RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 C7orf43Q8WVR3 580 aa3.31□□□□□ -1.88
CCDC7-204ENST00000375025 NIFKQ9BYG3 293 aaKnown RBP3.31□□□□□ -1.88
CCDC7-204ENST00000375025 KCNQ2O43526 872 aa3.31□□□□□ -1.88
CCDC7-204ENST00000375025 SMTNP53814 917 aa3.31□□□□□ -1.88
CCDC7-204ENST00000375025 AFAP1Q8N556 730 aa3.31□□□□□ -1.88
CCDC7-204ENST00000375025 FOXD4L4Q8WXT5 416 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-204ENST00000375025 CCDC97Q96F63 343 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-204ENST00000375025 ATP1B4Q9UN42 357 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-204ENST00000375025 STARD13Q9Y3M8 1113 aa3.31□□□□□ -1.88
CCDC7-204ENST00000375025 FYCO1Q9BQS8 1478 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 NID1P14543 1247 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 PLA2G4AP47712 749 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 LRP8Q14114 963 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 ADGRE1Q14246 886 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 TAF7LQ5H9L4 462 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 C20orf204Q6ZNR8 217 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 TNS4Q8IZW8 715 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 SIRT1Q96EB6 747 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 NACC1Q96RE7 527 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 POLR3GLQ9BT43 218 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 SPON1Q9HCB6 807 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 C10orf71Q711Q0 1435 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 TMEM2Q9UHN6 1383 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 EFCAB6Q5THR3 1501 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 THSD7AQ9UPZ6 1657 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 FAM83GA6ND36 823 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 FAM177A1Q8N128 213 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-204ENST00000375025 SSBP4Q9BWG4 385 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-204ENST00000375025 STRN4Q9NRL3 753 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 BCCIPQ9P287 314 aaKnown RBP eCLIP3.3□□□□□ -1.88
CCDC7-204ENST00000375025 WDR90Q96KV7 1748 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 NRKQ7Z2Y5 1582 aa3.3□□□□□ -1.88
CCDC7-204ENST00000375025 MST1RQ04912 1400 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 CD33P20138 364 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 TSGA10IPQ3SY00 556 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 PRRT3Q5FWE3 981 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 MARK1Q9P0L2 795 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 DOLKQ9UPQ8 538 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 PITPNM2Q9BZ72 1349 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 CLIP1P30622 1438 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 GDF10P55107 478 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 KCNA1Q09470 495 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 MAP7D1Q3KQU3 841 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 CAMKK2Q96RR4 588 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 USP21Q9UK80 565 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 EHBP1L1Q8N3D4 1523 aa3.29□□□□□ -1.88
CCDC7-204ENST00000375025 TMEM229AB2RXF0 380 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 EML1O00423 815 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 PPP1R15AO75807 674 aaPredicted RBP3.28□□□□□ -1.88
CCDC7-204ENST00000375025 APBA3O96018 575 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 KCNQ4P56696 695 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 PRSS36Q5K4E3 855 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 XRN1Q8IZH2 1706 aaKnown RBP3.28□□□□□ -1.88
CCDC7-204ENST00000375025 PLEKHG1Q9ULL1 1385 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 IRF5Q13568 498 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 NBPF1Q3BBV0 1214 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 COL13A1Q5TAT6 717 aaPredicted RBP3.28□□□□□ -1.88
CCDC7-204ENST00000375025 BRINP3Q76B58 766 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 MICALL1Q8N3F8 863 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 C19orf44Q9H6X5 657 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 GOLGA2P5Q9HBQ8 144 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 CDC42BPAQ5VT25 1732 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 MYOM1P52179 1685 aa3.28□□□□□ -1.88
CCDC7-204ENST00000375025 DCDC2BA2VCK2 349 aa3.28□□□□□ -1.89
CCDC7-204ENST00000375025 C9orf172C9J069 976 aa3.28□□□□□ -1.89
CCDC7-204ENST00000375025 KHNYNO15037 678 aaKnown RBP3.28□□□□□ -1.89
CCDC7-204ENST00000375025 STAU1O95793 577 aaKnown RBP3.28□□□□□ -1.89
CCDC7-204ENST00000375025 TATP17735 454 aaPredicted RBP3.28□□□□□ -1.89
CCDC7-204ENST00000375025 TEAD4Q15561 434 aa3.28□□□□□ -1.89
CCDC7-204ENST00000375025 DEFB132Q7Z7B7 95 aa3.28□□□□□ -1.89
CCDC7-204ENST00000375025 PROSER2Q86WR7 435 aaPredicted RBP3.28□□□□□ -1.89
CCDC7-204ENST00000375025 USP3Q9Y6I4 520 aa3.28□□□□□ -1.89
CCDC7-204ENST00000375025 CICQ96RK0 1608 aaPredicted RBP3.27□□□□□ -1.89
CCDC7-204ENST00000375025 LMTK2Q8IWU2 1503 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 A6NJY4 79 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 HYAL3O43820 417 aaPredicted RBP3.27□□□□□ -1.89
CCDC7-204ENST00000375025 ALAS2P22557 587 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 LTKP29376 864 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 EPHA4P54764 986 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 PCBP4P57723 403 aaKnown RBP3.27□□□□□ -1.89
CCDC7-204ENST00000375025 EIF4G2P78344 907 aaKnown RBP eCLIP3.27□□□□□ -1.89
CCDC7-204ENST00000375025 MBTPS1Q14703 1052 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 VPS72Q15906 364 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 SYT9Q86SS6 491 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 ZDHHC1Q8WTX9 485 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 ZNF428Q96B54 188 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 LENG1Q96BZ8 264 aaPredicted RBP3.27□□□□□ -1.89
CCDC7-204ENST00000375025 EID1Q9Y6B2 187 aa3.27□□□□□ -1.89
CCDC7-204ENST00000375025 QSER1Q2KHR3 1735 aa3.26□□□□□ -1.89
CCDC7-204ENST00000375025 SPAG9O60271 1321 aaKnown RBP3.26□□□□□ -1.89
CCDC7-204ENST00000375025 ZFYVE9O95405 1425 aa3.26□□□□□ -1.89
CCDC7-204ENST00000375025 ALBP02768 609 aa3.26□□□□□ -1.89
CCDC7-204ENST00000375025 HIRAP54198 1017 aaPredicted RBP3.26□□□□□ -1.89
CCDC7-204ENST00000375025 NRAPQ86VF7 1730 aa3.26□□□□□ -1.89
CCDC7-204ENST00000375025 RETREG2Q8NC44 543 aa3.26□□□□□ -1.89
CCDC7-204ENST00000375025 PRDM10Q9NQV6 1147 aa3.26□□□□□ -1.89
CCDC7-204ENST00000375025 TBX22Q9Y458 520 aa3.26□□□□□ -1.89
CCDC7-204ENST00000375025 PCDHGA11Q9Y5H2 935 aa3.26□□□□□ -1.89
CCDC7-204ENST00000375025 ARHGEF28Q8N1W1 1705 aaKnown RBP3.26□□□□□ -1.89
CCDC7-204ENST00000375025 RRBP1Q9P2E9 1410 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms