RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 EFCC1Q9HA90 598 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 MSH6P52701 1360 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 GOLGA8AA7E2F4 631 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 AKR1B15C9JRZ8 316 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-204ENST00000375290 IL1RAPL2Q9NP60 686 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 LRP2BPQ9P2M1 347 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 ABCA5Q8WWZ7 1642 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 FEZ2Q9UHY8 353 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-204ENST00000375290 ATP8B2P98198 1209 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 PANK2Q9BZ23 570 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 CCDC113Q9H0I3 377 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 GIMAP6Q6P9H5 292 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 RHPN1Q8TCX5 695 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 PARP2Q9UGN5 583 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 IKQ13123 557 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-204ENST00000375290 OSCARQ8IYS5 282 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 TRIM47Q96LD4 638 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 TSNARE1Q96NA8 513 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 GLT8D2Q9H1C3 349 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 VPS18Q9P253 973 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 MTUS1Q9ULD2 1270 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 SLC5A1P13866 664 aa11.54□□□□□ -0.56
PTCH1-204ENST00000375290 SBNO2Q9Y2G9 1366 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 PPP2R3AQ06190 1150 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 IFIT5Q13325 482 aaKnown RBP11.53□□□□□ -0.56
PTCH1-204ENST00000375290 NAPGQ99747 312 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-204ENST00000375290 GOLGA6CA6NDK9 693 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 GOLGA6DP0CG33 693 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 SKIDA1Q1XH10 827 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 MFSD6Q6ZSS7 791 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 CLSTN2Q9H4D0 955 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 GOLGA6AQ9NYA3 693 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 PHLDB2Q86SQ0 1253 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 VCX3BQ9H321 246 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 SUDS3Q9H7L9 328 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-204ENST00000375290 GOPCQ9HD26 462 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 PSDA5PKW4 1024 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-204ENST00000375290 CCDC84Q86UT8 332 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-204ENST00000375290 IQUBQ8NA54 791 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 SPTY2D1Q68D10 685 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-204ENST00000375290 ZGPATQ8N5A5 531 aaKnown RBP11.53□□□□□ -0.56
PTCH1-204ENST00000375290 ORC3Q9UBD5 711 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-204ENST00000375290 NT5C2P49902 561 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 WDR78Q5VTH9 848 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 TRIML1Q8N9V2 468 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 EVCP57679 992 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 EFCAB13Q8IY85 973 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-204ENST00000375290 MAP2K2P36507 400 aa11.53□□□□□ -0.56
PTCH1-204ENST00000375290 SEPT11Q9NVA2 429 aaKnown RBP11.53□□□□□ -0.56
PTCH1-204ENST00000375290 ATP6V1AP38606 617 aa11.52□□□□□ -0.56
PTCH1-204ENST00000375290 KDM5BQ9UGL1 1544 aa11.52□□□□□ -0.56
PTCH1-204ENST00000375290 KRBA2Q6ZNG9 492 aa11.52□□□□□ -0.56
PTCH1-204ENST00000375290 ATRIPQ8WXE1 791 aa11.52□□□□□ -0.56
PTCH1-204ENST00000375290 MAP4K4O95819 1239 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-204ENST00000375290 KLHL10Q6JEL2 608 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 SPAG5Q96R06 1193 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 NOL3O60936 208 aaKnown RBP11.52□□□□□ -0.57
PTCH1-204ENST00000375290 WHAMMP3Q1A5X7 153 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.52□□□□□ -0.57
PTCH1-204ENST00000375290 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 NUTM2FA1L443 756 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 RAD21O60216 631 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 MAP3K21Q5TCX8 1036 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 NUTM2GQ5VZR2 741 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 ESR2Q92731 530 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 A0A1W2PRG0 241 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 CALCOCO2Q13137 446 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 NDUFAB1O14561 156 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 PCDHB15Q9Y5E8 787 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 ERCC6LQ2NKX8 1250 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 CCDC40Q4G0X9 1142 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 CCDC174Q6PII3 467 aa11.52□□□□□ -0.57
PTCH1-204ENST00000375290 TMCO5BA8MYB1 307 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 FAM71BQ8TC56 605 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 SYCE1Q8N0S2 351 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 DHX32Q7L7V1 743 aaKnown RBP11.51□□□□□ -0.57
PTCH1-204ENST00000375290 CUL5Q93034 780 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 NUDT16Q96DE0 195 aaKnown RBP11.51□□□□□ -0.57
PTCH1-204ENST00000375290 STMN2Q93045 179 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 HELLSQ9NRZ9 838 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 IFIT3O14879 490 aaKnown RBP11.51□□□□□ -0.57
PTCH1-204ENST00000375290 LDHCP07864 332 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 WDR62O43379 1518 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 AFAP1Q8N556 730 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 KRI1Q8N9T8 703 aaKnown RBP11.51□□□□□ -0.57
PTCH1-204ENST00000375290 STAT6P42226 847 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 HOMER2Q9NSB8 354 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTCH1-204ENST00000375290 USP16Q9Y5T5 823 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 KIAA0232Q92628 1395 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 SLFNL1Q499Z3 407 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 AOPEPQ8N6M6 819 aa11.51□□□□□ -0.57
PTCH1-204ENST00000375290 PLCD1P51178 756 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 PAK2Q13177 524 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 ZBTB43O43298 467 aa11.5□□□□□ -0.57
PTCH1-204ENST00000375290 CTNNA2P26232 953 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms