RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 CAMK4Q16566 473 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 CCDC57Q2TAC2 916 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 LRRFIP1Q32MZ4 808 aaKnown RBP13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 OSBP2Q969R2 916 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 DDX11Q96FC9 970 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 ZNF830Q96NB3 372 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 CCDC9Q9Y3X0 531 aaKnown RBP13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 KIF3AQ9Y496 699 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 M0R2C6 588 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 CAVIN2O95810 425 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 PDIA3P30101 505 aaKnown RBP13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 FGD1P98174 961 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 APOBRQ0VD83 1088 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 TEX13AQ9BXU3 409 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 A0A0G2JLW4 131 aa13.83□□□□□ -0.2
TNFRSF9-201ENST00000377507 PTPDC1A2A3K4 754 aa13.83□□□□□ -0.2
TNFRSF9-201ENST00000377507 FOXP2O15409 715 aa13.83□□□□□ -0.2
TNFRSF9-201ENST00000377507 CCDC158Q5M9N0 1113 aa13.83□□□□□ -0.2
TNFRSF9-201ENST00000377507 XAGE2Q96GT9 111 aa13.83□□□□□ -0.2
TNFRSF9-201ENST00000377507 CTNNA3Q9UI47 895 aa13.83□□□□□ -0.2
TNFRSF9-201ENST00000377507 ZBTB38Q8NAP3 1195 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 KIAA1524Q8TCG1 905 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 CBX8Q9HC52 389 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 TOGARAM1Q9Y4F4 1720 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 UQCRHLA0A096LP55 91 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 DYNC1I1O14576 645 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 UQCRHP07919 91 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 ANO6Q4KMQ2 910 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 CKAP2LQ8IYA6 745 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 TDRD7Q8NHU6 1098 aaKnown RBP13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 PDCL3Q9H2J4 239 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 KCNF1Q9H3M0 494 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 SLAIN2Q9P270 581 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 ABCA3Q99758 1704 aa13.82□□□□□ -0.2
TNFRSF9-201ENST00000377507 CDHR2Q9BYE9 1310 aa13.81□□□□□ -0.2
TNFRSF9-201ENST00000377507 GOLGA6L6A8MZA4 724 aa13.81□□□□□ -0.2
TNFRSF9-201ENST00000377507 ADORA1P30542 326 aa13.81□□□□□ -0.2
TNFRSF9-201ENST00000377507 TTLL5Q6EMB2 1281 aa13.81□□□□□ -0.2
TNFRSF9-201ENST00000377507 LUZP1Q86V48 1076 aa13.81□□□□□ -0.2
TNFRSF9-201ENST00000377507 MPNDQ8N594 471 aa13.81□□□□□ -0.2
TNFRSF9-201ENST00000377507 BICD2Q8TD16 824 aa13.81□□□□□ -0.2
TNFRSF9-201ENST00000377507 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
TNFRSF9-201ENST00000377507 CTAGE5O15320 804 aa13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 CCT2P78371 535 aaKnown RBP13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 FKBP4Q02790 459 aaKnown RBP eCLIP13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 TTC39AQ5SRH9 613 aa13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 APPBP2Q92624 585 aa13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 ZNF512BQ96KM6 892 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 PRIMPOLQ96LW4 560 aa13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 MYH15Q9Y2K3 1946 aa13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 ILDR1Q86SU0 546 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 PLA2G4DQ86XP0 818 aa13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 RGS22Q8NE09 1264 aa13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 UBE2Q2Q8WVN8 375 aa13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 ZNF396Q96N95 335 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 RIPOR2Q9Y4F9 1068 aa13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 NWD2Q9ULI1 1742 aa13.8□□□□□ -0.2
TNFRSF9-201ENST00000377507 MAP3K15Q6ZN16 1313 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 WDR19Q8NEZ3 1342 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 FGAP02671 866 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 IFIT5Q13325 482 aaKnown RBP13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 SCARF1Q14162 830 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 IMMTQ16891 758 aaKnown RBP13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 GIGYF2Q6Y7W6 1299 aaKnown RBP13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 DNAJC10Q8IXB1 793 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 ENGASEQ8NFI3 743 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 MYRIPQ8NFW9 859 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 PIGBQ92521 554 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 FAM89AQ96GI7 184 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 USP28Q96RU2 1077 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 NCOA5Q9HCD5 579 aaKnown RBP13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 CARMIL3Q8ND23 1372 aa13.79□□□□□ -0.2
TNFRSF9-201ENST00000377507 RIC1Q4ADV7 1423 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 ZNF165P49910 485 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 GORABQ5T7V8 394 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 MB21D2Q8IYB1 491 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 ASAP1Q9ULH1 1129 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 STARD3NLO95772 234 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 GTF2F1P35269 517 aaKnown RBP eCLIP13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 ZAP70P43403 619 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 ZNF75DP51815 510 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 HSPA2P54652 639 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 EVA1CP58658 441 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 CHST3Q7LGC8 479 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 CCAR1Q8IX12 1150 aaKnown RBP13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 MAP7D2Q96T17 732 aa13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 PUS7LQ9H0K6 701 aaKnown RBP13.78□□□□□ -0.2
TNFRSF9-201ENST00000377507 IQCB1Q15051 598 aa13.77□□□□□ -0.21
TNFRSF9-201ENST00000377507 NLRP10Q86W26 655 aa13.77□□□□□ -0.21
TNFRSF9-201ENST00000377507 TTLL11Q8NHH1 800 aa13.77□□□□□ -0.21
TNFRSF9-201ENST00000377507 GOLPH3LQ9H4A5 285 aa13.77□□□□□ -0.21
TNFRSF9-201ENST00000377507 STRN4Q9NRL3 753 aa13.77□□□□□ -0.21
TNFRSF9-201ENST00000377507 RTEL1Q9NZ71 1219 aa13.77□□□□□ -0.21
TNFRSF9-201ENST00000377507 PYCARDQ9ULZ3 195 aa13.77□□□□□ -0.21
TNFRSF9-201ENST00000377507 HPS5Q9UPZ3 1129 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms