RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 GOLGA6DP0CG33 693 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 RAB11FIP4Q86YS3 637 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 GPR161Q8N6U8 529 aaKnown RBP12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 GOLGA6AQ9NYA3 693 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 CPLX3Q8WVH0 158 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 FAM204AQ9H8W3 233 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 UTP14CQ5TAP6 766 aaKnown RBP12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 ITIH3Q06033 890 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 ESR2Q92731 530 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 IPO4Q8TEX9 1081 aaKnown RBP12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 FRMD4BQ9Y2L6 1034 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 RTL9Q8NET4 1388 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 NCOA2Q15596 1464 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 PKNOX2Q96KN3 472 aa12.66□□□□□ -0.38
PTCHD1-201ENST00000379361 CEP120Q8N960 986 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 ANKFY1Q9P2R3 1169 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 TMEM110-MUSTN1A8MSY1 372 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 NAPAP54920 295 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 DDX19AQ9NUU7 478 aaKnown RBP12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 SYKP43405 635 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 PICK1Q9NRD5 415 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 CETN3O15182 167 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 IARSP41252 1262 aaKnown RBP12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 SELENOSQ9BQE4 189 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 BACH1O14867 736 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 CFAP70Q5T0N1 1121 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 SETDB2Q96T68 719 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 TRMT1Q9NXH9 659 aaKnown RBP12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 HAUS8Q9BT25 410 aa12.65□□□□□ -0.38
PTCHD1-201ENST00000379361 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.39
PTCHD1-201ENST00000379361 WDR46O15213 610 aaKnown RBP12.65□□□□□ -0.39
PTCHD1-201ENST00000379361 HOOK2Q96ED9 719 aa12.65□□□□□ -0.39
PTCHD1-201ENST00000379361 NYXQ9GZU5 481 aa12.65□□□□□ -0.39
PTCHD1-201ENST00000379361 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.39
PTCHD1-201ENST00000379361 ATP2C2O75185 946 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 RRS1Q15050 365 aaKnown RBP12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 NBPF14Q5TI25 921 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 SPAG1Q07617 926 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 PROCA1Q8NCQ7 364 aaPredicted RBP12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 CD2APQ9Y5K6 639 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 ERBINQ96RT1 1412 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 DNAJC21Q5F1R6 531 aaKnown RBP12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 NEK11Q8NG66 645 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 PAXBP1Q9Y5B6 917 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 CCT6AP40227 531 aaKnown RBP12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 SEPT14Q6ZU15 432 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 USP16Q9Y5T5 823 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 C16orf45Q96MC5 204 aaPredicted RBP12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 SPOUT1Q5T280 376 aaKnown RBP12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 FNBP1Q96RU3 617 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 NAP1L4Q99733 375 aaKnown RBP12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 HEATR3Q7Z4Q2 680 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 SDK1Q7Z5N4 2213 aa12.64□□□□□ -0.39
PTCHD1-201ENST00000379361 TRPC3Q13507 836 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 AFG3L2Q9Y4W6 797 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 DAPK3O43293 454 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 MROH2BQ7Z745 1585 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 STRN3Q13033 797 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 SNW1Q13573 536 aaKnown RBP12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 CCDC170Q8IYT3 715 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 STMN1P16949 149 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 RRAGBQ5VZM2 374 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 KRT5P13647 590 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 SPC25Q9HBM1 224 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 FGD6Q6ZV73 1430 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 GNA11P29992 359 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 GNG11P61952 73 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 CCT2P78371 535 aaKnown RBP12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 NOX5Q96PH1 765 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 PTPRCP08575 1304 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 CTAGE15A4D2H0 777 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 CTAGE8P0CG41 777 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 SLC4A8Q2Y0W8 1093 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 CTAGE6Q86UF2 777 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 CTAGE4Q8IX94 777 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 GBP7Q8N8V2 638 aaPredicted RBP12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 MTUS1Q9ULD2 1270 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 STK24Q9Y6E0 443 aa12.63□□□□□ -0.39
PTCHD1-201ENST00000379361 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 CCDC141Q6ZP82 1450 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 ZC3H6P61129 1189 aaKnown RBP12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 CACNA2D3Q8IZS8 1091 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 GPATCH11Q8N954 259 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 PRR16Q569H4 304 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 TMX1Q9H3N1 280 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 ESPNB1AK53 854 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 GBP1P32455 592 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 NAA16Q6N069 864 aaPredicted RBP12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 ATRIPQ8WXE1 791 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 SETSIPP0DME0 302 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 XRCC6P12956 609 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 ATP11AP98196 1134 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 GNAT2P19087 354 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 KRT83P78385 493 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 GUCY1B3Q02153 619 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms