379390 SCARF1Q14162 830 aa29.89■■■□□ 2.38
TM6SF1-204ENST00000379390 LMNB1P20700 586 aa29.89■■■□□ 2.37
TM6SF1-204ENST00000379390 ARID4AP29374 1257 aaPredicted RBP29.89■■■□□ 2.37
TM6SF1-204ENST00000379390 RASGRF1Q13972 1273 aa29.88■■■□□ 2.37
TM6SF1-204ENST00000379390 PI16Q6UXB8 463 aa29.88■■■□□ 2.37
TM6SF1-204ENST00000379390 NIM1KQ8IY84 436 aa29.88■■■□□ 2.37
TM6SF1-204ENST00000379390 GNL3LQ9NVN8 582 aaKnown RBP29.88■■■□□ 2.37
TM6SF1-204ENST00000379390 TTC41PQ6P2S7 1318 aa29.88■■■□□ 2.37
TM6SF1-204ENST00000379390 FRAT2O75474 233 aaPredicted RBP29.87■■■□□ 2.37
TM6SF1-204ENST00000379390 IL1R1P14778 569 aa29.87■■■□□ 2.37
TM6SF1-204ENST00000379390 MCAMP43121 646 aa29.87■■■□□ 2.37
TM6SF1-204ENST00000379390 STAP2Q9UGK3 403 aa29.87■■■□□ 2.37
TM6SF1-204ENST00000379390 UQCRFS1P1P0C7P4 283 aa29.86■■■□□ 2.37
TM6SF1-204ENST00000379390 TDRD7Q8NHU6 1098 aaKnown RBP29.86■■■□□ 2.37
TM6SF1-204ENST00000379390 PI4K2BQ8TCG2 481 aa29.86■■■□□ 2.37
TM6SF1-204ENST00000379390 JAG2Q9Y219 1238 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms