RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CREBZFQ9NS37 354 aa27.64■■■□□ 2.02
SRM-201ENST00000376957 ADAMTSL1Q8N6G6 1762 aa27.63■■■□□ 2.01
SRM-201ENST00000376957 TRIM27P14373 513 aa27.63■■■□□ 2.01
SRM-201ENST00000376957 UBE4AQ14139 1066 aa27.63■■■□□ 2.01
SRM-201ENST00000376957 STRIP1Q5VSL9 837 aa27.63■■■□□ 2.01
SRM-201ENST00000376957 OGFOD1Q8N543 542 aa27.63■■■□□ 2.01
SRM-201ENST00000376957 WTIPA6NIX2 430 aaPredicted RBP27.62■■■□□ 2.01
SRM-201ENST00000376957 ITGBL1O95965 494 aaPredicted RBP27.62■■■□□ 2.01
SRM-201ENST00000376957 MMP14P50281 582 aa27.62■■■□□ 2.01
SRM-201ENST00000376957 PASKQ96RG2 1323 aa27.62■■■□□ 2.01
SRM-201ENST00000376957 METTL24Q5JXM2 366 aa27.61■■■□□ 2.01
SRM-201ENST00000376957 TTLL5Q6EMB2 1281 aa27.61■■■□□ 2.01
SRM-201ENST00000376957 FTSJ3Q8IY81 847 aaKnown RBP27.61■■■□□ 2.01
SRM-201ENST00000376957 TMEM88BA6NKF7 163 aa27.6■■■□□ 2.01
SRM-201ENST00000376957 USP17L8P0C7I0 530 aa27.6■■■□□ 2.01
SRM-201ENST00000376957 TXNRD3Q86VQ6 643 aa27.6■■■□□ 2.01
SRM-201ENST00000376957 CD209Q9NNX6 404 aa27.6■■■□□ 2.01
SRM-201ENST00000376957 RIPOR2Q9Y4F9 1068 aa27.6■■■□□ 2.01
SRM-201ENST00000376957 ZNF609O15014 1411 aa27.59■■■□□ 2.01
SRM-201ENST00000376957 SCN9AQ15858 1988 aa27.59■■■□□ 2.01
SRM-201ENST00000376957 RBM26Q5T8P6 1007 aaKnown RBP27.59■■■□□ 2.01
SRM-201ENST00000376957 CLUAP1Q96AJ1 413 aa27.59■■■□□ 2.01
SRM-201ENST00000376957 PUS3Q9BZE2 481 aaKnown RBP27.59■■■□□ 2.01
SRM-201ENST00000376957 FBXO3Q9UK99 471 aa27.59■■■□□ 2.01
SRM-201ENST00000376957 PSME4Q14997 1843 aa27.59■■■□□ 2.01
SRM-201ENST00000376957 KIF4BQ2VIQ3 1234 aa27.58■■■□□ 2.01
SRM-201ENST00000376957 TBC1D10BQ4KMP7 808 aaPredicted RBP27.58■■■□□ 2.01
SRM-201ENST00000376957 CDC37L1Q7L3B6 337 aa27.58■■■□□ 2.01
SRM-201ENST00000376957 SAMD7Q7Z3H4 446 aa27.58■■■□□ 2.01
SRM-201ENST00000376957 VPS37DQ86XT2 251 aa27.58■■■□□ 2.01
SRM-201ENST00000376957 DCPSQ96C86 337 aaKnown RBP27.58■■■□□ 2.01
SRM-201ENST00000376957 PGAP2Q9UHJ9 254 aa27.58■■■□□ 2.01
SRM-201ENST00000376957 LRRFIP2Q9Y608 721 aaKnown RBP27.58■■■□□ 2.01
SRM-201ENST00000376957 HTRA3P83110 453 aa27.57■■■□□ 2
SRM-201ENST00000376957 CAVIN4Q5BKX8 364 aa27.57■■■□□ 2
SRM-201ENST00000376957 KLRG1Q96E93 195 aa27.57■■■□□ 2
SRM-201ENST00000376957 MEIS3Q99687 375 aa27.57■■■□□ 2
SRM-201ENST00000376957 HDAC9Q9UKV0 1011 aa27.57■■■□□ 2
SRM-201ENST00000376957 PDE8BO95263 885 aa27.56■■■□□ 2
SRM-201ENST00000376957 KLRK1P26718 216 aa27.56■■■□□ 2
SRM-201ENST00000376957 GTF2IP78347 998 aa27.56■■■□□ 2
SRM-201ENST00000376957 DACT2Q5SW24 774 aa27.56■■■□□ 2
SRM-201ENST00000376957 DNAJC5GQ8N7S2 189 aa27.56■■■□□ 2
SRM-201ENST00000376957 TRPM4Q8TD43 1214 aa27.56■■■□□ 2
SRM-201ENST00000376957 MS4A1P11836 297 aa27.55■■■□□ 2
SRM-201ENST00000376957 HIRAP54198 1017 aaPredicted RBP27.55■■■□□ 2
SRM-201ENST00000376957 A0A1B0GUL6 1792 aa27.55■■■□□ 2
SRM-201ENST00000376957 SHTN1A0MZ66 631 aa27.54■■■□□ 2
SRM-201ENST00000376957 SNAP23O00161 211 aa27.54■■■□□ 2
SRM-201ENST00000376957 EYA2O00167 538 aa27.54■■■□□ 2
SRM-201ENST00000376957 GNAI2P04899 355 aa27.54■■■□□ 2
SRM-201ENST00000376957 IL1R1P14778 569 aa27.54■■■□□ 2
SRM-201ENST00000376957 HIBADHP31937 336 aaKnown RBP27.54■■■□□ 2
SRM-201ENST00000376957 ZNF280AP59817 542 aaPredicted RBP27.54■■■□□ 2
SRM-201ENST00000376957 LRRC24Q50LG9 513 aa27.54■■■□□ 2
SRM-201ENST00000376957 IFIT1P09914 478 aaKnown RBP27.53■■■□□ 2
SRM-201ENST00000376957 DZIP1LQ8IYY4 767 aaKnown RBP27.53■■■□□ 2
SRM-201ENST00000376957 KLHDC4Q8TBB5 520 aa27.53■■■□□ 2
SRM-201ENST00000376957 GMLQ99445 158 aa27.53■■■□□ 2
SRM-201ENST00000376957 MYOZ2Q9NPC6 264 aa27.53■■■□□ 2
SRM-201ENST00000376957 CIAO1O76071 339 aa27.52■■■□□ 2
SRM-201ENST00000376957 PTPN12Q05209 780 aaKnown RBP27.52■■■□□ 2
SRM-201ENST00000376957 PUM3Q15397 648 aaKnown RBP27.52■■■□□ 2
SRM-201ENST00000376957 ABT1Q9ULW3 272 aaKnown RBP27.52■■■□□ 2
SRM-201ENST00000376957 IRS2Q9Y4H2 1338 aa27.51■■□□□ 1.99
SRM-201ENST00000376957 FRAT2O75474 233 aaPredicted RBP27.51■■□□□ 1.99
SRM-201ENST00000376957 SASH1O94885 1247 aa27.51■■□□□ 1.99
SRM-201ENST00000376957 SULF1Q8IWU6 871 aa27.51■■□□□ 1.99
SRM-201ENST00000376957 CEP126Q9P2H0 1117 aa27.51■■□□□ 1.99
SRM-201ENST00000376957 SRGAP3O43295 1099 aa27.5■■□□□ 1.99
SRM-201ENST00000376957 RFX5P48382 616 aaPredicted RBP27.5■■□□□ 1.99
SRM-201ENST00000376957 FKBP1AP62942 108 aaKnown RBP27.5■■□□□ 1.99
SRM-201ENST00000376957 KRT26Q7Z3Y9 468 aa27.5■■□□□ 1.99
SRM-201ENST00000376957 TMEM57Q8N5G2 664 aa27.5■■□□□ 1.99
SRM-201ENST00000376957 SLC5A1P13866 664 aa27.49■■□□□ 1.99
SRM-201ENST00000376957 IL15P40933 162 aaPredicted RBP27.49■■□□□ 1.99
SRM-201ENST00000376957 ITPRIPQ8IWB1 547 aa27.49■■□□□ 1.99
SRM-201ENST00000376957 GLIS2Q9BZE0 524 aaPredicted RBP27.49■■□□□ 1.99
SRM-201ENST00000376957 GYG1P46976 350 aa27.48■■□□□ 1.99
SRM-201ENST00000376957 SCARF1Q14162 830 aa27.48■■□□□ 1.99
SRM-201ENST00000376957 KIAA0825Q8IV33 1275 aa27.48■■□□□ 1.99
SRM-201ENST00000376957 SIL1Q9H173 461 aa27.48■■□□□ 1.99
SRM-201ENST00000376957 CEP350Q5VT06 3117 aa27.48■■□□□ 1.99
SRM-201ENST00000376957 VGLL2Q8N8G2 317 aa27.47■■□□□ 1.99
SRM-201ENST00000376957 TDRD7Q8NHU6 1098 aaKnown RBP27.47■■□□□ 1.99
SRM-201ENST00000376957 LPIN2Q92539 896 aa27.47■■□□□ 1.99
SRM-201ENST00000376957 FAM84BQ96KN1 310 aaPredicted RBP27.47■■□□□ 1.99
SRM-201ENST00000376957 COPRSQ9NQ92 184 aa27.47■■□□□ 1.99
SRM-201ENST00000376957 TRAF5O00463 557 aa27.46■■□□□ 1.99
SRM-201ENST00000376957 CELF2O95319 508 aaKnown RBP27.46■■□□□ 1.99
SRM-201ENST00000376957 EGFRP00533 1210 aa27.46■■□□□ 1.99
SRM-201ENST00000376957 MTX1Q13505 466 aa27.46■■□□□ 1.99
SRM-201ENST00000376957 DEFB115Q30KQ5 88 aa27.46■■□□□ 1.99
SRM-201ENST00000376957 USP48Q86UV5 1035 aa27.46■■□□□ 1.99
SRM-201ENST00000376957 MXD3Q9BW11 206 aa27.46■■□□□ 1.99
SRM-201ENST00000376957 GGA3Q9NZ52 723 aa27.46■■□□□ 1.99
SRM-201ENST00000376957 MKRN1Q9UHC7 482 aaKnown RBP27.46■■□□□ 1.99
SRM-201ENST00000376957 TRPM7Q96QT4 1865 aa27.46■■□□□ 1.99
SRM-201ENST00000376957 ZNF408Q9H9D4 720 aa27.45■■□□□ 1.98
SRM-201ENST00000376957 TNNQ9UQP3 1299 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms