RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 MCOLN1Q9GZU1 580 aa24.56■■□□□ 1.52
CBWD3-204ENST00000377349 MYOZ2Q9NPC6 264 aa24.56■■□□□ 1.52
CBWD3-204ENST00000377349 USP17L8P0C7I0 530 aa24.55■■□□□ 1.52
CBWD3-204ENST00000377349 CASP7P55210 303 aa24.55■■□□□ 1.52
CBWD3-204ENST00000377349 NEXNQ0ZGT2 675 aa24.55■■□□□ 1.52
CBWD3-204ENST00000377349 UBE3BQ7Z3V4 1068 aa24.55■■□□□ 1.52
CBWD3-204ENST00000377349 IL16Q14005 1332 aa24.55■■□□□ 1.52
CBWD3-204ENST00000377349 SLC4A2P04920 1241 aa24.54■■□□□ 1.52
CBWD3-204ENST00000377349 SLC10A3P09131 477 aa24.54■■□□□ 1.52
CBWD3-204ENST00000377349 CCT4P50991 539 aaKnown RBP24.54■■□□□ 1.52
CBWD3-204ENST00000377349 ZNF157P51786 506 aaPredicted RBP24.54■■□□□ 1.52
CBWD3-204ENST00000377349 KIF23Q02241 960 aaPredicted RBP24.54■■□□□ 1.52
CBWD3-204ENST00000377349 CCDC102AQ96A19 550 aa24.54■■□□□ 1.52
CBWD3-204ENST00000377349 TNRC18O15417 2968 aaPredicted RBP24.54■■□□□ 1.52
CBWD3-204ENST00000377349 PITPNM2Q9BZ72 1349 aa24.54■■□□□ 1.52
CBWD3-204ENST00000377349 CCDC85CA6NKD9 419 aa24.53■■□□□ 1.52
CBWD3-204ENST00000377349 DACT2Q5SW24 774 aa24.53■■□□□ 1.52
CBWD3-204ENST00000377349 TXNRD3Q86VQ6 643 aa24.53■■□□□ 1.52
CBWD3-204ENST00000377349 MXD3Q9BW11 206 aa24.53■■□□□ 1.52
CBWD3-204ENST00000377349 PLA2G12BQ9BX93 195 aa24.53■■□□□ 1.52
CBWD3-204ENST00000377349 GCKRQ14397 625 aa24.52■■□□□ 1.52
CBWD3-204ENST00000377349 FAM161AQ3B820 660 aa24.52■■□□□ 1.52
CBWD3-204ENST00000377349 SCAF8Q9UPN6 1271 aaKnown RBP24.52■■□□□ 1.52
CBWD3-204ENST00000377349 ECM29Q5VYK3 1845 aa24.52■■□□□ 1.52
CBWD3-204ENST00000377349 RGS19P49795 217 aa24.52■■□□□ 1.52
CBWD3-204ENST00000377349 FLIIQ13045 1269 aa24.52■■□□□ 1.52
CBWD3-204ENST00000377349 NCBP3Q53F19 620 aaKnown RBP24.52■■□□□ 1.52
CBWD3-204ENST00000377349 SAGE1Q9NXZ1 904 aa24.52■■□□□ 1.52
CBWD3-204ENST00000377349 PDE4DIPQ5VU43 2346 aa24.51■■□□□ 1.51
CBWD3-204ENST00000377349 FANCIQ9NVI1 1328 aa24.51■■□□□ 1.51
CBWD3-204ENST00000377349 KLRK1P26718 216 aa24.51■■□□□ 1.51
CBWD3-204ENST00000377349 NBPF9Q3BBW0 867 aa24.5■■□□□ 1.51
CBWD3-204ENST00000377349 RASAL3Q86YV0 1011 aa24.5■■□□□ 1.51
CBWD3-204ENST00000377349 CSRNP1Q96S65 589 aa24.5■■□□□ 1.51
CBWD3-204ENST00000377349 RNF186Q9NXI6 227 aa24.5■■□□□ 1.51
CBWD3-204ENST00000377349 CSF1RP07333 972 aa24.49■■□□□ 1.51
CBWD3-204ENST00000377349 ITGA6P23229 1130 aa24.49■■□□□ 1.51
CBWD3-204ENST00000377349 COA1Q9GZY4 146 aa24.49■■□□□ 1.51
CBWD3-204ENST00000377349 FKBP1BP68106 108 aa24.48■■□□□ 1.51
CBWD3-204ENST00000377349 DGKZQ13574 1117 aa24.48■■□□□ 1.51
CBWD3-204ENST00000377349 STRIP1Q5VSL9 837 aa24.48■■□□□ 1.51
CBWD3-204ENST00000377349 MOB2Q70IA6 237 aa24.48■■□□□ 1.51
CBWD3-204ENST00000377349 LEMD3Q9Y2U8 911 aa24.48■■□□□ 1.51
CBWD3-204ENST00000377349 IGHMBP2P38935 993 aaKnown RBP24.47■■□□□ 1.51
CBWD3-204ENST00000377349 DNAAF4Q8WXU2 420 aa24.47■■□□□ 1.51
CBWD3-204ENST00000377349 IRS2Q9Y4H2 1338 aa24.47■■□□□ 1.51
CBWD3-204ENST00000377349 WNT10BO00744 389 aa24.46■■□□□ 1.51
CBWD3-204ENST00000377349 VAMP4O75379 141 aa24.46■■□□□ 1.51
CBWD3-204ENST00000377349 TRPA1O75762 1119 aa24.46■■□□□ 1.51
CBWD3-204ENST00000377349 LINS1Q8NG48 757 aa24.46■■□□□ 1.51
CBWD3-204ENST00000377349 ZNF804BA4D1E1 1349 aa24.46■■□□□ 1.51
CBWD3-204ENST00000377349 FKBP5Q13451 457 aaPredicted RBP24.45■■□□□ 1.51
CBWD3-204ENST00000377349 PRAMEF18Q5VWM3 479 aa24.45■■□□□ 1.51
CBWD3-204ENST00000377349 MYO3BQ8WXR4 1341 aa24.45■■□□□ 1.5
CBWD3-204ENST00000377349 ANKRD2Q9GZV1 360 aa24.44■■□□□ 1.5
CBWD3-204ENST00000377349 MYH16Q9H6N6 1097 aa24.44■■□□□ 1.5
CBWD3-204ENST00000377349 LAMB1P07942 1786 aa24.43■■□□□ 1.5
CBWD3-204ENST00000377349 FBXW7Q969H0 707 aa24.43■■□□□ 1.5
CBWD3-204ENST00000377349 ZBED3Q96IU2 234 aaPredicted RBP24.43■■□□□ 1.5
CBWD3-204ENST00000377349 SASH1O94885 1247 aa24.42■■□□□ 1.5
CBWD3-204ENST00000377349 FOXO4P98177 505 aa24.42■■□□□ 1.5
CBWD3-204ENST00000377349 MLLT1Q03111 559 aaPredicted RBP24.42■■□□□ 1.5
CBWD3-204ENST00000377349 CHRNDQ07001 517 aa24.42■■□□□ 1.5
CBWD3-204ENST00000377349 TTLL5Q6EMB2 1281 aa24.42■■□□□ 1.5
CBWD3-204ENST00000377349 WDR63Q8IWG1 891 aa24.42■■□□□ 1.5
CBWD3-204ENST00000377349 OGFOD1Q8N543 542 aa24.42■■□□□ 1.5
CBWD3-204ENST00000377349 MPHOSPH8Q99549 860 aa24.42■■□□□ 1.5
CBWD3-204ENST00000377349 SPINK5Q9NQ38 1064 aaPredicted RBP24.42■■□□□ 1.5
CBWD3-204ENST00000377349 UBE2Q2LH0YL09 131 aa24.41■■□□□ 1.5
CBWD3-204ENST00000377349 SNAP23O00161 211 aa24.41■■□□□ 1.5
CBWD3-204ENST00000377349 EXOSC9Q06265 439 aaKnown RBP24.41■■□□□ 1.5
CBWD3-204ENST00000377349 REM2Q8IYK8 340 aaPredicted RBP24.4■■□□□ 1.5
CBWD3-204ENST00000377349 F6X3S4 739 aa24.39■■□□□ 1.5
CBWD3-204ENST00000377349 MMP14P50281 582 aa24.39■■□□□ 1.5
CBWD3-204ENST00000377349 GTF2IP78347 998 aa24.39■■□□□ 1.5
CBWD3-204ENST00000377349 BEND3Q5T5X7 828 aa24.39■■□□□ 1.5
CBWD3-204ENST00000377349 KIAA0825Q8IV33 1275 aa24.39■■□□□ 1.5
CBWD3-204ENST00000377349 CD209Q9NNX6 404 aa24.39■■□□□ 1.5
CBWD3-204ENST00000377349 C15orf52Q6ZUT6 534 aaKnown RBP24.38■■□□□ 1.49
CBWD3-204ENST00000377349 CERS5Q8N5B7 392 aa24.38■■□□□ 1.49
CBWD3-204ENST00000377349 ANKRD18BA2A2Z9 1011 aa24.37■■□□□ 1.49
CBWD3-204ENST00000377349 TAF5LO75529 589 aa24.37■■□□□ 1.49
CBWD3-204ENST00000377349 EPHA10Q5JZY3 1008 aa24.36■■□□□ 1.49
CBWD3-204ENST00000377349 HELBQ8NG08 1087 aaPredicted RBP24.36■■□□□ 1.49
CBWD3-204ENST00000377349 ARAP2Q8WZ64 1704 aa24.36■■□□□ 1.49
CBWD3-204ENST00000377349 HTTP42858 3142 aa24.36■■□□□ 1.49
CBWD3-204ENST00000377349 KCNJ4P48050 445 aa24.35■■□□□ 1.49
CBWD3-204ENST00000377349 COL1A1P02452 1464 aaPredicted RBP24.34■■□□□ 1.49
CBWD3-204ENST00000377349 SSC5DA1L4H1 1573 aa24.34■■□□□ 1.49
CBWD3-204ENST00000377349 IFIT5Q13325 482 aaKnown RBP24.34■■□□□ 1.49
CBWD3-204ENST00000377349 APOBEC3FQ8IUX4 373 aaKnown RBP24.34■■□□□ 1.49
CBWD3-204ENST00000377349 PCDHAC2Q9Y5I4 1007 aa24.34■■□□□ 1.49
CBWD3-204ENST00000377349 TM4SF4P48230 202 aa24.33■■□□□ 1.49
CBWD3-204ENST00000377349 PTPN12Q05209 780 aaKnown RBP24.33■■□□□ 1.49
CBWD3-204ENST00000377349 TTLL12Q14166 644 aaPredicted RBP24.33■■□□□ 1.49
CBWD3-204ENST00000377349 CTU1Q7Z7A3 348 aaKnown RBP24.33■■□□□ 1.49
CBWD3-204ENST00000377349 HDAC9Q9UKV0 1011 aa24.33■■□□□ 1.49
CBWD3-204ENST00000377349 OTOFQ9HC10 1997 aa24.32■■□□□ 1.48
CBWD3-204ENST00000377349 CENPFP49454 3210 aa24.32■■□□□ 1.48
CBWD3-204ENST00000377349 IL1R1P14778 569 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms