RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 KAZALD1Q96I82 304 aa14.53□□□□□ -0.08
SMARCE1-203ENST00000377808 COA1Q9GZY4 146 aa14.53□□□□□ -0.08
SMARCE1-203ENST00000377808 USP44Q9H0E7 712 aa14.53□□□□□ -0.08
SMARCE1-203ENST00000377808 TRAF5O00463 557 aa14.52□□□□□ -0.08
SMARCE1-203ENST00000377808 UBTFL1P0CB47 393 aaPredicted RBP14.52□□□□□ -0.08
SMARCE1-203ENST00000377808 HIRAP54198 1017 aaPredicted RBP14.52□□□□□ -0.08
SMARCE1-203ENST00000377808 FMR1Q06787 632 aaKnown RBP eCLIP14.52□□□□□ -0.08
SMARCE1-203ENST00000377808 KIF4BQ2VIQ3 1234 aa14.52□□□□□ -0.08
SMARCE1-203ENST00000377808 ANKRD44Q8N8A2 993 aa14.52□□□□□ -0.08
SMARCE1-203ENST00000377808 GLIS2Q9BZE0 524 aaPredicted RBP14.52□□□□□ -0.08
SMARCE1-203ENST00000377808 ZNF408Q9H9D4 720 aa14.52□□□□□ -0.08
SMARCE1-203ENST00000377808 ABT1Q9ULW3 272 aaKnown RBP14.52□□□□□ -0.08
SMARCE1-203ENST00000377808 BCAR3O75815 825 aa14.51□□□□□ -0.09
SMARCE1-203ENST00000377808 EGFRP00533 1210 aa14.51□□□□□ -0.09
SMARCE1-203ENST00000377808 AGBL3Q8NEM8 1001 aa14.51□□□□□ -0.09
SMARCE1-203ENST00000377808 MXD3Q9BW11 206 aa14.51□□□□□ -0.09
SMARCE1-203ENST00000377808 PUS3Q9BZE2 481 aaKnown RBP14.51□□□□□ -0.09
SMARCE1-203ENST00000377808 IPO8O15397 1037 aaKnown RBP14.5□□□□□ -0.09
SMARCE1-203ENST00000377808 BRPF1P55201 1214 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-203ENST00000377808 RABL6Q3YEC7 729 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-203ENST00000377808 METTL24Q5JXM2 366 aa14.5□□□□□ -0.09
SMARCE1-203ENST00000377808 PAXIP1Q6ZW49 1069 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-203ENST00000377808 ZNF804AQ7Z570 1209 aa14.5□□□□□ -0.09
SMARCE1-203ENST00000377808 KLHDC4Q8TBB5 520 aa14.5□□□□□ -0.09
SMARCE1-203ENST00000377808 USP17L8P0C7I0 530 aa14.49□□□□□ -0.09
SMARCE1-203ENST00000377808 GTF2IP78347 998 aa14.49□□□□□ -0.09
SMARCE1-203ENST00000377808 TTLL5Q6EMB2 1281 aa14.49□□□□□ -0.09
SMARCE1-203ENST00000377808 ZC3H15Q8WU90 426 aaKnown RBP14.49□□□□□ -0.09
SMARCE1-203ENST00000377808 DCPSQ96C86 337 aaKnown RBP14.49□□□□□ -0.09
SMARCE1-203ENST00000377808 CD209Q9NNX6 404 aa14.49□□□□□ -0.09
SMARCE1-203ENST00000377808 ZBED9Q6R2W3 1325 aa14.49□□□□□ -0.09
SMARCE1-203ENST00000377808 A0A1B0GUL6 1792 aa14.49□□□□□ -0.09
SMARCE1-203ENST00000377808 CELF2O95319 508 aaKnown RBP14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 GRM1Q13255 1194 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 LRRC24Q50LG9 513 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 DACT2Q5SW24 774 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 STRIP1Q5VSL9 837 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 CDC37L1Q7L3B6 337 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 USP48Q86UV5 1035 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 OGFOD1Q8N543 542 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 ARHGAP45Q92619 1136 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 CLUAP1Q96AJ1 413 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 GGA3Q9NZ52 723 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 JAG2Q9Y219 1238 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 MROH5Q6ZUA9 1318 aa14.48□□□□□ -0.09
SMARCE1-203ENST00000377808 PSME4Q14997 1843 aa14.47□□□□□ -0.09
SMARCE1-203ENST00000377808 CNTNAP1P78357 1384 aa14.47□□□□□ -0.09
SMARCE1-203ENST00000377808 MYO3BQ8WXR4 1341 aa14.47□□□□□ -0.09
SMARCE1-203ENST00000377808 ATF7IPQ6VMQ6 1270 aa14.47□□□□□ -0.09
SMARCE1-203ENST00000377808 KRT26Q7Z3Y9 468 aa14.47□□□□□ -0.09
SMARCE1-203ENST00000377808 KIAA0825Q8IV33 1275 aa14.47□□□□□ -0.09
SMARCE1-203ENST00000377808 MEIS3Q99687 375 aa14.47□□□□□ -0.09
SMARCE1-203ENST00000377808 MYOZ2Q9NPC6 264 aa14.47□□□□□ -0.09
SMARCE1-203ENST00000377808 HDAC5Q9UQL6 1122 aa14.47□□□□□ -0.09
SMARCE1-203ENST00000377808 LRRFIP2Q9Y608 721 aaKnown RBP14.47□□□□□ -0.09
SMARCE1-203ENST00000377808 ADM5C9JUS6 153 aa14.46□□□□□ -0.09
SMARCE1-203ENST00000377808 TRIM27P14373 513 aa14.46□□□□□ -0.09
SMARCE1-203ENST00000377808 ZNF280AP59817 542 aaPredicted RBP14.46□□□□□ -0.09
SMARCE1-203ENST00000377808 SCARF1Q14162 830 aa14.46□□□□□ -0.09
SMARCE1-203ENST00000377808 VPS37DQ86XT2 251 aa14.46□□□□□ -0.09
SMARCE1-203ENST00000377808 SIL1Q9H173 461 aa14.46□□□□□ -0.09
SMARCE1-203ENST00000377808 PGAP2Q9UHJ9 254 aa14.46□□□□□ -0.09
SMARCE1-203ENST00000377808 TNNQ9UQP3 1299 aa14.46□□□□□ -0.09
SMARCE1-203ENST00000377808 ASTN2O75129 1339 aaPredicted RBP14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 F8W031 263 aaPredicted RBP14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 GYG1P46976 350 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 UBE4AQ14139 1066 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 DEFB115Q30KQ5 88 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 ANGEL2Q5VTE6 544 aaKnown RBP14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 ZKSCAN2Q63HK3 967 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 DLK2Q6UY11 383 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 C15orf52Q6ZUT6 534 aaKnown RBP14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 SULF1Q8IWU6 871 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 JMYQ8N9B5 988 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 GMLQ99445 158 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 HDAC9Q9UKV0 1011 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 RIPOR2Q9Y4F9 1068 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 ZNF609O15014 1411 aa14.45□□□□□ -0.1
SMARCE1-203ENST00000377808 IRS2Q9Y4H2 1338 aa14.44□□□□□ -0.1
SMARCE1-203ENST00000377808 FRAT2O75474 233 aaPredicted RBP14.44□□□□□ -0.1
SMARCE1-203ENST00000377808 GNAI3P08754 354 aa14.44□□□□□ -0.1
SMARCE1-203ENST00000377808 HIBADHP31937 336 aaKnown RBP14.44□□□□□ -0.1
SMARCE1-203ENST00000377808 VEGFBP49765 207 aa14.44□□□□□ -0.1
SMARCE1-203ENST00000377808 CST9Q5W186 159 aa14.44□□□□□ -0.1
SMARCE1-203ENST00000377808 INTS3Q68E01 1043 aaKnown RBP14.44□□□□□ -0.1
SMARCE1-203ENST00000377808 FTSJ3Q8IY81 847 aaKnown RBP14.44□□□□□ -0.1
SMARCE1-203ENST00000377808 TRPM7Q96QT4 1865 aa14.44□□□□□ -0.1
SMARCE1-203ENST00000377808 EYA2O00167 538 aa14.43□□□□□ -0.1
SMARCE1-203ENST00000377808 SASH1O94885 1247 aa14.43□□□□□ -0.1
SMARCE1-203ENST00000377808 IL1R1P14778 569 aa14.43□□□□□ -0.1
SMARCE1-203ENST00000377808 CAVIN4Q5BKX8 364 aa14.43□□□□□ -0.1
SMARCE1-203ENST00000377808 SCAF8Q9UPN6 1271 aaKnown RBP14.43□□□□□ -0.1
SMARCE1-203ENST00000377808 RASSF10A6NK89 507 aa14.42□□□□□ -0.1
SMARCE1-203ENST00000377808 PDE8BO95263 885 aa14.42□□□□□ -0.1
SMARCE1-203ENST00000377808 IFIT1P09914 478 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-203ENST00000377808 HSPA1AP0DMV8 641 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-203ENST00000377808 HSPA1BP0DMV9 641 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-203ENST00000377808 RFX5P48382 616 aaPredicted RBP14.42□□□□□ -0.1
SMARCE1-203ENST00000377808 PTPN12Q05209 780 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-203ENST00000377808 CHAF1AQ13111 956 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms