RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 C7orf25Q9BPX7 421 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 PSMA5P28066 241 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 HSPA1LP34931 641 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 CNGA2Q16280 664 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 QKIQ96PU8 341 aaKnown RBP eCLIP6.71□□□□□ -1.33
SCN2A-202ENST00000375427 SMIM23A6NLE4 172 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 KDM1AO60341 852 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 NEMFO60524 1076 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 PRIMPOLQ96LW4 560 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 URI1O94763 535 aaPredicted RBP6.71□□□□□ -1.33
SCN2A-202ENST00000375427 CAPN1P07384 714 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 TSTA3Q13630 321 aaPredicted RBP6.71□□□□□ -1.33
SCN2A-202ENST00000375427 RUFY4Q6ZNE9 571 aa6.71□□□□□ -1.33
SCN2A-202ENST00000375427 PDE9AO76083 593 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 ST13P4Q8IZP2 240 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 PHKBQ93100 1093 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 BRPF3Q9ULD4 1205 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 GIGYF1O75420 1035 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 TSPAN9O75954 239 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 C4BPBP20851 252 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 MCM2P49736 904 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 TRIML1Q8N9V2 468 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 HELLSQ9NRZ9 838 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 RNF40O75150 1001 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 KRT3P12035 628 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 BIRC5O15392 142 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 NBPF7P0C2Y1 421 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 ZC3H6P61129 1189 aaKnown RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 XPCQ01831 940 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 VPS37DQ86XT2 251 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 C6orf203Q9P0P8 240 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 CAPN11Q9UMQ6 739 aa6.71□□□□□ -1.34
SCN2A-202ENST00000375427 MYH9P35579 1960 aaKnown RBP6.71□□□□□ -1.34
SCN2A-202ENST00000375427 GTF2E1P29083 439 aaPredicted RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 C11orf88Q6PI97 169 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 POLR3CQ9BUI4 534 aaPredicted RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 MPP6Q9NZW5 540 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 SYNPO2Q9UMS6 1093 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 SPDYE4A6NLX3 237 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 KRT80Q6KB66 452 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 ZNF354CQ86Y25 554 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 MCF2L2Q86YR7 1114 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 STAG1Q8WVM7 1258 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 FSD1Q9BTV5 496 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 GAS8O95995 478 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 SERPINB6P35237 376 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TMED10P49755 219 aaKnown RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TRIM68Q6AZZ1 485 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 NFRKBQ6P4R8 1299 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 DENND6AQ8IWF6 608 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 PIP4K2CQ8TBX8 421 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 FERMT2Q96AC1 680 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 BAG5Q9UL15 447 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 PPP2R5AQ15172 486 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 ACBD5Q5T8D3 534 aaPredicted RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 CC2D2BQ6DHV5 1058 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 EFCAB13Q8IY85 973 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 RAPGEF4Q8WZA2 1011 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 ZNF330Q9Y3S2 320 aaPredicted RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 CCNB3Q8WWL7 1395 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 NINQ8N4C6 2090 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 ZEB2O60315 1214 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 MRPS35P82673 323 aaKnown RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 HOOK2Q96ED9 719 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 GRPEL1Q9HAV7 217 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 VEZTQ9HBM0 779 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TRPC6Q9Y210 931 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TUBBP07437 444 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TSHZ2Q9NRE2 1034 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TSKSQ9UJT2 592 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 ARID1AO14497 2285 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 HIP1O00291 1037 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 FCHSD2O94868 740 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 TOP1P11387 765 aaKnown RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 GABPB2Q8TAK5 448 aaPredicted RBP6.7□□□□□ -1.34
SCN2A-202ENST00000375427 OLFM1Q99784 485 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 IRAK4Q9NWZ3 460 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 CHMP2BQ9UQN3 213 aa6.7□□□□□ -1.34
SCN2A-202ENST00000375427 FLOT1O75955 427 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 CTNNA1P35221 906 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 RINLQ6ZS11 566 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 NLRP4Q96MN2 994 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 TTC1Q99614 292 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 SELENOOQ9BVL4 669 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 CDV3Q9UKY7 258 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 DEAF1O75398 565 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 CCDC186Q7Z3E2 898 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 FAM76AQ8TAV0 307 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 UPF3BQ9BZI7 483 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 PRR23D1E9PI22 279 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 XPOTO43592 962 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 PRR23D2P0DMB1 279 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 TEKT4Q8WW24 435 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 LNPKQ9C0E8 428 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 PARVBQ9HBI1 364 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 KRT82Q9NSB4 513 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 HAND2P61296 217 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 KRT83P78385 493 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 GRSF1Q12849 480 aaKnown RBP eCLIP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms