RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 QTRT2Q9H974 415 aaKnown RBP13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 CHPF2Q9P2E5 772 aa13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 NSFL1CQ9UNZ2 370 aaKnown RBP13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 ADGRL1O94910 1474 aa13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 TYRO3Q06418 890 aa13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 CKAP4Q07065 602 aaKnown RBP13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 NMIQ13287 307 aaPredicted RBP13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 MRPS27Q92552 414 aaKnown RBP13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 VPS18Q9P253 973 aa13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 UBE3BQ7Z3V4 1068 aa13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 MICALL1Q8N3F8 863 aa13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 ZC3H12CQ9C0D7 883 aaKnown RBP13.66□□□□□ -0.22
PCDHA9-201ENST00000378122 SPECC1LQ69YQ0 1117 aa13.65□□□□□ -0.22
PCDHA9-201ENST00000378122 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
PCDHA9-201ENST00000378122 PRC1O43663 620 aa13.65□□□□□ -0.22
PCDHA9-201ENST00000378122 C8orf58Q8NAV2 365 aa13.65□□□□□ -0.22
PCDHA9-201ENST00000378122 GOLGA1Q92805 767 aa13.65□□□□□ -0.22
PCDHA9-201ENST00000378122 EHBP1Q8NDI1 1231 aa13.65□□□□□ -0.22
PCDHA9-201ENST00000378122 ARHGAP45Q92619 1136 aa13.65□□□□□ -0.22
PCDHA9-201ENST00000378122 AK2P54819 239 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 KIF22Q14807 665 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 KCNG4Q8TDN1 519 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 CEP63Q96MT8 703 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 EHMT1Q9H9B1 1298 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 RMND1Q9NWS8 449 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 ANKRD44Q8N8A2 993 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 SIRT1Q96EB6 747 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 TSPY2A6NKD2 308 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 CTNNA2P26232 953 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 STAT6P42226 847 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 PYM1Q9BRP8 204 aaKnown RBP13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 OGFRQ9NZT2 677 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 ZBTB21Q9ULJ3 1066 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 SMC5Q8IY18 1101 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 CTAGE1Q96RT6 745 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 KARSQ15046 597 aaKnown RBP13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 CDCA7Q9BWT1 371 aaPredicted RBP13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 CAPN2P17655 700 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 KIF5BP33176 963 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 NLRP3Q96P20 1036 aa13.64□□□□□ -0.23
PCDHA9-201ENST00000378122 STK25O00506 426 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 HSPA4P34932 840 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 HS1BP3Q53T59 392 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 CAPZA3Q96KX2 299 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 RLBP1P12271 317 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 WTAPQ15007 396 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 TTC31Q49AM3 519 aaPredicted RBP13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 HOOK3Q86VS8 718 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 LARGE2Q8N3Y3 721 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 UBA7P41226 1012 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 LPXNO60711 386 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 SYT10Q6XYQ8 523 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 FERMT2Q96AC1 680 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 BICD1Q96G01 975 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 CTAGE9A4FU28 777 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 MCMDC2Q4G0Z9 681 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 LDHAL6AQ6ZMR3 332 aa13.63□□□□□ -0.23
PCDHA9-201ENST00000378122 ATP8B2P98198 1209 aa13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 CHST3Q7LGC8 479 aa13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 SMAP1Q8IYB5 467 aaPredicted RBP13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 ZBTB43O43298 467 aa13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 H0YIN7 160 aa13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 SYCP3Q8IZU3 236 aa13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 PICK1Q9NRD5 415 aa13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 ITSN2Q9NZM3 1697 aa13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 HOMER2Q9NSB8 354 aa13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 CYLC1P35663 651 aaPredicted RBP13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 MKRN3Q13064 507 aaKnown RBP13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 DHX58Q96C10 678 aa13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 C14orf93Q9H972 538 aaKnown RBP13.62□□□□□ -0.23
PCDHA9-201ENST00000378122 PDE4BQ07343 736 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 RGS22Q8NE09 1264 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 PA2G4Q9UQ80 394 aaKnown RBP13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 TNRQ92752 1358 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 STAMBPO95630 424 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 GTF3C6Q969F1 213 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 EIF2AK4Q9P2K8 1649 aaKnown RBP13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 AKR1B10O60218 316 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 BAG3O95817 575 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 APOBRQ0VD83 1088 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 RBSNQ9H1K0 784 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 FAM170AA1A519 330 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 OPA1O60313 960 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 BIRC2Q13490 618 aa13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 PAIP2Q9BPZ3 127 aaKnown RBP13.61□□□□□ -0.23
PCDHA9-201ENST00000378122 IFI16Q16666 785 aaKnown RBP13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 CCDC152Q4G0S7 254 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 IFIT1BQ5T764 474 aaKnown RBP13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 IFNKQ9P0W0 207 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 RTN1Q16799 776 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 SLC4A4Q9Y6R1 1079 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 SLC39A6Q13433 755 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 ZYXQ15942 572 aaKnown RBP13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 NBPF11Q86T75 865 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 KRT23Q9C075 422 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 BIVM-ERCC5R4GMW8 1640 aa13.6□□□□□ -0.23
PCDHA9-201ENST00000378122 CEP85Q6P2H3 762 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms